RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
CDH8-201ENST00000299345 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
CDH8-201ENST00000299345 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
CDH8-201ENST00000299345 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
CDH8-201ENST00000299345 TMEM2Q9UHN6 1383 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 ACEP12821 1306 aa17.11■□□□□ 0.33
CDH8-201ENST00000299345 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
CDH8-201ENST00000299345 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
CDH8-201ENST00000299345 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
CDH8-201ENST00000299345 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
CDH8-201ENST00000299345 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
CDH8-201ENST00000299345 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
CDH8-201ENST00000299345 USP19O94966 1318 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 TBC1D32Q96NH3 1257 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 GSE1Q14687 1217 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
CDH8-201ENST00000299345 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
CDH8-201ENST00000299345 PRR36Q9H6K5 1346 aa17.08■□□□□ 0.32
CDH8-201ENST00000299345 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
CDH8-201ENST00000299345 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.32
CDH8-201ENST00000299345 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
CDH8-201ENST00000299345 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
CDH8-201ENST00000299345 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
CDH8-201ENST00000299345 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
CDH8-201ENST00000299345 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
CDH8-201ENST00000299345 LTKP29376 864 aa17.06■□□□□ 0.32
CDH8-201ENST00000299345 AMPHP49418 695 aa17.06■□□□□ 0.32
CDH8-201ENST00000299345 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
CDH8-201ENST00000299345 GCC1Q96CN9 775 aa17.06■□□□□ 0.32
CDH8-201ENST00000299345 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
CDH8-201ENST00000299345 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
CDH8-201ENST00000299345 NUCB1Q02818 461 aa17.05■□□□□ 0.32
CDH8-201ENST00000299345 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
CDH8-201ENST00000299345 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
CDH8-201ENST00000299345 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
CDH8-201ENST00000299345 MCM10Q7L590 875 aa17.04■□□□□ 0.32
CDH8-201ENST00000299345 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
CDH8-201ENST00000299345 ANKRD26Q9UPS8 1709 aa17.03■□□□□ 0.32
CDH8-201ENST00000299345 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
CDH8-201ENST00000299345 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
CDH8-201ENST00000299345 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
CDH8-201ENST00000299345 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
CDH8-201ENST00000299345 THEMISQ8N1K5 641 aaPredicted RBP17.01■□□□□ 0.31
CDH8-201ENST00000299345 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
CDH8-201ENST00000299345 CPS1P31327 1500 aa17■□□□□ 0.31
CDH8-201ENST00000299345 TECPR2O15040 1411 aa17■□□□□ 0.31
CDH8-201ENST00000299345 NLRP6P59044 892 aa17■□□□□ 0.31
CDH8-201ENST00000299345 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
CDH8-201ENST00000299345 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
CDH8-201ENST00000299345 APBB1O00213 710 aa16.98■□□□□ 0.31
CDH8-201ENST00000299345 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
CDH8-201ENST00000299345 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
CDH8-201ENST00000299345 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
CDH8-201ENST00000299345 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
CDH8-201ENST00000299345 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
CDH8-201ENST00000299345 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
CDH8-201ENST00000299345 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CDH8-201ENST00000299345 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
CDH8-201ENST00000299345 ABCC4O15439 1325 aa16.97■□□□□ 0.31
CDH8-201ENST00000299345 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
CDH8-201ENST00000299345 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
CDH8-201ENST00000299345 BMP2KLQ5H9B9 411 aa16.96■□□□□ 0.31
CDH8-201ENST00000299345 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
CDH8-201ENST00000299345 ADAMTS13Q76LX8 1427 aa16.96■□□□□ 0.31
CDH8-201ENST00000299345 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
CDH8-201ENST00000299345 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
CDH8-201ENST00000299345 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
CDH8-201ENST00000299345 CHL1O00533 1208 aa16.95■□□□□ 0.3
CDH8-201ENST00000299345 USP6P35125 1406 aa16.94■□□□□ 0.3
CDH8-201ENST00000299345 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
CDH8-201ENST00000299345 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
CDH8-201ENST00000299345 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
CDH8-201ENST00000299345 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
CDH8-201ENST00000299345 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
CDH8-201ENST00000299345 FOXO3O43524 673 aa16.92■□□□□ 0.3
CDH8-201ENST00000299345 ABTB2Q8N961 1025 aa16.92■□□□□ 0.3
CDH8-201ENST00000299345 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
CDH8-201ENST00000299345 HMMRO75330 724 aa16.92■□□□□ 0.3
CDH8-201ENST00000299345 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
CDH8-201ENST00000299345 MTHFSDQ2M296 383 aaKnown RBP16.92■□□□□ 0.3
CDH8-201ENST00000299345 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
CDH8-201ENST00000299345 FLT4P35916 1363 aa16.91■□□□□ 0.3
CDH8-201ENST00000299345 CDC45O75419 566 aa16.91■□□□□ 0.3
CDH8-201ENST00000299345 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
CDH8-201ENST00000299345 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
CDH8-201ENST00000299345 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
CDH8-201ENST00000299345 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
CDH8-201ENST00000299345 PTPRCP08575 1304 aa16.9■□□□□ 0.3
CDH8-201ENST00000299345 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
CDH8-201ENST00000299345 ARXQ96QS3 562 aa16.9■□□□□ 0.3
CDH8-201ENST00000299345 EYA1Q99502 592 aa16.89■□□□□ 0.29
CDH8-201ENST00000299345 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
CDH8-201ENST00000299345 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms