RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 BECN1Q14457 450 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 CCDC27Q2M243 656 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
TTC39B-201ENST00000297615 DDX19BQ9UMR2 479 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
TTC39B-201ENST00000297615 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 KIAA1210Q9ULL0 1709 aa17.05■□□□□ 0.32
TTC39B-201ENST00000297615 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
TTC39B-201ENST00000297615 ANXA1P04083 346 aa17.04■□□□□ 0.32
TTC39B-201ENST00000297615 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
TTC39B-201ENST00000297615 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
TTC39B-201ENST00000297615 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
TTC39B-201ENST00000297615 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
TTC39B-201ENST00000297615 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
TTC39B-201ENST00000297615 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
TTC39B-201ENST00000297615 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
TTC39B-201ENST00000297615 G2E3Q7L622 706 aa17.03■□□□□ 0.32
TTC39B-201ENST00000297615 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
TTC39B-201ENST00000297615 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
TTC39B-201ENST00000297615 CPS1P31327 1500 aa17.03■□□□□ 0.32
TTC39B-201ENST00000297615 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.32
TTC39B-201ENST00000297615 OTUD7AQ8TE49 926 aaPredicted RBP17.02■□□□□ 0.32
TTC39B-201ENST00000297615 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
TTC39B-201ENST00000297615 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.31
TTC39B-201ENST00000297615 GNAI1P63096 354 aa17.02■□□□□ 0.31
TTC39B-201ENST00000297615 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.31
TTC39B-201ENST00000297615 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
TTC39B-201ENST00000297615 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
TTC39B-201ENST00000297615 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
TTC39B-201ENST00000297615 NSD2O96028 1365 aa17.01■□□□□ 0.31
TTC39B-201ENST00000297615 ZBTB40Q9NUA8 1239 aa17■□□□□ 0.31
TTC39B-201ENST00000297615 SHPRHQ149N8 1683 aa17■□□□□ 0.31
TTC39B-201ENST00000297615 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
TTC39B-201ENST00000297615 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
TTC39B-201ENST00000297615 EYA1Q99502 592 aa17■□□□□ 0.31
TTC39B-201ENST00000297615 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
TTC39B-201ENST00000297615 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
TTC39B-201ENST00000297615 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
TTC39B-201ENST00000297615 TPRNQ4KMQ1 711 aa16.99■□□□□ 0.31
TTC39B-201ENST00000297615 PUS7Q96PZ0 661 aaKnown RBP16.99■□□□□ 0.31
TTC39B-201ENST00000297615 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
TTC39B-201ENST00000297615 SIRT2Q8IXJ6 389 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 MEIS3Q99687 375 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 IQSEC2Q5JU85 1478 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 PSME1Q06323 249 aa16.97■□□□□ 0.31
TTC39B-201ENST00000297615 CFAP44Q96MT7 982 aa16.96■□□□□ 0.31
TTC39B-201ENST00000297615 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
TTC39B-201ENST00000297615 NINLQ9Y2I6 1382 aa16.96■□□□□ 0.31
TTC39B-201ENST00000297615 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
TTC39B-201ENST00000297615 DTNBO60941 627 aa16.95■□□□□ 0.3
TTC39B-201ENST00000297615 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
TTC39B-201ENST00000297615 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
TTC39B-201ENST00000297615 ZFYVE9O95405 1425 aa16.95■□□□□ 0.3
TTC39B-201ENST00000297615 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
TTC39B-201ENST00000297615 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
TTC39B-201ENST00000297615 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
TTC39B-201ENST00000297615 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
TTC39B-201ENST00000297615 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
TTC39B-201ENST00000297615 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
TTC39B-201ENST00000297615 FKBP5Q13451 457 aaPredicted RBP16.93■□□□□ 0.3
TTC39B-201ENST00000297615 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
TTC39B-201ENST00000297615 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
TTC39B-201ENST00000297615 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
TTC39B-201ENST00000297615 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
TTC39B-201ENST00000297615 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
TTC39B-201ENST00000297615 KCNQ3O43525 872 aa16.92■□□□□ 0.3
TTC39B-201ENST00000297615 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
TTC39B-201ENST00000297615 EDC4Q6P2E9 1401 aaKnown RBP16.91■□□□□ 0.3
TTC39B-201ENST00000297615 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
TTC39B-201ENST00000297615 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
TTC39B-201ENST00000297615 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
TTC39B-201ENST00000297615 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
TTC39B-201ENST00000297615 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
TTC39B-201ENST00000297615 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
TTC39B-201ENST00000297615 LGR6Q9HBX8 967 aa16.9■□□□□ 0.3
TTC39B-201ENST00000297615 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
TTC39B-201ENST00000297615 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
TTC39B-201ENST00000297615 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
TTC39B-201ENST00000297615 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
TTC39B-201ENST00000297615 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
TTC39B-201ENST00000297615 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
TTC39B-201ENST00000297615 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
TTC39B-201ENST00000297615 CALD1Q05682 793 aaKnown RBP16.87■□□□□ 0.29
TTC39B-201ENST00000297615 HSPA2P54652 639 aa16.87■□□□□ 0.29
TTC39B-201ENST00000297615 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
TTC39B-201ENST00000297615 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
TTC39B-201ENST00000297615 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
TTC39B-201ENST00000297615 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 NUCB1Q02818 461 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
TTC39B-201ENST00000297615 ALDH1L2Q3SY69 923 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 PHF8Q9UPP1 1060 aa16.86■□□□□ 0.29
TTC39B-201ENST00000297615 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
TTC39B-201ENST00000297615 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
TTC39B-201ENST00000297615 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms