RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
SMIM4-201ENST00000307106 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
SMIM4-201ENST00000307106 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
SMIM4-201ENST00000307106 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 SLC15A2Q16348 729 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 BCL9O00512 1426 aa17.44■□□□□ 0.38
SMIM4-201ENST00000307106 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
SMIM4-201ENST00000307106 TOM1L2Q6ZVM7 507 aa17.43■□□□□ 0.38
SMIM4-201ENST00000307106 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
SMIM4-201ENST00000307106 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
SMIM4-201ENST00000307106 SLIT3O75094 1523 aa17.42■□□□□ 0.38
SMIM4-201ENST00000307106 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
SMIM4-201ENST00000307106 PAPPAQ13219 1627 aa17.42■□□□□ 0.38
SMIM4-201ENST00000307106 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
SMIM4-201ENST00000307106 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
SMIM4-201ENST00000307106 BTAF1O14981 1849 aa17.41■□□□□ 0.38
SMIM4-201ENST00000307106 PIK3C2AO00443 1686 aa17.41■□□□□ 0.38
SMIM4-201ENST00000307106 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
SMIM4-201ENST00000307106 ARXQ96QS3 562 aa17.4■□□□□ 0.38
SMIM4-201ENST00000307106 QSER1Q2KHR3 1735 aa17.4■□□□□ 0.38
SMIM4-201ENST00000307106 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.38
SMIM4-201ENST00000307106 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
SMIM4-201ENST00000307106 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
SMIM4-201ENST00000307106 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
SMIM4-201ENST00000307106 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
SMIM4-201ENST00000307106 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
SMIM4-201ENST00000307106 WDR17Q8IZU2 1322 aa17.38■□□□□ 0.37
SMIM4-201ENST00000307106 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
SMIM4-201ENST00000307106 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
SMIM4-201ENST00000307106 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
SMIM4-201ENST00000307106 GPR162Q16538 588 aa17.36■□□□□ 0.37
SMIM4-201ENST00000307106 NLRP6P59044 892 aa17.35■□□□□ 0.37
SMIM4-201ENST00000307106 CEP350Q5VT06 3117 aa17.35■□□□□ 0.37
SMIM4-201ENST00000307106 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
SMIM4-201ENST00000307106 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
SMIM4-201ENST00000307106 USP6P35125 1406 aa17.34■□□□□ 0.37
SMIM4-201ENST00000307106 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
SMIM4-201ENST00000307106 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.36
SMIM4-201ENST00000307106 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
SMIM4-201ENST00000307106 TNS2Q63HR2 1409 aa17.32■□□□□ 0.36
SMIM4-201ENST00000307106 EXOC5O00471 708 aa17.32■□□□□ 0.36
SMIM4-201ENST00000307106 CARD10Q9BWT7 1032 aa17.31■□□□□ 0.36
SMIM4-201ENST00000307106 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SMIM4-201ENST00000307106 CSB-PGBD3P0DP91 1061 aa17.3■□□□□ 0.36
SMIM4-201ENST00000307106 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
SMIM4-201ENST00000307106 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
SMIM4-201ENST00000307106 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
SMIM4-201ENST00000307106 LTN1O94822 1766 aa17.29■□□□□ 0.36
SMIM4-201ENST00000307106 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
SMIM4-201ENST00000307106 ACSBG1Q96GR2 724 aa17.28■□□□□ 0.36
SMIM4-201ENST00000307106 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
SMIM4-201ENST00000307106 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
SMIM4-201ENST00000307106 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
SMIM4-201ENST00000307106 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
SMIM4-201ENST00000307106 SOX12O15370 315 aa17.25■□□□□ 0.35
SMIM4-201ENST00000307106 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
SMIM4-201ENST00000307106 NFAT5O94916 1531 aa17.25■□□□□ 0.35
SMIM4-201ENST00000307106 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
SMIM4-201ENST00000307106 POLD1P28340 1107 aa17.24■□□□□ 0.35
SMIM4-201ENST00000307106 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
SMIM4-201ENST00000307106 LY75O60449 1722 aa17.24■□□□□ 0.35
SMIM4-201ENST00000307106 LRRC4BQ9NT99 713 aa17.23■□□□□ 0.35
SMIM4-201ENST00000307106 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
SMIM4-201ENST00000307106 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
SMIM4-201ENST00000307106 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
SMIM4-201ENST00000307106 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
SMIM4-201ENST00000307106 DOT1LQ8TEK3 1739 aa17.2■□□□□ 0.34
SMIM4-201ENST00000307106 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
SMIM4-201ENST00000307106 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
SMIM4-201ENST00000307106 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
SMIM4-201ENST00000307106 ATP10DQ9P241 1426 aa17.19■□□□□ 0.34
SMIM4-201ENST00000307106 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
SMIM4-201ENST00000307106 YBX3P16989 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMIM4-201ENST00000307106 IL2RBP14784 551 aa17.17■□□□□ 0.34
SMIM4-201ENST00000307106 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
SMIM4-201ENST00000307106 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
SMIM4-201ENST00000307106 SLC27A3Q5K4L6 730 aa17.16■□□□□ 0.34
SMIM4-201ENST00000307106 ERBB3P21860 1342 aa17.16■□□□□ 0.34
SMIM4-201ENST00000307106 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
SMIM4-201ENST00000307106 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
SMIM4-201ENST00000307106 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
SMIM4-201ENST00000307106 HSPA6P17066 643 aa17.14■□□□□ 0.33
SMIM4-201ENST00000307106 GPBP1L1Q9HC44 474 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-201ENST00000307106 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
SMIM4-201ENST00000307106 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
SMIM4-201ENST00000307106 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
SMIM4-201ENST00000307106 C5P01031 1676 aa17.12■□□□□ 0.33
SMIM4-201ENST00000307106 KCNQ4P56696 695 aa17.11■□□□□ 0.33
SMIM4-201ENST00000307106 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
SMIM4-201ENST00000307106 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
SMIM4-201ENST00000307106 ADCY9O60503 1353 aa17.09■□□□□ 0.33
SMIM4-201ENST00000307106 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
SMIM4-201ENST00000307106 MSH5O43196 834 aa17.07■□□□□ 0.32
SMIM4-201ENST00000307106 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
SMIM4-201ENST00000307106 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
SMIM4-201ENST00000307106 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
SMIM4-201ENST00000307106 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms