RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 NR5A1Q13285 461 aa9.34□□□□□ -0.91
CSN3-201ENST00000304954 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
CSN3-201ENST00000304954 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
CSN3-201ENST00000304954 FOXC1Q12948 553 aa9.33□□□□□ -0.92
CSN3-201ENST00000304954 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
CSN3-201ENST00000304954 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
CSN3-201ENST00000304954 KCTD15Q96SI1 283 aaPredicted RBP9.33□□□□□ -0.92
CSN3-201ENST00000304954 SIAH2O43255 324 aa9.32□□□□□ -0.92
CSN3-201ENST00000304954 ADH1CP00326 375 aa9.32□□□□□ -0.92
CSN3-201ENST00000304954 ARID5BQ14865 1188 aa9.32□□□□□ -0.92
CSN3-201ENST00000304954 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
CSN3-201ENST00000304954 ESPNB1AK53 854 aa9.31□□□□□ -0.92
CSN3-201ENST00000304954 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
CSN3-201ENST00000304954 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
CSN3-201ENST00000304954 TTC24A2A3L6 582 aaPredicted RBP9.3□□□□□ -0.92
CSN3-201ENST00000304954 GDF9O60383 454 aa9.3□□□□□ -0.92
CSN3-201ENST00000304954 ADAMTS19Q8TE59 1207 aa9.3□□□□□ -0.92
CSN3-201ENST00000304954 PKD2L1Q9P0L9 805 aa9.3□□□□□ -0.92
CSN3-201ENST00000304954 ATP9BO43861 1147 aa9.29□□□□□ -0.92
CSN3-201ENST00000304954 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
CSN3-201ENST00000304954 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
CSN3-201ENST00000304954 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
CSN3-201ENST00000304954 ESF1Q9H501 851 aaKnown RBP9.28□□□□□ -0.92
CSN3-201ENST00000304954 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
CSN3-201ENST00000304954 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
CSN3-201ENST00000304954 SKIP12755 728 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 FSHRP23945 695 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 LAPTM4AQ15012 233 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 CCDC116Q8IYX3 515 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 PHTF2Q8N3S3 785 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 EMILIN1Q9Y6C2 1016 aa9.27□□□□□ -0.93
CSN3-201ENST00000304954 PALM3A6NDB9 673 aaPredicted RBP9.26□□□□□ -0.93
CSN3-201ENST00000304954 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
CSN3-201ENST00000304954 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
CSN3-201ENST00000304954 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
CSN3-201ENST00000304954 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
CSN3-201ENST00000304954 PPP1R15AO75807 674 aaPredicted RBP9.25□□□□□ -0.93
CSN3-201ENST00000304954 MYCP01106 439 aaPredicted RBP9.25□□□□□ -0.93
CSN3-201ENST00000304954 GRM5P41594 1212 aa9.25□□□□□ -0.93
CSN3-201ENST00000304954 USP4Q13107 963 aa9.25□□□□□ -0.93
CSN3-201ENST00000304954 EML3Q32P44 896 aa9.25□□□□□ -0.93
CSN3-201ENST00000304954 INTS6LQ5JSJ4 861 aaKnown RBP9.25□□□□□ -0.93
CSN3-201ENST00000304954 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
CSN3-201ENST00000304954 TNFRSF10AO00220 468 aa9.24□□□□□ -0.93
CSN3-201ENST00000304954 UCN2Q96RP3 112 aa9.24□□□□□ -0.93
CSN3-201ENST00000304954 TFIP11Q9UBB9 837 aaKnown RBP9.24□□□□□ -0.93
CSN3-201ENST00000304954 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
CSN3-201ENST00000304954 NNTQ13423 1086 aa9.23□□□□□ -0.93
CSN3-201ENST00000304954 TRIM50Q86XT4 487 aa9.23□□□□□ -0.93
CSN3-201ENST00000304954 PCDHB11Q9Y5F2 797 aa9.23□□□□□ -0.93
CSN3-201ENST00000304954 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
CSN3-201ENST00000304954 ATP5J2-PTCD1G3V325 749 aa9.22□□□□□ -0.93
CSN3-201ENST00000304954 MYT1Q01538 1121 aa9.22□□□□□ -0.93
CSN3-201ENST00000304954 TBC1D9Q6ZT07 1266 aa9.22□□□□□ -0.93
CSN3-201ENST00000304954 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
CSN3-201ENST00000304954 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 ERVH48-1M5A8F1 160 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
CSN3-201ENST00000304954 ATP1A2P50993 1020 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 TRIM67Q6ZTA4 783 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
CSN3-201ENST00000304954 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
CSN3-201ENST00000304954 RAB15P59190 212 aa9.2□□□□□ -0.94
CSN3-201ENST00000304954 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
CSN3-201ENST00000304954 PBXIP1Q96AQ6 731 aa9.2□□□□□ -0.94
CSN3-201ENST00000304954 CCDC85AQ96PX6 553 aaPredicted RBP9.2□□□□□ -0.94
CSN3-201ENST00000304954 ARID3AQ99856 593 aa9.2□□□□□ -0.94
CSN3-201ENST00000304954 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
CSN3-201ENST00000304954 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
CSN3-201ENST00000304954 NRG2O14511 850 aaPredicted RBP9.19□□□□□ -0.94
CSN3-201ENST00000304954 NCOA4Q13772 614 aa9.19□□□□□ -0.94
CSN3-201ENST00000304954 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
CSN3-201ENST00000304954 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
CSN3-201ENST00000304954 SMPD1P17405 629 aa9.18□□□□□ -0.94
CSN3-201ENST00000304954 ERVK-9P63128 1117 aa9.18□□□□□ -0.94
CSN3-201ENST00000304954 PDE4CQ08493 712 aa9.18□□□□□ -0.94
CSN3-201ENST00000304954 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
CSN3-201ENST00000304954 J3QL48 77 aa9.17□□□□□ -0.94
CSN3-201ENST00000304954 DGAT1O75907 488 aa9.17□□□□□ -0.94
CSN3-201ENST00000304954 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
CSN3-201ENST00000304954 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
CSN3-201ENST00000304954 GFRA3O60609 400 aa9.16□□□□□ -0.94
CSN3-201ENST00000304954 NR3C2P08235 984 aa9.16□□□□□ -0.94
CSN3-201ENST00000304954 CTC1Q2NKJ3 1217 aa9.16□□□□□ -0.94
CSN3-201ENST00000304954 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
CSN3-201ENST00000304954 LARP1Q6PKG0 1096 aaKnown RBP9.16□□□□□ -0.94
CSN3-201ENST00000304954 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
CSN3-201ENST00000304954 FAM187AA6NFU0 413 aa9.15□□□□□ -0.94
CSN3-201ENST00000304954 RFX1P22670 979 aa9.15□□□□□ -0.94
CSN3-201ENST00000304954 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
CSN3-201ENST00000304954 FAM196BA6NMK8 535 aa9.14□□□□□ -0.95
CSN3-201ENST00000304954 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
CSN3-201ENST00000304954 AVPP01185 164 aa9.14□□□□□ -0.95
CSN3-201ENST00000304954 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms