RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
RETREG1-201ENST00000306320 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
RETREG1-201ENST00000306320 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
RETREG1-201ENST00000306320 RBM27Q9P2N5 1060 aaKnown RBP22.21■■□□□ 1.15
RETREG1-201ENST00000306320 TSPYL6Q8N831 410 aa22.21■■□□□ 1.15
RETREG1-201ENST00000306320 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
RETREG1-201ENST00000306320 CAMSAP1Q5T5Y3 1602 aa22.2■■□□□ 1.15
RETREG1-201ENST00000306320 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
RETREG1-201ENST00000306320 CCDC173Q0VFZ6 552 aa22.2■■□□□ 1.14
RETREG1-201ENST00000306320 NEXMIFQ5QGS0 1516 aa22.2■■□□□ 1.14
RETREG1-201ENST00000306320 PPLO60437 1756 aa22.2■■□□□ 1.14
RETREG1-201ENST00000306320 NOL8Q76FK4 1167 aaKnown RBP22.19■■□□□ 1.14
RETREG1-201ENST00000306320 FAM177BA6PVY3 158 aa22.19■■□□□ 1.14
RETREG1-201ENST00000306320 JARID2Q92833 1246 aaPredicted RBP22.19■■□□□ 1.14
RETREG1-201ENST00000306320 TSC1Q92574 1164 aa22.19■■□□□ 1.14
RETREG1-201ENST00000306320 PLCB2Q00722 1185 aa22.18■■□□□ 1.14
RETREG1-201ENST00000306320 NUTM2GQ5VZR2 741 aa22.18■■□□□ 1.14
RETREG1-201ENST00000306320 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.18■■□□□ 1.14
RETREG1-201ENST00000306320 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
RETREG1-201ENST00000306320 GAS2L2Q8NHY3 880 aa22.17■■□□□ 1.14
RETREG1-201ENST00000306320 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
RETREG1-201ENST00000306320 IFT172Q9UG01 1749 aa22.17■■□□□ 1.14
RETREG1-201ENST00000306320 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
RETREG1-201ENST00000306320 NUDT16Q96DE0 195 aaKnown RBP22.16■■□□□ 1.14
RETREG1-201ENST00000306320 PRPF40AO75400 957 aaKnown RBP22.16■■□□□ 1.14
RETREG1-201ENST00000306320 AEBP1Q8IUX7 1158 aa22.16■■□□□ 1.14
RETREG1-201ENST00000306320 BCL11BQ9C0K0 894 aaPredicted RBP22.16■■□□□ 1.14
RETREG1-201ENST00000306320 PIK3C2BO00750 1634 aa22.16■■□□□ 1.14
RETREG1-201ENST00000306320 NEO1Q92859 1461 aa22.15■■□□□ 1.14
RETREG1-201ENST00000306320 METP08581 1390 aa22.15■■□□□ 1.14
RETREG1-201ENST00000306320 ABCC11Q96J66 1382 aa22.15■■□□□ 1.14
RETREG1-201ENST00000306320 SKOR2Q2VWA4 1001 aaPredicted RBP22.14■■□□□ 1.14
RETREG1-201ENST00000306320 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
RETREG1-201ENST00000306320 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
RETREG1-201ENST00000306320 ZNF692Q9BU19 519 aaPredicted RBP22.14■■□□□ 1.13
RETREG1-201ENST00000306320 ATAD2Q6PL18 1390 aa22.13■■□□□ 1.13
RETREG1-201ENST00000306320 PKP1Q13835 747 aa22.12■■□□□ 1.13
RETREG1-201ENST00000306320 ATF7IPQ6VMQ6 1270 aa22.12■■□□□ 1.13
RETREG1-201ENST00000306320 WASLO00401 505 aaPredicted RBP22.11■■□□□ 1.13
RETREG1-201ENST00000306320 OFD1O75665 1012 aa22.11■■□□□ 1.13
RETREG1-201ENST00000306320 RAB3GAP1Q15042 981 aa22.11■■□□□ 1.13
RETREG1-201ENST00000306320 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
RETREG1-201ENST00000306320 K7ELQ4 463 aaPredicted RBP22.11■■□□□ 1.13
RETREG1-201ENST00000306320 COG3Q96JB2 828 aa22.11■■□□□ 1.13
RETREG1-201ENST00000306320 BAG4O95429 457 aaKnown RBP22.1■■□□□ 1.13
RETREG1-201ENST00000306320 RIMS2Q9UQ26 1411 aa22.1■■□□□ 1.13
RETREG1-201ENST00000306320 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
RETREG1-201ENST00000306320 NGEFQ8N5V2 710 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 RBSNQ9H1K0 784 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 PTPRMP28827 1452 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 SYCE3A1L190 88 aa22.09■■□□□ 1.13
RETREG1-201ENST00000306320 MCM10Q7L590 875 aa22.08■■□□□ 1.12
RETREG1-201ENST00000306320 IGSF3O75054 1194 aa22.07■■□□□ 1.12
RETREG1-201ENST00000306320 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
RETREG1-201ENST00000306320 DDX19BQ9UMR2 479 aa22.07■■□□□ 1.12
RETREG1-201ENST00000306320 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
RETREG1-201ENST00000306320 ZNF830Q96NB3 372 aaPredicted RBP22.07■■□□□ 1.12
RETREG1-201ENST00000306320 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
RETREG1-201ENST00000306320 NECTIN2Q92692 538 aa22.07■■□□□ 1.12
RETREG1-201ENST00000306320 LTV1Q96GA3 475 aaPredicted RBP22.06■■□□□ 1.12
RETREG1-201ENST00000306320 CBX1P83916 185 aa22.06■■□□□ 1.12
RETREG1-201ENST00000306320 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
RETREG1-201ENST00000306320 ZSCAN23Q3MJ62 389 aa22.05■■□□□ 1.12
RETREG1-201ENST00000306320 CD163L1Q9NR16 1453 aa22.05■■□□□ 1.12
RETREG1-201ENST00000306320 CHD1LQ86WJ1 897 aa22.05■■□□□ 1.12
RETREG1-201ENST00000306320 IQSEC2Q5JU85 1478 aa22.05■■□□□ 1.12
RETREG1-201ENST00000306320 HSP90AB2PQ58FF8 381 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
RETREG1-201ENST00000306320 PPIP5K1Q6PFW1 1433 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 TBC1D9Q6ZT07 1266 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 SMC5Q8IY18 1101 aa22.04■■□□□ 1.12
RETREG1-201ENST00000306320 FCHSD2O94868 740 aa22.03■■□□□ 1.12
RETREG1-201ENST00000306320 ZC3H13Q5T200 1668 aaKnown RBP22.03■■□□□ 1.12
RETREG1-201ENST00000306320 MYO3AQ8NEV4 1616 aa22.03■■□□□ 1.12
RETREG1-201ENST00000306320 LTKP29376 864 aa22.03■■□□□ 1.12
RETREG1-201ENST00000306320 CCDC61Q9Y6R9 512 aa22.03■■□□□ 1.12
RETREG1-201ENST00000306320 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
RETREG1-201ENST00000306320 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
RETREG1-201ENST00000306320 ALKQ9UM73 1620 aa22.02■■□□□ 1.12
RETREG1-201ENST00000306320 NSD2O96028 1365 aa22.02■■□□□ 1.12
RETREG1-201ENST00000306320 FOXO3O43524 673 aa22.02■■□□□ 1.11
RETREG1-201ENST00000306320 C17orf53Q8N3J3 647 aaPredicted RBP22.02■■□□□ 1.11
RETREG1-201ENST00000306320 NFE2L2Q16236 605 aa22.01■■□□□ 1.11
RETREG1-201ENST00000306320 ZGPATQ8N5A5 531 aaKnown RBP22.01■■□□□ 1.11
RETREG1-201ENST00000306320 ARHGAP31Q2M1Z3 1444 aa22■■□□□ 1.11
RETREG1-201ENST00000306320 NINLQ9Y2I6 1382 aa22■■□□□ 1.11
RETREG1-201ENST00000306320 KLHL40Q2TBA0 621 aa22■■□□□ 1.11
RETREG1-201ENST00000306320 IL13P35225 146 aa21.99■■□□□ 1.11
RETREG1-201ENST00000306320 TWISTNBQ3B726 338 aaPredicted RBP21.99■■□□□ 1.11
RETREG1-201ENST00000306320 RICTORQ6R327 1708 aa21.99■■□□□ 1.11
RETREG1-201ENST00000306320 AK9Q5TCS8 1911 aa21.99■■□□□ 1.11
RETREG1-201ENST00000306320 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
RETREG1-201ENST00000306320 PRDM4Q9UKN5 801 aa21.98■■□□□ 1.11
RETREG1-201ENST00000306320 CIZ1Q9ULV3 898 aaPredicted RBP21.98■■□□□ 1.11
RETREG1-201ENST00000306320 NEURL4Q96JN8 1562 aa21.98■■□□□ 1.11
RETREG1-201ENST00000306320 PUS7Q96PZ0 661 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms