RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TECPR2O15040 1411 aa22.63■■□□□ 1.21
CLSTN3-202ENST00000331148 MORC1Q86VD1 984 aa22.62■■□□□ 1.21
CLSTN3-202ENST00000331148 CEP170BQ9Y4F5 1589 aaPredicted RBP22.62■■□□□ 1.21
CLSTN3-202ENST00000331148 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
CLSTN3-202ENST00000331148 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
CLSTN3-202ENST00000331148 PPP1R9BQ96SB3 815 aa22.61■■□□□ 1.21
CLSTN3-202ENST00000331148 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
CLSTN3-202ENST00000331148 MED14O60244 1454 aa22.61■■□□□ 1.21
CLSTN3-202ENST00000331148 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
CLSTN3-202ENST00000331148 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
CLSTN3-202ENST00000331148 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
CLSTN3-202ENST00000331148 ZSCAN30Q86W11 494 aa22.59■■□□□ 1.21
CLSTN3-202ENST00000331148 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
CLSTN3-202ENST00000331148 CPS1P31327 1500 aa22.58■■□□□ 1.21
CLSTN3-202ENST00000331148 DDX19BQ9UMR2 479 aa22.58■■□□□ 1.21
CLSTN3-202ENST00000331148 TRIM27P14373 513 aa22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 NASPP49321 788 aaPredicted RBP22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 ZNF142P52746 1687 aaPredicted RBP22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 SETD1BQ9UPS6 1966 aaKnown RBP22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 CT47B1P0C2W7 299 aaPredicted RBP22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 ITPRIPQ8IWB1 547 aa22.57■■□□□ 1.2
CLSTN3-202ENST00000331148 OFD1O75665 1012 aa22.56■■□□□ 1.2
CLSTN3-202ENST00000331148 NCBP3Q53F19 620 aaKnown RBP22.56■■□□□ 1.2
CLSTN3-202ENST00000331148 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
CLSTN3-202ENST00000331148 DIP2AQ14689 1571 aa22.56■■□□□ 1.2
CLSTN3-202ENST00000331148 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
CLSTN3-202ENST00000331148 WASLO00401 505 aaPredicted RBP22.54■■□□□ 1.2
CLSTN3-202ENST00000331148 KIF2CQ99661 725 aa22.54■■□□□ 1.2
CLSTN3-202ENST00000331148 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
CLSTN3-202ENST00000331148 IBTKQ9P2D0 1353 aaPredicted RBP22.54■■□□□ 1.2
CLSTN3-202ENST00000331148 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.54■■□□□ 1.2
CLSTN3-202ENST00000331148 ADGRB2O60241 1585 aa22.53■■□□□ 1.2
CLSTN3-202ENST00000331148 NUCB1Q02818 461 aa22.53■■□□□ 1.2
CLSTN3-202ENST00000331148 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
CLSTN3-202ENST00000331148 A0A1W2PP64 1363 aa22.53■■□□□ 1.2
CLSTN3-202ENST00000331148 MTHFSP49914 203 aa22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 CFAP53Q96M91 514 aa22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 CD2BP2O95400 341 aaKnown RBP22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 ANP32BQ92688 251 aaKnown RBP22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 FOXD4L1Q9NU39 408 aa22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 CABP1Q9NZU7 370 aa22.52■■□□□ 1.2
CLSTN3-202ENST00000331148 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 K7ELQ4 463 aaPredicted RBP22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 MSNP26038 577 aaKnown RBP22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 SSFA2P28290 1259 aa22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 TERF1P54274 439 aa22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 ANKLE2Q86XL3 938 aa22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 AMOTL2Q9Y2J4 779 aa22.51■■□□□ 1.19
CLSTN3-202ENST00000331148 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 HDGFL2Q7Z4V5 671 aaPredicted RBP22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 SSH1Q8WYL5 1049 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 GOLGA6L22H0YM25 854 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 RIPK4P57078 832 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 CALD1Q05682 793 aaKnown RBP22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 KLHL40Q2TBA0 621 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 ZBTB40Q9NUA8 1239 aa22.5■■□□□ 1.19
CLSTN3-202ENST00000331148 NSD2O96028 1365 aa22.49■■□□□ 1.19
CLSTN3-202ENST00000331148 CLEC17AQ6ZS10 378 aa22.49■■□□□ 1.19
CLSTN3-202ENST00000331148 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
CLSTN3-202ENST00000331148 CD163L1Q9NR16 1453 aa22.49■■□□□ 1.19
CLSTN3-202ENST00000331148 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
CLSTN3-202ENST00000331148 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
CLSTN3-202ENST00000331148 NOB1Q9ULX3 412 aaKnown RBP22.47■■□□□ 1.19
CLSTN3-202ENST00000331148 CHD1LQ86WJ1 897 aa22.47■■□□□ 1.19
CLSTN3-202ENST00000331148 DDX49Q9Y6V7 483 aaKnown RBP22.47■■□□□ 1.19
CLSTN3-202ENST00000331148 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
CLSTN3-202ENST00000331148 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLSTN3-202ENST00000331148 GAS2L2Q8NHY3 880 aa22.46■■□□□ 1.19
CLSTN3-202ENST00000331148 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
CLSTN3-202ENST00000331148 BAG4O95429 457 aaKnown RBP22.45■■□□□ 1.18
CLSTN3-202ENST00000331148 RBM10P98175 930 aaKnown RBP22.45■■□□□ 1.18
CLSTN3-202ENST00000331148 ATP7BP35670 1465 aa22.44■■□□□ 1.18
CLSTN3-202ENST00000331148 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.44■■□□□ 1.18
CLSTN3-202ENST00000331148 PIK3R4Q99570 1358 aa22.43■■□□□ 1.18
CLSTN3-202ENST00000331148 ZNF445P59923 1031 aa22.43■■□□□ 1.18
CLSTN3-202ENST00000331148 HS1BP3Q53T59 392 aa22.43■■□□□ 1.18
CLSTN3-202ENST00000331148 CCDC61Q9Y6R9 512 aa22.43■■□□□ 1.18
CLSTN3-202ENST00000331148 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
CLSTN3-202ENST00000331148 PPIP5K1Q6PFW1 1433 aa22.42■■□□□ 1.18
CLSTN3-202ENST00000331148 RBM42Q9BTD8 480 aaKnown RBP22.42■■□□□ 1.18
CLSTN3-202ENST00000331148 MAP7D2Q96T17 732 aa22.42■■□□□ 1.18
CLSTN3-202ENST00000331148 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
CLSTN3-202ENST00000331148 FYB1O15117 783 aa22.41■■□□□ 1.18
CLSTN3-202ENST00000331148 R3HCC1Q9Y3T6 440 aaKnown RBP22.41■■□□□ 1.18
CLSTN3-202ENST00000331148 TBC1D9Q6ZT07 1266 aa22.4■■□□□ 1.18
CLSTN3-202ENST00000331148 NOL7Q9UMY1 257 aaKnown RBP22.4■■□□□ 1.18
CLSTN3-202ENST00000331148 ZNF500O60304 480 aaPredicted RBP22.39■■□□□ 1.17
CLSTN3-202ENST00000331148 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
CLSTN3-202ENST00000331148 XRN1Q8IZH2 1706 aaKnown RBP22.39■■□□□ 1.17
CLSTN3-202ENST00000331148 PRDM4Q9UKN5 801 aa22.38■■□□□ 1.17
CLSTN3-202ENST00000331148 TRIM35Q9UPQ4 493 aa22.38■■□□□ 1.17
CLSTN3-202ENST00000331148 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
CLSTN3-202ENST00000331148 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
CLSTN3-202ENST00000331148 FAM13BQ9NYF5 915 aa22.38■■□□□ 1.17
CLSTN3-202ENST00000331148 KCNA6P17658 529 aa22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 ZSCAN23Q3MJ62 389 aa22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 PDLIM2Q96JY6 352 aa22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 PRR36Q9H6K5 1346 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms