RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
ATP2C1-201ENST00000328560 METP08581 1390 aa17.61■□□□□ 0.41
ATP2C1-201ENST00000328560 MED14O60244 1454 aa17.61■□□□□ 0.41
ATP2C1-201ENST00000328560 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
ATP2C1-201ENST00000328560 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 FAM135BQ49AJ0 1406 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 APBB1O00213 710 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
ATP2C1-201ENST00000328560 SULT6B1Q6IMI4 303 aa17.59■□□□□ 0.41
ATP2C1-201ENST00000328560 HSP90AA1P07900 732 aaKnown RBP17.59■□□□□ 0.41
ATP2C1-201ENST00000328560 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.41
ATP2C1-201ENST00000328560 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.4
ATP2C1-201ENST00000328560 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
ATP2C1-201ENST00000328560 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
ATP2C1-201ENST00000328560 MCM4P33991 863 aa17.56■□□□□ 0.4
ATP2C1-201ENST00000328560 MCM10Q7L590 875 aa17.56■□□□□ 0.4
ATP2C1-201ENST00000328560 SIRT2Q8IXJ6 389 aa17.56■□□□□ 0.4
ATP2C1-201ENST00000328560 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
ATP2C1-201ENST00000328560 DIP2BQ9P265 1576 aa17.54■□□□□ 0.4
ATP2C1-201ENST00000328560 TNRQ92752 1358 aa17.54■□□□□ 0.4
ATP2C1-201ENST00000328560 ATP7BP35670 1465 aa17.54■□□□□ 0.4
ATP2C1-201ENST00000328560 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
ATP2C1-201ENST00000328560 ARHGAP45Q92619 1136 aa17.53■□□□□ 0.4
ATP2C1-201ENST00000328560 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
ATP2C1-201ENST00000328560 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
ATP2C1-201ENST00000328560 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 AGLP35573 1532 aa17.52■□□□□ 0.4
ATP2C1-201ENST00000328560 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.39
ATP2C1-201ENST00000328560 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
ATP2C1-201ENST00000328560 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 MAP2P11137 1827 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 TRAK2O60296 914 aa17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 CEBPAP49715 358 aaPredicted RBP17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 ABCC4O15439 1325 aa17.5■□□□□ 0.39
ATP2C1-201ENST00000328560 ANKRD26Q9UPS8 1709 aa17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 CPS1P31327 1500 aa17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 ACEP12821 1306 aa17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
ATP2C1-201ENST00000328560 GOLGA6L3A6NEY3 463 aa17.48■□□□□ 0.39
ATP2C1-201ENST00000328560 L1TD1Q5T7N2 865 aaKnown RBP17.48■□□□□ 0.39
ATP2C1-201ENST00000328560 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
ATP2C1-201ENST00000328560 CD2BP2O95400 341 aaKnown RBP17.47■□□□□ 0.39
ATP2C1-201ENST00000328560 SMARCA5O60264 1052 aaPredicted RBP17.47■□□□□ 0.39
ATP2C1-201ENST00000328560 NGDNQ8NEJ9 315 aaKnown RBP17.47■□□□□ 0.39
ATP2C1-201ENST00000328560 FOXO3O43524 673 aa17.46■□□□□ 0.39
ATP2C1-201ENST00000328560 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
ATP2C1-201ENST00000328560 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
ATP2C1-201ENST00000328560 PTCH1Q13635 1447 aa17.46■□□□□ 0.39
ATP2C1-201ENST00000328560 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
ATP2C1-201ENST00000328560 CDC45O75419 566 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
ATP2C1-201ENST00000328560 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 PLEKHM2Q8IWE5 1019 aa17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 MEIS3Q99687 375 aa17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
ATP2C1-201ENST00000328560 F6X3S4 739 aa17.43■□□□□ 0.38
ATP2C1-201ENST00000328560 PANK2Q9BZ23 570 aa17.43■□□□□ 0.38
ATP2C1-201ENST00000328560 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
ATP2C1-201ENST00000328560 KIF2CQ99661 725 aa17.43■□□□□ 0.38
ATP2C1-201ENST00000328560 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
ATP2C1-201ENST00000328560 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 SNX21Q969T3 373 aa17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 LTKP29376 864 aa17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 DCTPP1Q9H773 170 aa17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
ATP2C1-201ENST00000328560 CHL1O00533 1208 aa17.41■□□□□ 0.38
ATP2C1-201ENST00000328560 AMPHP49418 695 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms