RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 MAP2P11137 1827 aaKnown RBP21.89■■□□□ 1.1
PDCD1-201ENST00000334409 NFKBIBQ15653 356 aa21.89■■□□□ 1.09
PDCD1-201ENST00000334409 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
PDCD1-201ENST00000334409 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
PDCD1-201ENST00000334409 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
PDCD1-201ENST00000334409 EXOC6Q8TAG9 804 aa21.86■■□□□ 1.09
PDCD1-201ENST00000334409 FRAT1Q92837 279 aaPredicted RBP21.86■■□□□ 1.09
PDCD1-201ENST00000334409 USP31Q70CQ4 1352 aa21.85■■□□□ 1.09
PDCD1-201ENST00000334409 CFAP53Q96M91 514 aa21.85■■□□□ 1.09
PDCD1-201ENST00000334409 ZBTB7CA1YPR0 619 aa21.83■■□□□ 1.09
PDCD1-201ENST00000334409 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.09
PDCD1-201ENST00000334409 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
PDCD1-201ENST00000334409 PIP4K2BP78356 416 aa21.82■■□□□ 1.08
PDCD1-201ENST00000334409 CCDC146Q8IYE0 955 aa21.82■■□□□ 1.08
PDCD1-201ENST00000334409 AATKQ6ZMQ8 1374 aa21.82■■□□□ 1.08
PDCD1-201ENST00000334409 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
PDCD1-201ENST00000334409 MAP3K19Q56UN5 1328 aa21.81■■□□□ 1.08
PDCD1-201ENST00000334409 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
PDCD1-201ENST00000334409 CDCA7LQ96GN5 454 aa21.8■■□□□ 1.08
PDCD1-201ENST00000334409 PXDNQ92626 1479 aa21.8■■□□□ 1.08
PDCD1-201ENST00000334409 DAXXQ9UER7 740 aaPredicted RBP21.79■■□□□ 1.08
PDCD1-201ENST00000334409 DIAPH1O60610 1272 aaKnown RBP21.78■■□□□ 1.08
PDCD1-201ENST00000334409 HSP90AB2PQ58FF8 381 aa21.78■■□□□ 1.08
PDCD1-201ENST00000334409 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
PDCD1-201ENST00000334409 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
PDCD1-201ENST00000334409 SPATA31A3Q5VYP0 1347 aa21.77■■□□□ 1.08
PDCD1-201ENST00000334409 SHPRHQ149N8 1683 aa21.77■■□□□ 1.08
PDCD1-201ENST00000334409 GCP02774 474 aa21.77■■□□□ 1.08
PDCD1-201ENST00000334409 AMPHP49418 695 aa21.77■■□□□ 1.08
PDCD1-201ENST00000334409 COL3A1P02461 1466 aaPredicted RBP21.77■■□□□ 1.08
PDCD1-201ENST00000334409 SBNO1A3KN83 1393 aa21.76■■□□□ 1.07
PDCD1-201ENST00000334409 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
PDCD1-201ENST00000334409 SOS2Q07890 1332 aaPredicted RBP21.76■■□□□ 1.07
PDCD1-201ENST00000334409 PNPLA6Q8IY17 1366 aa21.76■■□□□ 1.07
PDCD1-201ENST00000334409 ROBO1Q9Y6N7 1651 aa21.76■■□□□ 1.07
PDCD1-201ENST00000334409 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
PDCD1-201ENST00000334409 TNS3Q68CZ2 1445 aa21.75■■□□□ 1.07
PDCD1-201ENST00000334409 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
PDCD1-201ENST00000334409 TOM1O60784 492 aa21.74■■□□□ 1.07
PDCD1-201ENST00000334409 ZC3H6P61129 1189 aaKnown RBP21.74■■□□□ 1.07
PDCD1-201ENST00000334409 IL13P35225 146 aa21.72■■□□□ 1.07
PDCD1-201ENST00000334409 KCNH5Q8NCM2 988 aa21.72■■□□□ 1.07
PDCD1-201ENST00000334409 LTV1Q96GA3 475 aaPredicted RBP21.72■■□□□ 1.07
PDCD1-201ENST00000334409 USP54Q70EL1 1684 aa21.72■■□□□ 1.07
PDCD1-201ENST00000334409 CDK12Q9NYV4 1490 aaPredicted RBP21.72■■□□□ 1.07
PDCD1-201ENST00000334409 USP19O94966 1318 aa21.71■■□□□ 1.07
PDCD1-201ENST00000334409 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
PDCD1-201ENST00000334409 MED1Q15648 1581 aaPredicted RBP21.71■■□□□ 1.07
PDCD1-201ENST00000334409 HMOX1P09601 288 aa21.71■■□□□ 1.07
PDCD1-201ENST00000334409 CERKQ8TCT0 537 aa21.71■■□□□ 1.07
PDCD1-201ENST00000334409 HOXC9P31274 260 aa21.7■■□□□ 1.06
PDCD1-201ENST00000334409 NFAT5O94916 1531 aa21.7■■□□□ 1.06
PDCD1-201ENST00000334409 NHSL1Q5SYE7 1610 aa21.69■■□□□ 1.06
PDCD1-201ENST00000334409 LTN1O94822 1766 aa21.68■■□□□ 1.06
PDCD1-201ENST00000334409 FLT4P35916 1363 aa21.68■■□□□ 1.06
PDCD1-201ENST00000334409 APAF1O14727 1248 aa21.68■■□□□ 1.06
PDCD1-201ENST00000334409 ARHGEF10O15013 1369 aa21.68■■□□□ 1.06
PDCD1-201ENST00000334409 SLIT3O75094 1523 aa21.67■■□□□ 1.06
PDCD1-201ENST00000334409 ZNF521Q96K83 1311 aa21.67■■□□□ 1.06
PDCD1-201ENST00000334409 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
PDCD1-201ENST00000334409 CRBNQ96SW2 442 aa21.67■■□□□ 1.06
PDCD1-201ENST00000334409 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
PDCD1-201ENST00000334409 PLIN1O60240 522 aa21.65■■□□□ 1.06
PDCD1-201ENST00000334409 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
PDCD1-201ENST00000334409 CHRNA2Q15822 529 aa21.65■■□□□ 1.06
PDCD1-201ENST00000334409 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
PDCD1-201ENST00000334409 HAP1P54257 671 aaPredicted RBP21.65■■□□□ 1.06
PDCD1-201ENST00000334409 AXIN2Q9Y2T1 843 aa21.65■■□□□ 1.06
PDCD1-201ENST00000334409 AEBP1Q8IUX7 1158 aa21.64■■□□□ 1.06
PDCD1-201ENST00000334409 IP6K1Q92551 441 aa21.64■■□□□ 1.06
PDCD1-201ENST00000334409 DUSP27Q5VZP5 1158 aa21.64■■□□□ 1.05
PDCD1-201ENST00000334409 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
PDCD1-201ENST00000334409 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
PDCD1-201ENST00000334409 RRP9O43818 475 aaKnown RBP21.62■■□□□ 1.05
PDCD1-201ENST00000334409 PRKAR2BP31323 418 aa21.62■■□□□ 1.05
PDCD1-201ENST00000334409 SULT6B1Q6IMI4 303 aa21.62■■□□□ 1.05
PDCD1-201ENST00000334409 PHRF1Q9P1Y6 1649 aaKnown RBP21.61■■□□□ 1.05
PDCD1-201ENST00000334409 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
PDCD1-201ENST00000334409 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
PDCD1-201ENST00000334409 GOLGA2Q08379 1002 aa21.61■■□□□ 1.05
PDCD1-201ENST00000334409 USHBP1Q8N6Y0 703 aa21.61■■□□□ 1.05
PDCD1-201ENST00000334409 EYA1Q99502 592 aa21.61■■□□□ 1.05
PDCD1-201ENST00000334409 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
PDCD1-201ENST00000334409 AHDC1Q5TGY3 1603 aaPredicted RBP21.59■■□□□ 1.05
PDCD1-201ENST00000334409 PHLPP1O60346 1717 aa21.59■■□□□ 1.05
PDCD1-201ENST00000334409 PHACTR3Q96KR7 559 aa21.59■■□□□ 1.05
PDCD1-201ENST00000334409 CRYBG1Q9Y4K1 1723 aa21.58■■□□□ 1.05
PDCD1-201ENST00000334409 FCHSD2O94868 740 aa21.58■■□□□ 1.05
PDCD1-201ENST00000334409 KDM2BQ8NHM5 1336 aa21.58■■□□□ 1.04
PDCD1-201ENST00000334409 RGPD5Q99666 1765 aa21.57■■□□□ 1.04
PDCD1-201ENST00000334409 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
PDCD1-201ENST00000334409 KIF24Q5T7B8 1368 aa21.57■■□□□ 1.04
PDCD1-201ENST00000334409 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
PDCD1-201ENST00000334409 ZMYND15Q9H091 742 aa21.57■■□□□ 1.04
PDCD1-201ENST00000334409 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 FAM161AQ3B820 660 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 ANKRD24Q8TF21 1146 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 FRAT2O75474 233 aaPredicted RBP21.56■■□□□ 1.04
PDCD1-201ENST00000334409 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms