RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PLCH2O75038 1416 aa17.97■□□□□ 0.47
COL6A2-201ENST00000300527 TSHZ3Q63HK5 1081 aa17.97■□□□□ 0.47
COL6A2-201ENST00000300527 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
COL6A2-201ENST00000300527 TWISTNBQ3B726 338 aaPredicted RBP17.97■□□□□ 0.47
COL6A2-201ENST00000300527 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
COL6A2-201ENST00000300527 C17orf53Q8N3J3 647 aaPredicted RBP17.97■□□□□ 0.47
COL6A2-201ENST00000300527 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
COL6A2-201ENST00000300527 VAMP4O75379 141 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 FYB1O15117 783 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 USP26Q9BXU7 913 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 SPHKAPQ2M3C7 1700 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 CHMP4BQ9H444 224 aaKnown RBP17.96■□□□□ 0.47
COL6A2-201ENST00000300527 CCDC39Q9UFE4 941 aa17.96■□□□□ 0.47
COL6A2-201ENST00000300527 FAM83GA6ND36 823 aa17.95■□□□□ 0.46
COL6A2-201ENST00000300527 SDSP20132 328 aa17.95■□□□□ 0.46
COL6A2-201ENST00000300527 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
COL6A2-201ENST00000300527 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
COL6A2-201ENST00000300527 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
COL6A2-201ENST00000300527 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
COL6A2-201ENST00000300527 LRSAM1Q6UWE0 723 aa17.94■□□□□ 0.46
COL6A2-201ENST00000300527 MAP7D2Q96T17 732 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 ANKRD36BQ8N2N9 1353 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 TERF2IPQ9NYB0 399 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 ZDHHC9Q9Y397 364 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 DTNBO60941 627 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
COL6A2-201ENST00000300527 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-201ENST00000300527 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
COL6A2-201ENST00000300527 SASS6Q6UVJ0 657 aa17.92■□□□□ 0.46
COL6A2-201ENST00000300527 IL16Q14005 1332 aa17.92■□□□□ 0.46
COL6A2-201ENST00000300527 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
COL6A2-201ENST00000300527 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
COL6A2-201ENST00000300527 CBX1P83916 185 aa17.91■□□□□ 0.46
COL6A2-201ENST00000300527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL6A2-201ENST00000300527 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
COL6A2-201ENST00000300527 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
COL6A2-201ENST00000300527 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
COL6A2-201ENST00000300527 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
COL6A2-201ENST00000300527 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
COL6A2-201ENST00000300527 CABP1Q9NZU7 370 aa17.9■□□□□ 0.46
COL6A2-201ENST00000300527 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
COL6A2-201ENST00000300527 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
COL6A2-201ENST00000300527 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.46
COL6A2-201ENST00000300527 PRAM1Q96QH2 718 aa17.89■□□□□ 0.46
COL6A2-201ENST00000300527 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.46
COL6A2-201ENST00000300527 SBNO2Q9Y2G9 1366 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 API5Q9BZZ5 524 aaKnown RBP17.89■□□□□ 0.45
COL6A2-201ENST00000300527 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 GNAI1P63096 354 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
COL6A2-201ENST00000300527 REC8O95072 547 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 PRDM4Q9UKN5 801 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 IBTKQ9P2D0 1353 aaPredicted RBP17.88■□□□□ 0.45
COL6A2-201ENST00000300527 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 NFE2L2Q16236 605 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 LARP6Q9BRS8 491 aaKnown RBP17.88■□□□□ 0.45
COL6A2-201ENST00000300527 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 FCHSD2O94868 740 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 CYP2E1P05181 493 aaPredicted RBP17.88■□□□□ 0.45
COL6A2-201ENST00000300527 CLEC17AQ6ZS10 378 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
COL6A2-201ENST00000300527 GADD45BO75293 160 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-201ENST00000300527 ERC2O15083 957 aa17.86■□□□□ 0.45
COL6A2-201ENST00000300527 SOX12O15370 315 aa17.86■□□□□ 0.45
COL6A2-201ENST00000300527 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
COL6A2-201ENST00000300527 MBD3O95983 291 aa17.85■□□□□ 0.45
COL6A2-201ENST00000300527 TERF1P54274 439 aa17.85■□□□□ 0.45
COL6A2-201ENST00000300527 MEIS3Q99687 375 aa17.85■□□□□ 0.45
COL6A2-201ENST00000300527 IGSF3O75054 1194 aa17.85■□□□□ 0.45
COL6A2-201ENST00000300527 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
COL6A2-201ENST00000300527 SPDYE4A6NLX3 237 aa17.84■□□□□ 0.45
COL6A2-201ENST00000300527 EXOC6BQ9Y2D4 811 aa17.84■□□□□ 0.45
COL6A2-201ENST00000300527 NSD2O96028 1365 aa17.84■□□□□ 0.45
COL6A2-201ENST00000300527 MYOM2P54296 1465 aa17.84■□□□□ 0.45
COL6A2-201ENST00000300527 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL6A2-201ENST00000300527 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
COL6A2-201ENST00000300527 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.45
COL6A2-201ENST00000300527 ABCC1P33527 1531 aa17.83■□□□□ 0.44
COL6A2-201ENST00000300527 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
COL6A2-201ENST00000300527 SYAP1Q96A49 352 aaPredicted RBP17.83■□□□□ 0.44
COL6A2-201ENST00000300527 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
COL6A2-201ENST00000300527 ABCC4O15439 1325 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 HCLS1P14317 486 aaPredicted RBP17.82■□□□□ 0.44
COL6A2-201ENST00000300527 SPC24Q8NBT2 197 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 POLKQ9UBT6 870 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
COL6A2-201ENST00000300527 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
COL6A2-201ENST00000300527 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
COL6A2-201ENST00000300527 F6X3S4 739 aa17.81■□□□□ 0.44
COL6A2-201ENST00000300527 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
COL6A2-201ENST00000300527 CEP85Q6P2H3 762 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms