RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.8
CRAT-201ENST00000318080 HSCBQ8IWL3 235 aa20.06■□□□□ 0.8
CRAT-201ENST00000318080 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
CRAT-201ENST00000318080 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
CRAT-201ENST00000318080 ARHGAP23Q9P227 1491 aa20.06■□□□□ 0.8
CRAT-201ENST00000318080 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
CRAT-201ENST00000318080 RIPK4P57078 832 aa20.06■□□□□ 0.8
CRAT-201ENST00000318080 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
CRAT-201ENST00000318080 FBLN1P23142 703 aa20.05■□□□□ 0.8
CRAT-201ENST00000318080 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
CRAT-201ENST00000318080 SLIT1O75093 1534 aa20.05■□□□□ 0.8
CRAT-201ENST00000318080 TULP4Q9NRJ4 1543 aa20.05■□□□□ 0.8
CRAT-201ENST00000318080 KIAA1211Q6ZU35 1233 aa20.05■□□□□ 0.8
CRAT-201ENST00000318080 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
CRAT-201ENST00000318080 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
CRAT-201ENST00000318080 DDIT3P35638 169 aa20.04■□□□□ 0.8
CRAT-201ENST00000318080 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
CRAT-201ENST00000318080 ADGRB2O60241 1585 aa20.03■□□□□ 0.8
CRAT-201ENST00000318080 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
CRAT-201ENST00000318080 FGD1P98174 961 aa20.03■□□□□ 0.8
CRAT-201ENST00000318080 NUCB1Q02818 461 aa20.02■□□□□ 0.8
CRAT-201ENST00000318080 SETD1BQ9UPS6 1966 aaKnown RBP20.02■□□□□ 0.8
CRAT-201ENST00000318080 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
CRAT-201ENST00000318080 SRPK2P78362 688 aaKnown RBP20.01■□□□□ 0.79
CRAT-201ENST00000318080 RBM42Q9BTD8 480 aaKnown RBP20.01■□□□□ 0.79
CRAT-201ENST00000318080 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
CRAT-201ENST00000318080 HSPA2P54652 639 aa20.01■□□□□ 0.79
CRAT-201ENST00000318080 KIF2CQ99661 725 aa20■□□□□ 0.79
CRAT-201ENST00000318080 FYB1O15117 783 aa20■□□□□ 0.79
CRAT-201ENST00000318080 RBM33Q96EV2 1170 aaKnown RBP20■□□□□ 0.79
CRAT-201ENST00000318080 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
CRAT-201ENST00000318080 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
CRAT-201ENST00000318080 CHD1LQ86WJ1 897 aa20■□□□□ 0.79
CRAT-201ENST00000318080 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
CRAT-201ENST00000318080 USP32Q8NFA0 1604 aa19.99■□□□□ 0.79
CRAT-201ENST00000318080 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
CRAT-201ENST00000318080 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
CRAT-201ENST00000318080 PDE4CQ08493 712 aa19.99■□□□□ 0.79
CRAT-201ENST00000318080 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
CRAT-201ENST00000318080 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
CRAT-201ENST00000318080 ANKRD45Q5TZF3 282 aa19.98■□□□□ 0.79
CRAT-201ENST00000318080 NCOA3Q9Y6Q9 1424 aa19.98■□□□□ 0.79
CRAT-201ENST00000318080 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
CRAT-201ENST00000318080 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
CRAT-201ENST00000318080 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
CRAT-201ENST00000318080 MED14O60244 1454 aa19.97■□□□□ 0.79
CRAT-201ENST00000318080 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
CRAT-201ENST00000318080 NSD2O96028 1365 aa19.96■□□□□ 0.79
CRAT-201ENST00000318080 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
CRAT-201ENST00000318080 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
CRAT-201ENST00000318080 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
CRAT-201ENST00000318080 AMOTL2Q9Y2J4 779 aa19.96■□□□□ 0.79
CRAT-201ENST00000318080 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
CRAT-201ENST00000318080 SSFA2P28290 1259 aa19.95■□□□□ 0.78
CRAT-201ENST00000318080 TSPYL6Q8N831 410 aa19.95■□□□□ 0.78
CRAT-201ENST00000318080 SNX21Q969T3 373 aa19.95■□□□□ 0.78
CRAT-201ENST00000318080 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
CRAT-201ENST00000318080 DIAPH1O60610 1272 aaKnown RBP19.94■□□□□ 0.78
CRAT-201ENST00000318080 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
CRAT-201ENST00000318080 ZBTB7BO15156 539 aaPredicted RBP19.93■□□□□ 0.78
CRAT-201ENST00000318080 SIRT2Q8IXJ6 389 aa19.93■□□□□ 0.78
CRAT-201ENST00000318080 R3HCC1Q9Y3T6 440 aaKnown RBP19.93■□□□□ 0.78
CRAT-201ENST00000318080 KIF16BQ96L93 1317 aa19.93■□□□□ 0.78
CRAT-201ENST00000318080 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
CRAT-201ENST00000318080 KCNA6P17658 529 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 TBC1D9Q6ZT07 1266 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 IL16Q14005 1332 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 NCLP19338 710 aaKnown RBP19.92■□□□□ 0.78
CRAT-201ENST00000318080 RAB3GAP1Q15042 981 aa19.92■□□□□ 0.78
CRAT-201ENST00000318080 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
CRAT-201ENST00000318080 BMP2KLQ5H9B9 411 aa19.91■□□□□ 0.78
CRAT-201ENST00000318080 HMOX1P09601 288 aa19.91■□□□□ 0.78
CRAT-201ENST00000318080 NASPP49321 788 aaPredicted RBP19.91■□□□□ 0.78
CRAT-201ENST00000318080 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
CRAT-201ENST00000318080 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
CRAT-201ENST00000318080 CHAMP1Q96JM3 812 aa19.9■□□□□ 0.78
CRAT-201ENST00000318080 PDCL3Q9H2J4 239 aa19.9■□□□□ 0.78
CRAT-201ENST00000318080 TPM2P07951 284 aa19.89■□□□□ 0.77
CRAT-201ENST00000318080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
CRAT-201ENST00000318080 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
CRAT-201ENST00000318080 DLC1Q96QB1 1528 aa19.89■□□□□ 0.77
CRAT-201ENST00000318080 XPCQ01831 940 aaPredicted RBP19.89■□□□□ 0.77
CRAT-201ENST00000318080 VAMP4O75379 141 aa19.88■□□□□ 0.77
CRAT-201ENST00000318080 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
CRAT-201ENST00000318080 CD163L1Q9NR16 1453 aa19.87■□□□□ 0.77
CRAT-201ENST00000318080 TECPR2O15040 1411 aa19.87■□□□□ 0.77
CRAT-201ENST00000318080 CABP1Q9NZU7 370 aa19.87■□□□□ 0.77
CRAT-201ENST00000318080 MRPL50Q8N5N7 158 aaKnown RBP19.87■□□□□ 0.77
CRAT-201ENST00000318080 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
CRAT-201ENST00000318080 PRDM10Q9NQV6 1147 aa19.86■□□□□ 0.77
CRAT-201ENST00000318080 DDX49Q9Y6V7 483 aaKnown RBP19.86■□□□□ 0.77
CRAT-201ENST00000318080 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.86■□□□□ 0.77
CRAT-201ENST00000318080 CPS1P31327 1500 aa19.86■□□□□ 0.77
CRAT-201ENST00000318080 K7ELQ4 463 aaPredicted RBP19.85■□□□□ 0.77
CRAT-201ENST00000318080 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
CRAT-201ENST00000318080 PDIA4P13667 645 aaKnown RBP19.85■□□□□ 0.77
CRAT-201ENST00000318080 ZSCAN30Q86W11 494 aa19.85■□□□□ 0.77
CRAT-201ENST00000318080 BCL11BQ9C0K0 894 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms