RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 MCM10Q7L590 875 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 MED14O60244 1454 aa18.75■□□□□ 0.59
UBA1-201ENST00000335972 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
UBA1-201ENST00000335972 MIS18AQ9NYP9 233 aa18.75■□□□□ 0.59
UBA1-201ENST00000335972 LTKP29376 864 aa18.75■□□□□ 0.59
UBA1-201ENST00000335972 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
UBA1-201ENST00000335972 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
UBA1-201ENST00000335972 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
UBA1-201ENST00000335972 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
UBA1-201ENST00000335972 ROBO2Q9HCK4 1378 aa18.74■□□□□ 0.59
UBA1-201ENST00000335972 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBA1-201ENST00000335972 C22orf23Q9BZE7 217 aa18.73■□□□□ 0.59
UBA1-201ENST00000335972 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
UBA1-201ENST00000335972 GNAI1P63096 354 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
UBA1-201ENST00000335972 APBB1O00213 710 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 ATP7BP35670 1465 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
UBA1-201ENST00000335972 ACEP12821 1306 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
UBA1-201ENST00000335972 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
UBA1-201ENST00000335972 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.59
UBA1-201ENST00000335972 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
UBA1-201ENST00000335972 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
UBA1-201ENST00000335972 SPATA31D1Q6ZQQ2 1576 aa18.7■□□□□ 0.58
UBA1-201ENST00000335972 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
UBA1-201ENST00000335972 TNRQ92752 1358 aa18.7■□□□□ 0.58
UBA1-201ENST00000335972 FOXO3O43524 673 aa18.7■□□□□ 0.58
UBA1-201ENST00000335972 CHD1LQ86WJ1 897 aa18.7■□□□□ 0.58
UBA1-201ENST00000335972 IFT57Q9NWB7 429 aa18.69■□□□□ 0.58
UBA1-201ENST00000335972 SIRT2Q8IXJ6 389 aa18.69■□□□□ 0.58
UBA1-201ENST00000335972 NUCB1Q02818 461 aa18.68■□□□□ 0.58
UBA1-201ENST00000335972 NRXN3Q9Y4C0 1643 aa18.68■□□□□ 0.58
UBA1-201ENST00000335972 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
UBA1-201ENST00000335972 TTC21BQ7Z4L5 1316 aa18.68■□□□□ 0.58
UBA1-201ENST00000335972 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
UBA1-201ENST00000335972 ZNF853P0CG23 659 aa18.67■□□□□ 0.58
UBA1-201ENST00000335972 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
UBA1-201ENST00000335972 AGLP35573 1532 aa18.66■□□□□ 0.58
UBA1-201ENST00000335972 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
UBA1-201ENST00000335972 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
UBA1-201ENST00000335972 SETD1AO15047 1707 aaKnown RBP18.66■□□□□ 0.58
UBA1-201ENST00000335972 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
UBA1-201ENST00000335972 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
UBA1-201ENST00000335972 TMEM2Q9UHN6 1383 aa18.65■□□□□ 0.58
UBA1-201ENST00000335972 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
UBA1-201ENST00000335972 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
UBA1-201ENST00000335972 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
UBA1-201ENST00000335972 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
UBA1-201ENST00000335972 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
UBA1-201ENST00000335972 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
UBA1-201ENST00000335972 AMOTL2Q9Y2J4 779 aa18.62■□□□□ 0.57
UBA1-201ENST00000335972 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
UBA1-201ENST00000335972 NGDNQ8NEJ9 315 aaKnown RBP18.62■□□□□ 0.57
UBA1-201ENST00000335972 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
UBA1-201ENST00000335972 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
UBA1-201ENST00000335972 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
UBA1-201ENST00000335972 SLC4A10Q6U841 1118 aa18.6■□□□□ 0.57
UBA1-201ENST00000335972 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
UBA1-201ENST00000335972 OTUD7AQ8TE49 926 aaPredicted RBP18.6■□□□□ 0.57
UBA1-201ENST00000335972 AATKQ6ZMQ8 1374 aa18.6■□□□□ 0.57
UBA1-201ENST00000335972 CDC42BPGQ6DT37 1551 aa18.6■□□□□ 0.57
UBA1-201ENST00000335972 ADAMTS13Q76LX8 1427 aa18.59■□□□□ 0.57
UBA1-201ENST00000335972 ABCC4O15439 1325 aa18.59■□□□□ 0.57
UBA1-201ENST00000335972 F6X3S4 739 aa18.59■□□□□ 0.57
UBA1-201ENST00000335972 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.57
UBA1-201ENST00000335972 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.56
UBA1-201ENST00000335972 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 API5Q9BZZ5 524 aaKnown RBP18.57■□□□□ 0.56
UBA1-201ENST00000335972 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
UBA1-201ENST00000335972 G2E3Q7L622 706 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 AMPHP49418 695 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 TBC1D9Q6ZT07 1266 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 ARHGAP45Q92619 1136 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
UBA1-201ENST00000335972 MEIS3Q99687 375 aa18.56■□□□□ 0.56
UBA1-201ENST00000335972 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
UBA1-201ENST00000335972 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
UBA1-201ENST00000335972 CD2BP2O95400 341 aaKnown RBP18.56■□□□□ 0.56
UBA1-201ENST00000335972 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
UBA1-201ENST00000335972 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
UBA1-201ENST00000335972 GCC1Q96CN9 775 aa18.55■□□□□ 0.56
UBA1-201ENST00000335972 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
UBA1-201ENST00000335972 NLRP6P59044 892 aa18.54■□□□□ 0.56
UBA1-201ENST00000335972 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
UBA1-201ENST00000335972 CHL1O00533 1208 aa18.53■□□□□ 0.56
UBA1-201ENST00000335972 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
UBA1-201ENST00000335972 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
UBA1-201ENST00000335972 GSPT1P15170 499 aaKnown RBP18.53■□□□□ 0.56
UBA1-201ENST00000335972 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
UBA1-201ENST00000335972 USP6P35125 1406 aa18.52■□□□□ 0.56
UBA1-201ENST00000335972 TECPR2O15040 1411 aa18.52■□□□□ 0.56
UBA1-201ENST00000335972 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
UBA1-201ENST00000335972 SIRT1Q96EB6 747 aa18.52■□□□□ 0.56
UBA1-201ENST00000335972 EYA1Q99502 592 aa18.52■□□□□ 0.56
UBA1-201ENST00000335972 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms