RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
SDC2-201ENST00000302190 MCM4P33991 863 aa17.38■□□□□ 0.37
SDC2-201ENST00000302190 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
SDC2-201ENST00000302190 IFT172Q9UG01 1749 aa17.38■□□□□ 0.37
SDC2-201ENST00000302190 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
SDC2-201ENST00000302190 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
SDC2-201ENST00000302190 AMPHP49418 695 aa17.37■□□□□ 0.37
SDC2-201ENST00000302190 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
SDC2-201ENST00000302190 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
SDC2-201ENST00000302190 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
SDC2-201ENST00000302190 STK31Q9BXU1 1019 aa17.37■□□□□ 0.37
SDC2-201ENST00000302190 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
SDC2-201ENST00000302190 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
SDC2-201ENST00000302190 PTPRMP28827 1452 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 KCNA6P17658 529 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 MPNDQ8N594 471 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 ASXL1Q8IXJ9 1541 aa17.35■□□□□ 0.37
SDC2-201ENST00000302190 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
SDC2-201ENST00000302190 EIF2S2P20042 333 aaKnown RBP17.34■□□□□ 0.37
SDC2-201ENST00000302190 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
SDC2-201ENST00000302190 NRXN1Q9ULB1 1477 aa17.34■□□□□ 0.37
SDC2-201ENST00000302190 KDM4FA0A1W2PPD8 638 aa17.33■□□□□ 0.37
SDC2-201ENST00000302190 GNAI1P63096 354 aa17.33■□□□□ 0.37
SDC2-201ENST00000302190 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.37
SDC2-201ENST00000302190 A0A0G2JS52 829 aa17.33■□□□□ 0.36
SDC2-201ENST00000302190 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
SDC2-201ENST00000302190 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
SDC2-201ENST00000302190 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
SDC2-201ENST00000302190 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
SDC2-201ENST00000302190 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
SDC2-201ENST00000302190 ZFYVE9O95405 1425 aa17.32■□□□□ 0.36
SDC2-201ENST00000302190 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
SDC2-201ENST00000302190 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 ROBO2Q9HCK4 1378 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
SDC2-201ENST00000302190 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
SDC2-201ENST00000302190 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 ST18O60284 1047 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 NME9Q86XW9 330 aa17.31■□□□□ 0.36
SDC2-201ENST00000302190 RRP9O43818 475 aaKnown RBP17.3■□□□□ 0.36
SDC2-201ENST00000302190 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
SDC2-201ENST00000302190 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
SDC2-201ENST00000302190 HMMRO75330 724 aa17.3■□□□□ 0.36
SDC2-201ENST00000302190 MCCP23508 829 aa17.29■□□□□ 0.36
SDC2-201ENST00000302190 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
SDC2-201ENST00000302190 MCM10Q7L590 875 aa17.29■□□□□ 0.36
SDC2-201ENST00000302190 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
SDC2-201ENST00000302190 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
SDC2-201ENST00000302190 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
SDC2-201ENST00000302190 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
SDC2-201ENST00000302190 FYB1O15117 783 aa17.27■□□□□ 0.36
SDC2-201ENST00000302190 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
SDC2-201ENST00000302190 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
SDC2-201ENST00000302190 QRICH2Q9H0J4 1663 aa17.27■□□□□ 0.35
SDC2-201ENST00000302190 CDC45O75419 566 aa17.26■□□□□ 0.35
SDC2-201ENST00000302190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.26■□□□□ 0.35
SDC2-201ENST00000302190 FGD1P98174 961 aa17.26■□□□□ 0.35
SDC2-201ENST00000302190 KIAA1211Q6ZU35 1233 aa17.26■□□□□ 0.35
SDC2-201ENST00000302190 TSPYL6Q8N831 410 aa17.26■□□□□ 0.35
SDC2-201ENST00000302190 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
SDC2-201ENST00000302190 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
SDC2-201ENST00000302190 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
SDC2-201ENST00000302190 MRE11P49959 708 aa17.25■□□□□ 0.35
SDC2-201ENST00000302190 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
SDC2-201ENST00000302190 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
SDC2-201ENST00000302190 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
SDC2-201ENST00000302190 NEK4P51957 841 aa17.25■□□□□ 0.35
SDC2-201ENST00000302190 RRAGDQ9NQL2 400 aaPredicted RBP17.25■□□□□ 0.35
SDC2-201ENST00000302190 F6X3S4 739 aa17.24■□□□□ 0.35
SDC2-201ENST00000302190 AAMPQ13685 434 aa17.24■□□□□ 0.35
SDC2-201ENST00000302190 WASLO00401 505 aaPredicted RBP17.24■□□□□ 0.35
SDC2-201ENST00000302190 GRPEL1Q9HAV7 217 aa17.24■□□□□ 0.35
SDC2-201ENST00000302190 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
SDC2-201ENST00000302190 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
SDC2-201ENST00000302190 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
SDC2-201ENST00000302190 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
SDC2-201ENST00000302190 SSFA2P28290 1259 aa17.23■□□□□ 0.35
SDC2-201ENST00000302190 TULP4Q9NRJ4 1543 aa17.23■□□□□ 0.35
SDC2-201ENST00000302190 NLRP1Q9C000 1473 aa17.22■□□□□ 0.35
SDC2-201ENST00000302190 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
SDC2-201ENST00000302190 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
SDC2-201ENST00000302190 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
SDC2-201ENST00000302190 FCHSD2O94868 740 aa17.22■□□□□ 0.35
SDC2-201ENST00000302190 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
SDC2-201ENST00000302190 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
SDC2-201ENST00000302190 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
SDC2-201ENST00000302190 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
SDC2-201ENST00000302190 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
SDC2-201ENST00000302190 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
SDC2-201ENST00000302190 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
SDC2-201ENST00000302190 MYO3AQ8NEV4 1616 aa17.2■□□□□ 0.34
SDC2-201ENST00000302190 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
SDC2-201ENST00000302190 GOLGA6L4A6NEF3 574 aa17.2■□□□□ 0.34
SDC2-201ENST00000302190 REC8O95072 547 aa17.2■□□□□ 0.34
SDC2-201ENST00000302190 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
SDC2-201ENST00000302190 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms