RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
LIMK2-203ENST00000340552 SLC26A8Q96RN1 970 aa19.19■□□□□ 0.66
LIMK2-203ENST00000340552 MFAP1P55081 439 aaKnown RBP19.18■□□□□ 0.66
LIMK2-203ENST00000340552 PCDHB15Q9Y5E8 787 aa19.18■□□□□ 0.66
LIMK2-203ENST00000340552 PDE4CQ08493 712 aa19.18■□□□□ 0.66
LIMK2-203ENST00000340552 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
LIMK2-203ENST00000340552 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
LIMK2-203ENST00000340552 MED14O60244 1454 aa19.17■□□□□ 0.66
LIMK2-203ENST00000340552 FYB1O15117 783 aa19.17■□□□□ 0.66
LIMK2-203ENST00000340552 RIMS1Q86UR5 1692 aaKnown RBP19.17■□□□□ 0.66
LIMK2-203ENST00000340552 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
LIMK2-203ENST00000340552 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
LIMK2-203ENST00000340552 ATP7BP35670 1465 aa19.16■□□□□ 0.66
LIMK2-203ENST00000340552 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
LIMK2-203ENST00000340552 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
LIMK2-203ENST00000340552 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
LIMK2-203ENST00000340552 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
LIMK2-203ENST00000340552 ANKRD26Q9UPS8 1709 aa19.15■□□□□ 0.66
LIMK2-203ENST00000340552 APAF1O14727 1248 aa19.14■□□□□ 0.65
LIMK2-203ENST00000340552 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
LIMK2-203ENST00000340552 DMTNQ08495 405 aa19.14■□□□□ 0.65
LIMK2-203ENST00000340552 GBP4Q96PP9 640 aa19.14■□□□□ 0.65
LIMK2-203ENST00000340552 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
LIMK2-203ENST00000340552 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
LIMK2-203ENST00000340552 NUDT16Q96DE0 195 aaKnown RBP19.14■□□□□ 0.65
LIMK2-203ENST00000340552 E9PSI1 815 aa19.13■□□□□ 0.65
LIMK2-203ENST00000340552 PTPRUQ92729 1446 aa19.13■□□□□ 0.65
LIMK2-203ENST00000340552 UTP14CQ5TAP6 766 aaKnown RBP19.13■□□□□ 0.65
LIMK2-203ENST00000340552 ANP32BQ92688 251 aaKnown RBP19.13■□□□□ 0.65
LIMK2-203ENST00000340552 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.13■□□□□ 0.65
LIMK2-203ENST00000340552 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
LIMK2-203ENST00000340552 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
LIMK2-203ENST00000340552 ZNF500O60304 480 aaPredicted RBP19.12■□□□□ 0.65
LIMK2-203ENST00000340552 RAB3GAP1Q15042 981 aa19.12■□□□□ 0.65
LIMK2-203ENST00000340552 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
LIMK2-203ENST00000340552 DYNC1I1O14576 645 aa19.12■□□□□ 0.65
LIMK2-203ENST00000340552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
LIMK2-203ENST00000340552 CCDC61Q9Y6R9 512 aa19.11■□□□□ 0.65
LIMK2-203ENST00000340552 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
LIMK2-203ENST00000340552 NOL7Q9UMY1 257 aaKnown RBP19.1■□□□□ 0.65
LIMK2-203ENST00000340552 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
LIMK2-203ENST00000340552 ZSCAN20P17040 1043 aaPredicted RBP19.1■□□□□ 0.65
LIMK2-203ENST00000340552 TNNQ9UQP3 1299 aa19.1■□□□□ 0.65
LIMK2-203ENST00000340552 NCKAP5LQ9HCH0 1330 aa19.1■□□□□ 0.65
LIMK2-203ENST00000340552 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
LIMK2-203ENST00000340552 SMC5Q8IY18 1101 aa19.1■□□□□ 0.65
LIMK2-203ENST00000340552 ADAMTSL3P82987 1691 aa19.09■□□□□ 0.65
LIMK2-203ENST00000340552 CIZ1Q9ULV3 898 aaPredicted RBP19.09■□□□□ 0.65
LIMK2-203ENST00000340552 RLBP1P12271 317 aa19.08■□□□□ 0.65
LIMK2-203ENST00000340552 HS1BP3Q53T59 392 aa19.08■□□□□ 0.65
LIMK2-203ENST00000340552 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
LIMK2-203ENST00000340552 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.64
LIMK2-203ENST00000340552 DIP2AQ14689 1571 aa19.08■□□□□ 0.64
LIMK2-203ENST00000340552 BBXQ8WY36 941 aaPredicted RBP19.07■□□□□ 0.64
LIMK2-203ENST00000340552 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
LIMK2-203ENST00000340552 EDC4Q6P2E9 1401 aaKnown RBP19.07■□□□□ 0.64
LIMK2-203ENST00000340552 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
LIMK2-203ENST00000340552 PTMSP20962 102 aa19.07■□□□□ 0.64
LIMK2-203ENST00000340552 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
LIMK2-203ENST00000340552 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
LIMK2-203ENST00000340552 AK9Q5TCS8 1911 aa19.06■□□□□ 0.64
LIMK2-203ENST00000340552 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
LIMK2-203ENST00000340552 GTF2E1P29083 439 aaPredicted RBP19.05■□□□□ 0.64
LIMK2-203ENST00000340552 SNX21Q969T3 373 aa19.05■□□□□ 0.64
LIMK2-203ENST00000340552 RWDD1Q9H446 243 aaPredicted RBP19.05■□□□□ 0.64
LIMK2-203ENST00000340552 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
LIMK2-203ENST00000340552 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
LIMK2-203ENST00000340552 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
LIMK2-203ENST00000340552 U2AF1L5P0DN76 240 aaPredicted RBP19.04■□□□□ 0.64
LIMK2-203ENST00000340552 U2AF1Q01081 240 aaKnown RBP eCLIP19.04■□□□□ 0.64
LIMK2-203ENST00000340552 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
LIMK2-203ENST00000340552 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 PDLIM2Q96JY6 352 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 AKAP12Q02952 1782 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 SASS6Q6UVJ0 657 aa19.03■□□□□ 0.64
LIMK2-203ENST00000340552 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.64
LIMK2-203ENST00000340552 KLHL40Q2TBA0 621 aa19.02■□□□□ 0.64
LIMK2-203ENST00000340552 DDX49Q9Y6V7 483 aaKnown RBP19.02■□□□□ 0.64
LIMK2-203ENST00000340552 NME9Q86XW9 330 aa19.02■□□□□ 0.63
LIMK2-203ENST00000340552 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.63
LIMK2-203ENST00000340552 ZKSCAN5Q9Y2L8 839 aa19.02■□□□□ 0.63
LIMK2-203ENST00000340552 ZNF142P52746 1687 aaPredicted RBP19.02■□□□□ 0.63
LIMK2-203ENST00000340552 SSFA2P28290 1259 aa19.01■□□□□ 0.63
LIMK2-203ENST00000340552 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
LIMK2-203ENST00000340552 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
LIMK2-203ENST00000340552 CSPP1Q1MSJ5 1256 aa19.01■□□□□ 0.63
LIMK2-203ENST00000340552 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
LIMK2-203ENST00000340552 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
LIMK2-203ENST00000340552 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
LIMK2-203ENST00000340552 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
LIMK2-203ENST00000340552 FBLN1P23142 703 aa19■□□□□ 0.63
LIMK2-203ENST00000340552 RARSP54136 660 aaKnown RBP19■□□□□ 0.63
LIMK2-203ENST00000340552 PPP4R3BQ5MIZ7 849 aa19■□□□□ 0.63
LIMK2-203ENST00000340552 WWC1Q8IX03 1113 aa19■□□□□ 0.63
LIMK2-203ENST00000340552 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
LIMK2-203ENST00000340552 RRP7AQ9Y3A4 280 aaKnown RBP19■□□□□ 0.63
LIMK2-203ENST00000340552 TOPAZ1Q8N9V7 1692 aa18.99■□□□□ 0.63
LIMK2-203ENST00000340552 ZNF445P59923 1031 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms