RNA–Protein interactions for RNA: ENST00000322914.7

TMC6-202, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,786 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-202ENST00000322914 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
TMC6-202ENST00000322914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
TMC6-202ENST00000322914 FTSJ3Q8IY81 847 aaKnown RBP22.57■■□□□ 1.2
TMC6-202ENST00000322914 AMOTL2Q9Y2J4 779 aa22.56■■□□□ 1.2
TMC6-202ENST00000322914 FSD2A1L4K1 749 aa22.54■■□□□ 1.2
TMC6-202ENST00000322914 CHMP5Q9NZZ3 219 aa22.54■■□□□ 1.2
TMC6-202ENST00000322914 MVPQ14764 893 aaKnown RBP22.52■■□□□ 1.2
TMC6-202ENST00000322914 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
TMC6-202ENST00000322914 PNPLA6Q8IY17 1366 aa22.51■■□□□ 1.19
TMC6-202ENST00000322914 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
TMC6-202ENST00000322914 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
TMC6-202ENST00000322914 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
TMC6-202ENST00000322914 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
TMC6-202ENST00000322914 NME9Q86XW9 330 aa22.49■■□□□ 1.19
TMC6-202ENST00000322914 DZIP1LQ8IYY4 767 aaKnown RBP22.49■■□□□ 1.19
TMC6-202ENST00000322914 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
TMC6-202ENST00000322914 HSCBQ8IWL3 235 aa22.49■■□□□ 1.19
TMC6-202ENST00000322914 ITPRIPQ8IWB1 547 aa22.48■■□□□ 1.19
TMC6-202ENST00000322914 WDR63Q8IWG1 891 aa22.48■■□□□ 1.19
TMC6-202ENST00000322914 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
TMC6-202ENST00000322914 AAMPQ13685 434 aa22.48■■□□□ 1.19
TMC6-202ENST00000322914 CLCN1P35523 988 aa22.47■■□□□ 1.19
TMC6-202ENST00000322914 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
TMC6-202ENST00000322914 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
TMC6-202ENST00000322914 FBLN1P23142 703 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 ZRANB1Q9UGI0 708 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 MRE11P49959 708 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
TMC6-202ENST00000322914 POLKQ9UBT6 870 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 PIK3R4Q99570 1358 aa22.46■■□□□ 1.19
TMC6-202ENST00000322914 GRPEL1Q9HAV7 217 aa22.45■■□□□ 1.19
TMC6-202ENST00000322914 NUTM2FA1L443 756 aa22.45■■□□□ 1.18
TMC6-202ENST00000322914 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
TMC6-202ENST00000322914 RGPD8O14715 1765 aaPredicted RBP22.44■■□□□ 1.18
TMC6-202ENST00000322914 FOXD4L1Q9NU39 408 aa22.44■■□□□ 1.18
TMC6-202ENST00000322914 CHD2O14647 1828 aaKnown RBP22.43■■□□□ 1.18
TMC6-202ENST00000322914 ACEP12821 1306 aa22.43■■□□□ 1.18
TMC6-202ENST00000322914 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
TMC6-202ENST00000322914 KCNA6P17658 529 aa22.43■■□□□ 1.18
TMC6-202ENST00000322914 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
TMC6-202ENST00000322914 DIAPH1O60610 1272 aaKnown RBP22.42■■□□□ 1.18
TMC6-202ENST00000322914 TRIM27P14373 513 aa22.42■■□□□ 1.18
TMC6-202ENST00000322914 AATKQ6ZMQ8 1374 aa22.42■■□□□ 1.18
TMC6-202ENST00000322914 HSP90AA1P07900 732 aaKnown RBP22.42■■□□□ 1.18
TMC6-202ENST00000322914 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
TMC6-202ENST00000322914 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
TMC6-202ENST00000322914 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
TMC6-202ENST00000322914 USP6P35125 1406 aa22.41■■□□□ 1.18
TMC6-202ENST00000322914 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
TMC6-202ENST00000322914 DDX11L8A8MPP1 907 aa22.4■■□□□ 1.18
TMC6-202ENST00000322914 COG3Q96JB2 828 aa22.4■■□□□ 1.18
TMC6-202ENST00000322914 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
TMC6-202ENST00000322914 HSP90AA2PQ14568 343 aaPredicted RBP22.39■■□□□ 1.18
TMC6-202ENST00000322914 ERBB4Q15303 1308 aa22.39■■□□□ 1.18
TMC6-202ENST00000322914 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.17
TMC6-202ENST00000322914 TTC21BQ7Z4L5 1316 aa22.39■■□□□ 1.17
TMC6-202ENST00000322914 LNPKQ9C0E8 428 aa22.38■■□□□ 1.17
TMC6-202ENST00000322914 ESPNB1AK53 854 aa22.38■■□□□ 1.17
TMC6-202ENST00000322914 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
TMC6-202ENST00000322914 TRIM44Q96DX7 344 aaPredicted RBP22.38■■□□□ 1.17
TMC6-202ENST00000322914 FMN2Q9NZ56 1722 aa22.38■■□□□ 1.17
TMC6-202ENST00000322914 SSH2Q76I76 1423 aa22.38■■□□□ 1.17
TMC6-202ENST00000322914 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
TMC6-202ENST00000322914 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
TMC6-202ENST00000322914 HSP90AB1P08238 724 aaKnown RBP22.37■■□□□ 1.17
TMC6-202ENST00000322914 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
TMC6-202ENST00000322914 TNPO1Q92973 898 aaKnown RBP22.37■■□□□ 1.17
TMC6-202ENST00000322914 GAS2L3Q86XJ1 694 aa22.37■■□□□ 1.17
TMC6-202ENST00000322914 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
TMC6-202ENST00000322914 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
TMC6-202ENST00000322914 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
TMC6-202ENST00000322914 GLIPR1L2Q4G1C9 344 aa22.36■■□□□ 1.17
TMC6-202ENST00000322914 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
TMC6-202ENST00000322914 DDX19BQ9UMR2 479 aa22.35■■□□□ 1.17
TMC6-202ENST00000322914 ANKARQ7Z5J8 1434 aa22.34■■□□□ 1.17
TMC6-202ENST00000322914 HDAC1Q13547 482 aaPredicted RBP22.33■■□□□ 1.17
TMC6-202ENST00000322914 ATF7IPQ6VMQ6 1270 aa22.33■■□□□ 1.17
TMC6-202ENST00000322914 TMPOP42166 694 aaKnown RBP22.33■■□□□ 1.17
TMC6-202ENST00000322914 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.16
TMC6-202ENST00000322914 IL13P35225 146 aa22.31■■□□□ 1.16
TMC6-202ENST00000322914 FCHSD2O94868 740 aa22.31■■□□□ 1.16
TMC6-202ENST00000322914 NPHP4O75161 1426 aaPredicted RBP22.31■■□□□ 1.16
TMC6-202ENST00000322914 SMC5Q8IY18 1101 aa22.3■■□□□ 1.16
TMC6-202ENST00000322914 TRIM35Q9UPQ4 493 aa22.3■■□□□ 1.16
TMC6-202ENST00000322914 CD2BP2O95400 341 aaKnown RBP22.29■■□□□ 1.16
TMC6-202ENST00000322914 GBP4Q96PP9 640 aa22.29■■□□□ 1.16
TMC6-202ENST00000322914 USP31Q70CQ4 1352 aa22.28■■□□□ 1.16
TMC6-202ENST00000322914 PIK3C2AO00443 1686 aa22.28■■□□□ 1.16
TMC6-202ENST00000322914 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
TMC6-202ENST00000322914 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
TMC6-202ENST00000322914 TTC21AQ8NDW8 1320 aa22.27■■□□□ 1.16
TMC6-202ENST00000322914 DDIT3P35638 169 aa22.27■■□□□ 1.16
TMC6-202ENST00000322914 RBM25P49756 843 aaKnown RBP22.27■■□□□ 1.16
TMC6-202ENST00000322914 PKNOX2Q96KN3 472 aa22.27■■□□□ 1.16
TMC6-202ENST00000322914 PRKAR2BP31323 418 aa22.27■■□□□ 1.15
TMC6-202ENST00000322914 NGDNQ8NEJ9 315 aaKnown RBP22.27■■□□□ 1.15
TMC6-202ENST00000322914 ZBTB40Q9NUA8 1239 aa22.27■■□□□ 1.15
TMC6-202ENST00000322914 ANKRD45Q5TZF3 282 aa22.25■■□□□ 1.15
TMC6-202ENST00000322914 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms