RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 SOX12O15370 315 aa10.74□□□□□ -0.69
LIMK2-201ENST00000331728 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
LIMK2-201ENST00000331728 ADGRB2O60241 1585 aa10.74□□□□□ -0.69
LIMK2-201ENST00000331728 HMMRO75330 724 aa10.74□□□□□ -0.69
LIMK2-201ENST00000331728 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
LIMK2-201ENST00000331728 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
LIMK2-201ENST00000331728 ARHGAP45Q92619 1136 aa10.74□□□□□ -0.69
LIMK2-201ENST00000331728 VAMP4O75379 141 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 MLECQ14165 292 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 SLC4A10Q6U841 1118 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 IFT172Q9UG01 1749 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 MBIPQ9NS73 344 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 ZBTB7BO15156 539 aaPredicted RBP10.73□□□□□ -0.69
LIMK2-201ENST00000331728 REC8O95072 547 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
LIMK2-201ENST00000331728 ZSCAN30Q86W11 494 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
LIMK2-201ENST00000331728 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
LIMK2-201ENST00000331728 CAVIN1Q6NZI2 390 aaKnown RBP10.72□□□□□ -0.69
LIMK2-201ENST00000331728 KIAA1211Q6ZU35 1233 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 POLKQ9UBT6 870 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 PTMAP06454 111 aaKnown RBP10.72□□□□□ -0.69
LIMK2-201ENST00000331728 MCCP23508 829 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 PHACTR3Q96KR7 559 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 GLI2P10070 1586 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 PPP1R9BQ96SB3 815 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 POGZQ7Z3K3 1410 aa10.72□□□□□ -0.69
LIMK2-201ENST00000331728 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.69
LIMK2-201ENST00000331728 DCTN1Q14203 1278 aa10.71□□□□□ -0.69
LIMK2-201ENST00000331728 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
LIMK2-201ENST00000331728 ZC3H13Q5T200 1668 aaKnown RBP10.71□□□□□ -0.69
LIMK2-201ENST00000331728 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
LIMK2-201ENST00000331728 KLHL40Q2TBA0 621 aa10.71□□□□□ -0.69
LIMK2-201ENST00000331728 NME9Q86XW9 330 aa10.71□□□□□ -0.69
LIMK2-201ENST00000331728 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
LIMK2-201ENST00000331728 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.7
LIMK2-201ENST00000331728 CFAP74Q9C0B2 1584 aa10.71□□□□□ -0.7
LIMK2-201ENST00000331728 ADGRB1O14514 1584 aa10.7□□□□□ -0.7
LIMK2-201ENST00000331728 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
LIMK2-201ENST00000331728 BAG4O95429 457 aaKnown RBP10.7□□□□□ -0.7
LIMK2-201ENST00000331728 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
LIMK2-201ENST00000331728 KIF2CQ99661 725 aa10.7□□□□□ -0.7
LIMK2-201ENST00000331728 PDCL3Q9H2J4 239 aa10.7□□□□□ -0.7
LIMK2-201ENST00000331728 MROH1Q8NDA8 1641 aa10.7□□□□□ -0.7
LIMK2-201ENST00000331728 YTHDC2Q9H6S0 1430 aaKnown RBP10.7□□□□□ -0.7
LIMK2-201ENST00000331728 C8orf58Q8NAV2 365 aa10.7□□□□□ -0.7
LIMK2-201ENST00000331728 IBTKQ9P2D0 1353 aaPredicted RBP10.69□□□□□ -0.7
LIMK2-201ENST00000331728 FAM83GA6ND36 823 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 FBXO31Q5XUX0 539 aaPredicted RBP10.69□□□□□ -0.7
LIMK2-201ENST00000331728 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 ABCC3O15438 1527 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 OFD1O75665 1012 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
LIMK2-201ENST00000331728 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
LIMK2-201ENST00000331728 SULT6B1Q6IMI4 303 aa10.68□□□□□ -0.7
LIMK2-201ENST00000331728 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
LIMK2-201ENST00000331728 STK31Q9BXU1 1019 aa10.68□□□□□ -0.7
LIMK2-201ENST00000331728 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
LIMK2-201ENST00000331728 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
LIMK2-201ENST00000331728 CWC22Q9HCG8 908 aaKnown RBP10.68□□□□□ -0.7
LIMK2-201ENST00000331728 CLEC17AQ6ZS10 378 aa10.67□□□□□ -0.7
LIMK2-201ENST00000331728 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
LIMK2-201ENST00000331728 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.67□□□□□ -0.7
LIMK2-201ENST00000331728 MLH3Q9UHC1 1453 aa10.67□□□□□ -0.7
LIMK2-201ENST00000331728 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
LIMK2-201ENST00000331728 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
LIMK2-201ENST00000331728 ERC2O15083 957 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 TXNDC2Q86VQ3 553 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 C16orf71Q8IYS4 520 aaPredicted RBP10.66□□□□□ -0.7
LIMK2-201ENST00000331728 ABCC4O15439 1325 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
LIMK2-201ENST00000331728 RILPL2Q969X0 211 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 NEK4P51957 841 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 ZNF445P59923 1031 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
LIMK2-201ENST00000331728 DCTPP1Q9H773 170 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
LIMK2-201ENST00000331728 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 PPLO60437 1756 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 FOXD4L6Q3SYB3 417 aaPredicted RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 HS1BP3Q53T59 392 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 DNTTIP2Q5QJE6 756 aaKnown RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 FOXD4L3Q6VB84 417 aaPredicted RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 HECW2Q9P2P5 1572 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 MED14O60244 1454 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
LIMK2-201ENST00000331728 SDSP20132 328 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 TERF1P54274 439 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms