RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
SATB1-201ENST00000338745 CCDC102AQ96A19 550 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 CAMK4Q16566 473 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 SPATA32Q96LK8 384 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 STIM1Q13586 685 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 CHD1LQ86WJ1 897 aa19.75■□□□□ 0.75
SATB1-201ENST00000338745 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 PIP4K2AP48426 406 aaPredicted RBP19.74■□□□□ 0.75
SATB1-201ENST00000338745 KRT85P78386 507 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 LRRFIP2Q9Y608 721 aaKnown RBP19.74■□□□□ 0.75
SATB1-201ENST00000338745 ERLIN1O75477 346 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 WWC2Q6AWC2 1192 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 KIF21BO75037 1637 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
SATB1-201ENST00000338745 PDRG1Q9NUG6 133 aa19.73■□□□□ 0.75
SATB1-201ENST00000338745 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
SATB1-201ENST00000338745 SYCE3A1L190 88 aa19.73■□□□□ 0.75
SATB1-201ENST00000338745 JMYQ8N9B5 988 aa19.73■□□□□ 0.75
SATB1-201ENST00000338745 CWC27Q6UX04 472 aaKnown RBP19.72■□□□□ 0.75
SATB1-201ENST00000338745 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.72■□□□□ 0.75
SATB1-201ENST00000338745 CBX1P83916 185 aa19.72■□□□□ 0.75
SATB1-201ENST00000338745 KIAA1328Q86T90 577 aa19.72■□□□□ 0.75
SATB1-201ENST00000338745 GOLGA6L7A0A1B0GV03 622 aa19.71■□□□□ 0.75
SATB1-201ENST00000338745 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
SATB1-201ENST00000338745 NUP62CLQ9H1M0 184 aa19.71■□□□□ 0.75
SATB1-201ENST00000338745 RRBP1Q9P2E9 1410 aaKnown RBP19.71■□□□□ 0.75
SATB1-201ENST00000338745 RRP9O43818 475 aaKnown RBP19.71■□□□□ 0.75
SATB1-201ENST00000338745 GBP2P32456 591 aaPredicted RBP19.71■□□□□ 0.75
SATB1-201ENST00000338745 MYL6BP14649 208 aa19.7■□□□□ 0.74
SATB1-201ENST00000338745 ANKRD18AQ8IVF6 992 aa19.7■□□□□ 0.74
SATB1-201ENST00000338745 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
SATB1-201ENST00000338745 JAKMIP1Q96N16 626 aaKnown RBP19.7■□□□□ 0.74
SATB1-201ENST00000338745 LUC7LQ9NQ29 371 aaKnown RBP19.7■□□□□ 0.74
SATB1-201ENST00000338745 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
SATB1-201ENST00000338745 PDE3AQ14432 1141 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 PDCL2Q8N4E4 241 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 PDCL3Q9H2J4 239 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
SATB1-201ENST00000338745 CASQ1P31415 396 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
SATB1-201ENST00000338745 IQCEQ6IPM2 695 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 PIBF1Q8WXW3 757 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 ATF3P18847 181 aa19.69■□□□□ 0.74
SATB1-201ENST00000338745 PAF1Q8N7H5 531 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 FYCO1Q9BQS8 1478 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 PTPRGP23470 1445 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 FKBP4Q02790 459 aaKnown RBP eCLIP19.68■□□□□ 0.74
SATB1-201ENST00000338745 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 DHX8Q14562 1220 aaKnown RBP19.68■□□□□ 0.74
SATB1-201ENST00000338745 TMX1Q9H3N1 280 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
SATB1-201ENST00000338745 TAF3Q5VWG9 929 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 FILIP1Q7Z7B0 1213 aa19.68■□□□□ 0.74
SATB1-201ENST00000338745 AACSQ86V21 672 aa19.67■□□□□ 0.74
SATB1-201ENST00000338745 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
SATB1-201ENST00000338745 MCM4P33991 863 aa19.67■□□□□ 0.74
SATB1-201ENST00000338745 NLRP6P59044 892 aa19.67■□□□□ 0.74
SATB1-201ENST00000338745 CCT4P50991 539 aaKnown RBP19.67■□□□□ 0.74
SATB1-201ENST00000338745 CASTP20810 708 aaKnown RBP19.67■□□□□ 0.74
SATB1-201ENST00000338745 ESPNB1AK53 854 aa19.67■□□□□ 0.74
SATB1-201ENST00000338745 TXLNBQ8N3L3 684 aa19.67■□□□□ 0.74
SATB1-201ENST00000338745 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
SATB1-201ENST00000338745 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
SATB1-201ENST00000338745 CEP57L1Q8IYX8 460 aa19.66■□□□□ 0.74
SATB1-201ENST00000338745 CFAP45Q9UL16 551 aa19.66■□□□□ 0.74
SATB1-201ENST00000338745 MATR3P43243 847 aaKnown RBP eCLIP19.65■□□□□ 0.74
SATB1-201ENST00000338745 CCDC148Q8NFR7 591 aa19.65■□□□□ 0.74
SATB1-201ENST00000338745 SMTNL1A8MU46 457 aa19.64■□□□□ 0.74
SATB1-201ENST00000338745 EPB41L2O43491 1005 aaKnown RBP19.64■□□□□ 0.74
SATB1-201ENST00000338745 IBSPP21815 317 aaPredicted RBP19.64■□□□□ 0.73
SATB1-201ENST00000338745 NCOA2Q15596 1464 aa19.64■□□□□ 0.73
SATB1-201ENST00000338745 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
SATB1-201ENST00000338745 DDX11Q96FC9 970 aa19.63■□□□□ 0.73
SATB1-201ENST00000338745 NOL7Q9UMY1 257 aaKnown RBP19.63■□□□□ 0.73
SATB1-201ENST00000338745 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
SATB1-201ENST00000338745 BLOC1S2Q6QNY1 142 aa19.63■□□□□ 0.73
SATB1-201ENST00000338745 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
SATB1-201ENST00000338745 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
SATB1-201ENST00000338745 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
SATB1-201ENST00000338745 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
SATB1-201ENST00000338745 SCAPERQ9BY12 1400 aa19.62■□□□□ 0.73
SATB1-201ENST00000338745 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
SATB1-201ENST00000338745 ANKRD50Q9ULJ7 1429 aa19.62■□□□□ 0.73
SATB1-201ENST00000338745 SSBP05455 408 aaKnown RBP eCLIP19.61■□□□□ 0.73
SATB1-201ENST00000338745 CFAP100Q494V2 611 aa19.61■□□□□ 0.73
SATB1-201ENST00000338745 SSR1P43307 286 aaKnown RBP19.61■□□□□ 0.73
SATB1-201ENST00000338745 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
SATB1-201ENST00000338745 SOGA3Q5TF21 947 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 NACAP1Q9BZK3 213 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 EIF5P55010 431 aaKnown RBP19.6■□□□□ 0.73
SATB1-201ENST00000338745 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 ZNF397Q8NF99 534 aaPredicted RBP19.6■□□□□ 0.73
SATB1-201ENST00000338745 USP8P40818 1118 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 NUTM1Q86Y26 1132 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 PRAM1Q96QH2 718 aa19.6■□□□□ 0.73
SATB1-201ENST00000338745 CDKL5O76039 1030 aa19.59■□□□□ 0.73
SATB1-201ENST00000338745 INCENPQ9NQS7 918 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms