RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.01
PRKCD-201ENST00000330452 ZFYVE9O95405 1425 aa21.39■■□□□ 1.01
PRKCD-201ENST00000330452 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.01
PRKCD-201ENST00000330452 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
PRKCD-201ENST00000330452 GTPBP4Q9BZE4 634 aaKnown RBP21.39■■□□□ 1.01
PRKCD-201ENST00000330452 ANTXR1Q9H6X2 564 aa21.39■■□□□ 1.01
PRKCD-201ENST00000330452 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
PRKCD-201ENST00000330452 CCDC94Q9BW85 323 aaPredicted RBP21.38■■□□□ 1.01
PRKCD-201ENST00000330452 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
PRKCD-201ENST00000330452 TMPOP42166 694 aaKnown RBP21.37■■□□□ 1.01
PRKCD-201ENST00000330452 PTPRMP28827 1452 aa21.37■■□□□ 1.01
PRKCD-201ENST00000330452 LETM1O95202 739 aaPredicted RBP21.36■■□□□ 1.01
PRKCD-201ENST00000330452 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
PRKCD-201ENST00000330452 R3HCC1Q9Y3T6 440 aaKnown RBP21.36■■□□□ 1.01
PRKCD-201ENST00000330452 TERF2IPQ9NYB0 399 aa21.36■■□□□ 1.01
PRKCD-201ENST00000330452 TRIM35Q9UPQ4 493 aa21.36■■□□□ 1.01
PRKCD-201ENST00000330452 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
PRKCD-201ENST00000330452 AGLP35573 1532 aa21.35■■□□□ 1.01
PRKCD-201ENST00000330452 ADGRB2O60241 1585 aa21.35■■□□□ 1.01
PRKCD-201ENST00000330452 LTKP29376 864 aa21.35■■□□□ 1.01
PRKCD-201ENST00000330452 UQCRHLA0A096LP55 91 aa21.34■■□□□ 1.01
PRKCD-201ENST00000330452 UQCRHP07919 91 aa21.34■■□□□ 1.01
PRKCD-201ENST00000330452 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
PRKCD-201ENST00000330452 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
PRKCD-201ENST00000330452 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
PRKCD-201ENST00000330452 MCM4P33991 863 aa21.33■■□□□ 1.01
PRKCD-201ENST00000330452 CD163L1Q9NR16 1453 aa21.33■■□□□ 1.01
PRKCD-201ENST00000330452 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
PRKCD-201ENST00000330452 ZRANB1Q9UGI0 708 aa21.33■■□□□ 1.01
PRKCD-201ENST00000330452 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1.01
PRKCD-201ENST00000330452 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1
PRKCD-201ENST00000330452 ZSCAN30Q86W11 494 aa21.32■■□□□ 1
PRKCD-201ENST00000330452 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
PRKCD-201ENST00000330452 TNRQ92752 1358 aa21.32■■□□□ 1
PRKCD-201ENST00000330452 ZBTB22O15209 634 aa21.32■■□□□ 1
PRKCD-201ENST00000330452 RWDD1Q9H446 243 aaPredicted RBP21.32■■□□□ 1
PRKCD-201ENST00000330452 TRAK2O60296 914 aa21.31■■□□□ 1
PRKCD-201ENST00000330452 DYNC1I1O14576 645 aa21.31■■□□□ 1
PRKCD-201ENST00000330452 BECN1Q14457 450 aa21.31■■□□□ 1
PRKCD-201ENST00000330452 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
PRKCD-201ENST00000330452 NLRP1Q9C000 1473 aa21.3■■□□□ 1
PRKCD-201ENST00000330452 HDGFL2Q7Z4V5 671 aaPredicted RBP21.3■■□□□ 1
PRKCD-201ENST00000330452 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
PRKCD-201ENST00000330452 DIAPH1O60610 1272 aaKnown RBP21.29■■□□□ 1
PRKCD-201ENST00000330452 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
PRKCD-201ENST00000330452 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
PRKCD-201ENST00000330452 TRIM27P14373 513 aa21.29■■□□□ 1
PRKCD-201ENST00000330452 CDK11BP21127 795 aaKnown RBP21.29■■□□□ 1
PRKCD-201ENST00000330452 TAF3Q5VWG9 929 aa21.28■■□□□ 1
PRKCD-201ENST00000330452 RGS22Q8NE09 1264 aa21.27■■□□□ 1
PRKCD-201ENST00000330452 RBM33Q96EV2 1170 aaKnown RBP21.27■■□□□ 1
PRKCD-201ENST00000330452 REREQ9P2R6 1566 aa21.26■□□□□ 0.99
PRKCD-201ENST00000330452 CT47B1P0C2W7 299 aaPredicted RBP21.26■□□□□ 0.99
PRKCD-201ENST00000330452 DNTTIP2Q5QJE6 756 aaKnown RBP21.26■□□□□ 0.99
PRKCD-201ENST00000330452 ITPRIPQ8IWB1 547 aa21.25■□□□□ 0.99
PRKCD-201ENST00000330452 NOB1Q9ULX3 412 aaKnown RBP21.25■□□□□ 0.99
PRKCD-201ENST00000330452 SOX12O15370 315 aa21.24■□□□□ 0.99
PRKCD-201ENST00000330452 MSNP26038 577 aaKnown RBP21.24■□□□□ 0.99
PRKCD-201ENST00000330452 IRX3P78415 501 aaPredicted RBP21.23■□□□□ 0.99
PRKCD-201ENST00000330452 ATF7IPQ6VMQ6 1270 aa21.23■□□□□ 0.99
PRKCD-201ENST00000330452 MED14O60244 1454 aa21.23■□□□□ 0.99
PRKCD-201ENST00000330452 NME9Q86XW9 330 aa21.22■□□□□ 0.99
PRKCD-201ENST00000330452 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
PRKCD-201ENST00000330452 IL16Q14005 1332 aa21.21■□□□□ 0.99
PRKCD-201ENST00000330452 TMEM57Q8N5G2 664 aa21.21■□□□□ 0.99
PRKCD-201ENST00000330452 RNF216Q9NWF9 866 aaPredicted RBP21.21■□□□□ 0.99
PRKCD-201ENST00000330452 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
PRKCD-201ENST00000330452 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.99
PRKCD-201ENST00000330452 PRKAR2BP31323 418 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 GAS2L3Q86XJ1 694 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 CCDC173Q0VFZ6 552 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
PRKCD-201ENST00000330452 PPP1R9BQ96SB3 815 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 CGNQ9P2M7 1197 aaKnown RBP21.2■□□□□ 0.98
PRKCD-201ENST00000330452 DDX19BQ9UMR2 479 aa21.2■□□□□ 0.98
PRKCD-201ENST00000330452 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
PRKCD-201ENST00000330452 ROBO2Q9HCK4 1378 aa21.19■□□□□ 0.98
PRKCD-201ENST00000330452 TBC1D32Q96NH3 1257 aa21.19■□□□□ 0.98
PRKCD-201ENST00000330452 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
PRKCD-201ENST00000330452 FCHSD2O94868 740 aa21.18■□□□□ 0.98
PRKCD-201ENST00000330452 HMOX1P09601 288 aa21.18■□□□□ 0.98
PRKCD-201ENST00000330452 CBX1P83916 185 aa21.18■□□□□ 0.98
PRKCD-201ENST00000330452 NUDT16Q96DE0 195 aaKnown RBP21.18■□□□□ 0.98
PRKCD-201ENST00000330452 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
PRKCD-201ENST00000330452 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRKCD-201ENST00000330452 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
PRKCD-201ENST00000330452 PHACTR3Q96KR7 559 aa21.17■□□□□ 0.98
PRKCD-201ENST00000330452 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
PRKCD-201ENST00000330452 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
PRKCD-201ENST00000330452 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
PRKCD-201ENST00000330452 EMILIN1Q9Y6C2 1016 aa21.16■□□□□ 0.98
PRKCD-201ENST00000330452 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
PRKCD-201ENST00000330452 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
PRKCD-201ENST00000330452 ZBTB40Q9NUA8 1239 aa21.14■□□□□ 0.98
PRKCD-201ENST00000330452 PPIP5K1Q6PFW1 1433 aa21.14■□□□□ 0.97
PRKCD-201ENST00000330452 IRX5P78411 483 aaPredicted RBP21.13■□□□□ 0.97
PRKCD-201ENST00000330452 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
PRKCD-201ENST00000330452 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
PRKCD-201ENST00000330452 ZNF500O60304 480 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms