RNA–Protein interactions for RNA: ENST00000337738.5

PTPA-201, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-201ENST00000337738 CPSF1Q10570 1443 aaKnown RBP23.2■■□□□ 1.31
PTPA-201ENST00000337738 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
PTPA-201ENST00000337738 BRPF1P55201 1214 aaPredicted RBP23.2■■□□□ 1.3
PTPA-201ENST00000337738 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
PTPA-201ENST00000337738 COG3Q96JB2 828 aa23.2■■□□□ 1.3
PTPA-201ENST00000337738 IFT57Q9NWB7 429 aa23.2■■□□□ 1.3
PTPA-201ENST00000337738 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
PTPA-201ENST00000337738 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
PTPA-201ENST00000337738 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
PTPA-201ENST00000337738 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
PTPA-201ENST00000337738 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
PTPA-201ENST00000337738 CHMP4BQ9H444 224 aaKnown RBP23.18■■□□□ 1.3
PTPA-201ENST00000337738 METP08581 1390 aa23.18■■□□□ 1.3
PTPA-201ENST00000337738 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
PTPA-201ENST00000337738 CDK12Q9NYV4 1490 aaPredicted RBP23.18■■□□□ 1.3
PTPA-201ENST00000337738 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
PTPA-201ENST00000337738 NCKAP5LQ9HCH0 1330 aa23.17■■□□□ 1.3
PTPA-201ENST00000337738 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
PTPA-201ENST00000337738 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
PTPA-201ENST00000337738 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
PTPA-201ENST00000337738 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
PTPA-201ENST00000337738 ARHGAP45Q92619 1136 aa23.16■■□□□ 1.3
PTPA-201ENST00000337738 AATKQ6ZMQ8 1374 aa23.15■■□□□ 1.3
PTPA-201ENST00000337738 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.3
PTPA-201ENST00000337738 ANKRD45Q5TZF3 282 aa23.14■■□□□ 1.3
PTPA-201ENST00000337738 CCDC61Q9Y6R9 512 aa23.14■■□□□ 1.3
PTPA-201ENST00000337738 PTCH1Q13635 1447 aa23.13■■□□□ 1.29
PTPA-201ENST00000337738 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
PTPA-201ENST00000337738 ZNF853P0CG23 659 aa23.13■■□□□ 1.29
PTPA-201ENST00000337738 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
PTPA-201ENST00000337738 GCC1Q96CN9 775 aa23.12■■□□□ 1.29
PTPA-201ENST00000337738 CPS1P31327 1500 aa23.12■■□□□ 1.29
PTPA-201ENST00000337738 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
PTPA-201ENST00000337738 FAM83GA6ND36 823 aa23.11■■□□□ 1.29
PTPA-201ENST00000337738 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
PTPA-201ENST00000337738 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
PTPA-201ENST00000337738 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
PTPA-201ENST00000337738 DCTN1Q14203 1278 aa23.09■■□□□ 1.29
PTPA-201ENST00000337738 CHMP5Q9NZZ3 219 aa23.09■■□□□ 1.29
PTPA-201ENST00000337738 ABCC4O15439 1325 aa23.09■■□□□ 1.29
PTPA-201ENST00000337738 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
PTPA-201ENST00000337738 BMP2KLQ5H9B9 411 aa23.08■■□□□ 1.29
PTPA-201ENST00000337738 ZNF692Q9BU19 519 aaPredicted RBP23.07■■□□□ 1.28
PTPA-201ENST00000337738 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
PTPA-201ENST00000337738 RBM25P49756 843 aaKnown RBP23.06■■□□□ 1.28
PTPA-201ENST00000337738 SIRT1Q96EB6 747 aa23.06■■□□□ 1.28
PTPA-201ENST00000337738 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
PTPA-201ENST00000337738 MCM4P33991 863 aa23.05■■□□□ 1.28
PTPA-201ENST00000337738 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
PTPA-201ENST00000337738 ITSN1Q15811 1721 aa23.04■■□□□ 1.28
PTPA-201ENST00000337738 SIRT2Q8IXJ6 389 aa23.04■■□□□ 1.28
PTPA-201ENST00000337738 KNDC1Q76NI1 1749 aa23.03■■□□□ 1.28
PTPA-201ENST00000337738 TECPR2O15040 1411 aa23.03■■□□□ 1.28
PTPA-201ENST00000337738 SULT6B1Q6IMI4 303 aa23.03■■□□□ 1.28
PTPA-201ENST00000337738 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
PTPA-201ENST00000337738 C3P01024 1663 aa23.02■■□□□ 1.28
PTPA-201ENST00000337738 AKAP12Q02952 1782 aa23.02■■□□□ 1.28
PTPA-201ENST00000337738 EIF4A2Q14240 407 aaKnown RBP23.01■■□□□ 1.27
PTPA-201ENST00000337738 TNRQ92752 1358 aa23.01■■□□□ 1.27
PTPA-201ENST00000337738 NUTM2FA1L443 756 aa23■■□□□ 1.27
PTPA-201ENST00000337738 L1TD1Q5T7N2 865 aaKnown RBP23■■□□□ 1.27
PTPA-201ENST00000337738 SNX21Q969T3 373 aa23■■□□□ 1.27
PTPA-201ENST00000337738 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
PTPA-201ENST00000337738 ROBO2Q9HCK4 1378 aa22.99■■□□□ 1.27
PTPA-201ENST00000337738 TTC21BQ7Z4L5 1316 aa22.99■■□□□ 1.27
PTPA-201ENST00000337738 TBC1D9Q6ZT07 1266 aa22.99■■□□□ 1.27
PTPA-201ENST00000337738 ARXQ96QS3 562 aa22.97■■□□□ 1.27
PTPA-201ENST00000337738 ACEP12821 1306 aa22.97■■□□□ 1.27
PTPA-201ENST00000337738 KRT24Q2M2I5 525 aa22.96■■□□□ 1.27
PTPA-201ENST00000337738 MCM10Q7L590 875 aa22.96■■□□□ 1.27
PTPA-201ENST00000337738 GZF1Q9H116 711 aaPredicted RBP22.96■■□□□ 1.27
PTPA-201ENST00000337738 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
PTPA-201ENST00000337738 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
PTPA-201ENST00000337738 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
PTPA-201ENST00000337738 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.27
PTPA-201ENST00000337738 SOX12O15370 315 aa22.95■■□□□ 1.27
PTPA-201ENST00000337738 CDC45O75419 566 aa22.94■■□□□ 1.26
PTPA-201ENST00000337738 NCOA3Q9Y6Q9 1424 aa22.94■■□□□ 1.26
PTPA-201ENST00000337738 TRAK2O60296 914 aa22.94■■□□□ 1.26
PTPA-201ENST00000337738 HSP90AA1P07900 732 aaKnown RBP22.93■■□□□ 1.26
PTPA-201ENST00000337738 INTS3Q68E01 1043 aaKnown RBP22.93■■□□□ 1.26
PTPA-201ENST00000337738 PKNOX2Q96KN3 472 aa22.93■■□□□ 1.26
PTPA-201ENST00000337738 HSP90AB2PQ58FF8 381 aa22.93■■□□□ 1.26
PTPA-201ENST00000337738 CHL1O00533 1208 aa22.92■■□□□ 1.26
PTPA-201ENST00000337738 GOLGA6L3A6NEY3 463 aa22.92■■□□□ 1.26
PTPA-201ENST00000337738 KIF2CQ99661 725 aa22.92■■□□□ 1.26
PTPA-201ENST00000337738 DCTPP1Q9H773 170 aa22.92■■□□□ 1.26
PTPA-201ENST00000337738 DDX11L8A8MPP1 907 aa22.91■■□□□ 1.26
PTPA-201ENST00000337738 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
PTPA-201ENST00000337738 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
PTPA-201ENST00000337738 PLEKHM2Q8IWE5 1019 aa22.9■■□□□ 1.26
PTPA-201ENST00000337738 ADAMTS13Q76LX8 1427 aa22.9■■□□□ 1.26
PTPA-201ENST00000337738 FAM43AQ8N2R8 423 aa22.9■■□□□ 1.26
PTPA-201ENST00000337738 PLEKHG3A1L390 1219 aa22.9■■□□□ 1.26
PTPA-201ENST00000337738 GSPT1P15170 499 aaKnown RBP22.9■■□□□ 1.26
PTPA-201ENST00000337738 DDIT3P35638 169 aa22.9■■□□□ 1.26
PTPA-201ENST00000337738 USP6P35125 1406 aa22.89■■□□□ 1.26
PTPA-201ENST00000337738 FOXD4L1Q9NU39 408 aa22.89■■□□□ 1.26
PTPA-201ENST00000337738 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.25
PTPA-201ENST00000337738 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms