RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CHD1LQ86WJ1 897 aa21.92■■□□□ 1.1
COL9A1-201ENST00000320755 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL9A1-201ENST00000320755 NUCB1Q02818 461 aa21.91■■□□□ 1.1
COL9A1-201ENST00000320755 AEBP1Q8IUX7 1158 aa21.91■■□□□ 1.1
COL9A1-201ENST00000320755 ATP7BP35670 1465 aa21.91■■□□□ 1.1
COL9A1-201ENST00000320755 ZBTB7BO15156 539 aaPredicted RBP21.91■■□□□ 1.1
COL9A1-201ENST00000320755 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
COL9A1-201ENST00000320755 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
COL9A1-201ENST00000320755 ANTXR1Q9H6X2 564 aa21.9■■□□□ 1.1
COL9A1-201ENST00000320755 ZMYM3Q14202 1370 aa21.9■■□□□ 1.1
COL9A1-201ENST00000320755 ARXQ96QS3 562 aa21.89■■□□□ 1.1
COL9A1-201ENST00000320755 SULT6B1Q6IMI4 303 aa21.89■■□□□ 1.09
COL9A1-201ENST00000320755 KRT24Q2M2I5 525 aa21.88■■□□□ 1.09
COL9A1-201ENST00000320755 CPSF1Q10570 1443 aaKnown RBP21.88■■□□□ 1.09
COL9A1-201ENST00000320755 PRR36Q9H6K5 1346 aa21.88■■□□□ 1.09
COL9A1-201ENST00000320755 CFAP44Q96MT7 982 aa21.87■■□□□ 1.09
COL9A1-201ENST00000320755 CPS1P31327 1500 aa21.86■■□□□ 1.09
COL9A1-201ENST00000320755 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
COL9A1-201ENST00000320755 ZNF428Q96B54 188 aa21.86■■□□□ 1.09
COL9A1-201ENST00000320755 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
COL9A1-201ENST00000320755 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
COL9A1-201ENST00000320755 MCM10Q7L590 875 aa21.85■■□□□ 1.09
COL9A1-201ENST00000320755 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
COL9A1-201ENST00000320755 DLC1Q96QB1 1528 aa21.85■■□□□ 1.09
COL9A1-201ENST00000320755 LMOD3Q0VAK6 560 aa21.84■■□□□ 1.09
COL9A1-201ENST00000320755 SIRT2Q8IXJ6 389 aa21.84■■□□□ 1.09
COL9A1-201ENST00000320755 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
COL9A1-201ENST00000320755 SPATA31D1Q6ZQQ2 1576 aa21.83■■□□□ 1.08
COL9A1-201ENST00000320755 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
COL9A1-201ENST00000320755 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
COL9A1-201ENST00000320755 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
COL9A1-201ENST00000320755 HSCBQ8IWL3 235 aa21.82■■□□□ 1.08
COL9A1-201ENST00000320755 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
COL9A1-201ENST00000320755 ACEP12821 1306 aa21.81■■□□□ 1.08
COL9A1-201ENST00000320755 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
COL9A1-201ENST00000320755 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
COL9A1-201ENST00000320755 MIS18AQ9NYP9 233 aa21.81■■□□□ 1.08
COL9A1-201ENST00000320755 AGLP35573 1532 aa21.81■■□□□ 1.08
COL9A1-201ENST00000320755 ROBO2Q9HCK4 1378 aa21.81■■□□□ 1.08
COL9A1-201ENST00000320755 APBB1O00213 710 aa21.81■■□□□ 1.08
COL9A1-201ENST00000320755 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
COL9A1-201ENST00000320755 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
COL9A1-201ENST00000320755 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
COL9A1-201ENST00000320755 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
COL9A1-201ENST00000320755 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
COL9A1-201ENST00000320755 CHMP4BQ9H444 224 aaKnown RBP21.8■■□□□ 1.08
COL9A1-201ENST00000320755 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
COL9A1-201ENST00000320755 TTC21BQ7Z4L5 1316 aa21.79■■□□□ 1.08
COL9A1-201ENST00000320755 AATKQ6ZMQ8 1374 aa21.79■■□□□ 1.08
COL9A1-201ENST00000320755 API5Q9BZZ5 524 aaKnown RBP21.79■■□□□ 1.08
COL9A1-201ENST00000320755 LTKP29376 864 aa21.78■■□□□ 1.08
COL9A1-201ENST00000320755 TNRQ92752 1358 aa21.78■■□□□ 1.08
COL9A1-201ENST00000320755 ABCC4O15439 1325 aa21.78■■□□□ 1.08
COL9A1-201ENST00000320755 FOXD4L1Q9NU39 408 aa21.78■■□□□ 1.08
COL9A1-201ENST00000320755 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.07
COL9A1-201ENST00000320755 BMP2KLQ5H9B9 411 aa21.76■■□□□ 1.07
COL9A1-201ENST00000320755 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
COL9A1-201ENST00000320755 CHMP5Q9NZZ3 219 aa21.75■■□□□ 1.07
COL9A1-201ENST00000320755 PTCH1Q13635 1447 aa21.75■■□□□ 1.07
COL9A1-201ENST00000320755 FOXO3O43524 673 aa21.74■■□□□ 1.07
COL9A1-201ENST00000320755 TBC1D9Q6ZT07 1266 aa21.74■■□□□ 1.07
COL9A1-201ENST00000320755 C16orf71Q8IYS4 520 aaPredicted RBP21.74■■□□□ 1.07
COL9A1-201ENST00000320755 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
COL9A1-201ENST00000320755 MCM4P33991 863 aa21.74■■□□□ 1.07
COL9A1-201ENST00000320755 HSP90AB1P08238 724 aaKnown RBP21.73■■□□□ 1.07
COL9A1-201ENST00000320755 RBM42Q9BTD8 480 aaKnown RBP21.73■■□□□ 1.07
COL9A1-201ENST00000320755 HSP90AA1P07900 732 aaKnown RBP21.72■■□□□ 1.07
COL9A1-201ENST00000320755 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
COL9A1-201ENST00000320755 DLG5Q8TDM6 1919 aa21.71■■□□□ 1.07
COL9A1-201ENST00000320755 RBM25P49756 843 aaKnown RBP21.71■■□□□ 1.07
COL9A1-201ENST00000320755 REREQ9P2R6 1566 aa21.71■■□□□ 1.07
COL9A1-201ENST00000320755 PIK3R4Q99570 1358 aa21.71■■□□□ 1.07
COL9A1-201ENST00000320755 SLC4A10Q6U841 1118 aa21.7■■□□□ 1.06
COL9A1-201ENST00000320755 SLC4A2P04920 1241 aa21.7■■□□□ 1.06
COL9A1-201ENST00000320755 NUTM2GQ5VZR2 741 aa21.7■■□□□ 1.06
COL9A1-201ENST00000320755 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
COL9A1-201ENST00000320755 CHL1O00533 1208 aa21.69■■□□□ 1.06
COL9A1-201ENST00000320755 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-201ENST00000320755 OTUD7AQ8TE49 926 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-201ENST00000320755 CD2BP2O95400 341 aaKnown RBP21.68■■□□□ 1.06
COL9A1-201ENST00000320755 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
COL9A1-201ENST00000320755 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
COL9A1-201ENST00000320755 MEIS3Q99687 375 aa21.67■■□□□ 1.06
COL9A1-201ENST00000320755 F6X3S4 739 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 AMPHP49418 695 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 PLEKHM2Q8IWE5 1019 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 GSPT1P15170 499 aaKnown RBP21.66■■□□□ 1.06
COL9A1-201ENST00000320755 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 TECPR2O15040 1411 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 KIF2CQ99661 725 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
COL9A1-201ENST00000320755 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
COL9A1-201ENST00000320755 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
COL9A1-201ENST00000320755 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
COL9A1-201ENST00000320755 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
COL9A1-201ENST00000320755 TSPYL4Q9UJ04 414 aa21.65■■□□□ 1.06
COL9A1-201ENST00000320755 TRAK2O60296 914 aa21.65■■□□□ 1.06
COL9A1-201ENST00000320755 CDC45O75419 566 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms