RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 MAPK8IP3Q9UPT6 1336 aa31.54■■■□□ 2.64
SHISA5-201ENST00000296444 BCAR3O75815 825 aa31.53■■■□□ 2.64
SHISA5-201ENST00000296444 TSR2Q969E8 191 aaKnown RBP31.53■■■□□ 2.64
SHISA5-201ENST00000296444 C1orf167Q5SNV9 1468 aa31.52■■■□□ 2.64
SHISA5-201ENST00000296444 SULT6B1Q6IMI4 303 aa31.51■■■□□ 2.64
SHISA5-201ENST00000296444 LMOD2Q6P5Q4 547 aa31.51■■■□□ 2.63
SHISA5-201ENST00000296444 EXOC6Q8TAG9 804 aa31.51■■■□□ 2.63
SHISA5-201ENST00000296444 CCDC27Q2M243 656 aa31.5■■■□□ 2.63
SHISA5-201ENST00000296444 AMPHP49418 695 aa31.48■■■□□ 2.63
SHISA5-201ENST00000296444 ATF3P18847 181 aa31.47■■■□□ 2.63
SHISA5-201ENST00000296444 WDR63Q8IWG1 891 aa31.47■■■□□ 2.63
SHISA5-201ENST00000296444 NGEFQ8N5V2 710 aa31.46■■■□□ 2.63
SHISA5-201ENST00000296444 PPP4R2Q9NY27 417 aa31.46■■■□□ 2.63
SHISA5-201ENST00000296444 FANCIQ9NVI1 1328 aa31.46■■■□□ 2.63
SHISA5-201ENST00000296444 FAM83GA6ND36 823 aa31.46■■■□□ 2.63
SHISA5-201ENST00000296444 ZBTB7CA1YPR0 619 aa31.45■■■□□ 2.63
SHISA5-201ENST00000296444 KRT28Q7Z3Y7 464 aa31.45■■■□□ 2.63
SHISA5-201ENST00000296444 LTV1Q96GA3 475 aaPredicted RBP31.45■■■□□ 2.63
SHISA5-201ENST00000296444 MST1RQ04912 1400 aa31.45■■■□□ 2.62
SHISA5-201ENST00000296444 DCTN1Q14203 1278 aa31.44■■■□□ 2.62
SHISA5-201ENST00000296444 HOXC9P31274 260 aa31.43■■■□□ 2.62
SHISA5-201ENST00000296444 EYA1Q99502 592 aa31.42■■■□□ 2.62
SHISA5-201ENST00000296444 SBNO1A3KN83 1393 aa31.41■■■□□ 2.62
SHISA5-201ENST00000296444 NFE2L2Q16236 605 aa31.4■■■□□ 2.62
SHISA5-201ENST00000296444 BCL2L13Q9BXK5 485 aa31.4■■■□□ 2.62
SHISA5-201ENST00000296444 XIRP1Q702N8 1843 aaKnown RBP31.4■■■□□ 2.62
SHISA5-201ENST00000296444 FLT4P35916 1363 aa31.4■■■□□ 2.62
SHISA5-201ENST00000296444 CRBNQ96SW2 442 aa31.37■■■□□ 2.61
SHISA5-201ENST00000296444 USHBP1Q8N6Y0 703 aa31.37■■■□□ 2.61
SHISA5-201ENST00000296444 ERICH6BQ5W0A0 696 aa31.36■■■□□ 2.61
SHISA5-201ENST00000296444 LAS1LQ9Y4W2 734 aaKnown RBP31.36■■■□□ 2.61
SHISA5-201ENST00000296444 GCP02774 474 aa31.35■■■□□ 2.61
SHISA5-201ENST00000296444 PNNQ9H307 717 aaKnown RBP31.35■■■□□ 2.61
SHISA5-201ENST00000296444 TNNQ9UQP3 1299 aa31.35■■■□□ 2.61
SHISA5-201ENST00000296444 EXOSC9Q06265 439 aaKnown RBP31.34■■■□□ 2.61
SHISA5-201ENST00000296444 CABLES1Q8TDN4 633 aa31.33■■■□□ 2.61
SHISA5-201ENST00000296444 CADPS2Q86UW7 1296 aa31.32■■■□□ 2.6
SHISA5-201ENST00000296444 NFAT5O94916 1531 aa31.32■■■□□ 2.6
SHISA5-201ENST00000296444 RGPD1P0DJD0 1748 aa31.32■■■□□ 2.6
SHISA5-201ENST00000296444 MSH5O43196 834 aa31.31■■■□□ 2.6
SHISA5-201ENST00000296444 NCBP3Q53F19 620 aaKnown RBP31.31■■■□□ 2.6
SHISA5-201ENST00000296444 RARSP54136 660 aaKnown RBP31.31■■■□□ 2.6
SHISA5-201ENST00000296444 MSH6P52701 1360 aa31.3■■■□□ 2.6
SHISA5-201ENST00000296444 DLG5Q8TDM6 1919 aa31.29■■■□□ 2.6
SHISA5-201ENST00000296444 NEFMP07197 916 aa31.29■■■□□ 2.6
SHISA5-201ENST00000296444 AXIN2Q9Y2T1 843 aa31.29■■■□□ 2.6
SHISA5-201ENST00000296444 TRPM3Q9HCF6 1732 aaPredicted RBP31.29■■■□□ 2.6
SHISA5-201ENST00000296444 MCM10Q7L590 875 aa31.28■■■□□ 2.6
SHISA5-201ENST00000296444 LRRC59Q96AG4 307 aaKnown RBP31.28■■■□□ 2.6
SHISA5-201ENST00000296444 MYH16Q9H6N6 1097 aa31.28■■■□□ 2.6
SHISA5-201ENST00000296444 IGSF1Q8N6C5 1336 aa31.27■■■□□ 2.6
SHISA5-201ENST00000296444 USP54Q70EL1 1684 aa31.27■■■□□ 2.6
SHISA5-201ENST00000296444 ZC3H6P61129 1189 aaKnown RBP31.27■■■□□ 2.6
SHISA5-201ENST00000296444 MTHFSDQ2M296 383 aaKnown RBP31.27■■■□□ 2.6
SHISA5-201ENST00000296444 BRINP3Q76B58 766 aa31.27■■■□□ 2.6
SHISA5-201ENST00000296444 LTN1O94822 1766 aa31.26■■■□□ 2.6
SHISA5-201ENST00000296444 NBPF6Q5VWK0 638 aa31.25■■■□□ 2.59
SHISA5-201ENST00000296444 IP6K1Q92551 441 aa31.25■■■□□ 2.59
SHISA5-201ENST00000296444 NBPF4Q96M43 638 aa31.25■■■□□ 2.59
SHISA5-201ENST00000296444 FRAT1Q92837 279 aaPredicted RBP31.25■■■□□ 2.59
SHISA5-201ENST00000296444 CCDC136Q96JN2 1154 aa31.24■■■□□ 2.59
SHISA5-201ENST00000296444 ARHGEF25Q86VW2 580 aa31.24■■■□□ 2.59
SHISA5-201ENST00000296444 NCOA3Q9Y6Q9 1424 aa31.24■■■□□ 2.59
SHISA5-201ENST00000296444 DCCP43146 1447 aa31.23■■■□□ 2.59
SHISA5-201ENST00000296444 TSPYL6Q8N831 410 aa31.22■■■□□ 2.59
SHISA5-201ENST00000296444 SLAIN2Q9P270 581 aa31.22■■■□□ 2.59
SHISA5-201ENST00000296444 ELL2O00472 640 aaPredicted RBP31.22■■■□□ 2.59
SHISA5-201ENST00000296444 PANK1Q8TE04 598 aa31.22■■■□□ 2.59
SHISA5-201ENST00000296444 ARHGEF10O15013 1369 aa31.22■■■□□ 2.59
SHISA5-201ENST00000296444 KDRP35968 1356 aa31.2■■■□□ 2.59
SHISA5-201ENST00000296444 USP19O94966 1318 aa31.2■■■□□ 2.59
SHISA5-201ENST00000296444 KCNH5Q8NCM2 988 aa31.2■■■□□ 2.59
SHISA5-201ENST00000296444 MBIPQ9NS73 344 aa31.2■■■□□ 2.58
SHISA5-201ENST00000296444 IL16Q14005 1332 aa31.19■■■□□ 2.58
SHISA5-201ENST00000296444 MED1Q15648 1581 aaPredicted RBP31.19■■■□□ 2.58
SHISA5-201ENST00000296444 MIS18AQ9NYP9 233 aa31.19■■■□□ 2.58
SHISA5-201ENST00000296444 RLBP1P12271 317 aa31.18■■■□□ 2.58
SHISA5-201ENST00000296444 ZNF853P0CG23 659 aa31.17■■■□□ 2.58
SHISA5-201ENST00000296444 KRT24Q2M2I5 525 aa31.17■■■□□ 2.58
SHISA5-201ENST00000296444 ERICH6Q7L0X2 663 aa31.17■■■□□ 2.58
SHISA5-201ENST00000296444 SSH1Q8WYL5 1049 aa31.17■■■□□ 2.58
SHISA5-201ENST00000296444 KIF1AQ12756 1690 aa31.17■■■□□ 2.58
SHISA5-201ENST00000296444 TCERG1O14776 1098 aaKnown RBP31.16■■■□□ 2.58
SHISA5-201ENST00000296444 CLUAP1Q96AJ1 413 aa31.16■■■□□ 2.58
SHISA5-201ENST00000296444 RGPD2P0DJD1 1756 aa31.16■■■□□ 2.58
SHISA5-201ENST00000296444 NPHP3Q7Z494 1330 aa31.15■■■□□ 2.58
SHISA5-201ENST00000296444 ALS2Q96Q42 1657 aa31.15■■■□□ 2.58
SHISA5-201ENST00000296444 SKAP1Q86WV1 359 aa31.14■■■□□ 2.58
SHISA5-201ENST00000296444 SLIT3O75094 1523 aa31.14■■■□□ 2.58
SHISA5-201ENST00000296444 PXDNQ92626 1479 aa31.13■■■□□ 2.57
SHISA5-201ENST00000296444 CHRNA2Q15822 529 aa31.13■■■□□ 2.57
SHISA5-201ENST00000296444 C8orf58Q8NAV2 365 aa31.13■■■□□ 2.57
SHISA5-201ENST00000296444 KIF24Q5T7B8 1368 aa31.12■■■□□ 2.57
SHISA5-201ENST00000296444 COG6Q9Y2V7 657 aa31.12■■■□□ 2.57
SHISA5-201ENST00000296444 SPATA31A3Q5VYP0 1347 aa31.1■■■□□ 2.57
SHISA5-201ENST00000296444 CFAP44Q96MT7 982 aa31.1■■■□□ 2.57
SHISA5-201ENST00000296444 RTL1A6NKG5 1358 aa31.1■■■□□ 2.57
SHISA5-201ENST00000296444 ANKRD24Q8TF21 1146 aa31.09■■■□□ 2.57
SHISA5-201ENST00000296444 IFT57Q9NWB7 429 aa31.09■■■□□ 2.57
SHISA5-201ENST00000296444 CANXP27824 592 aaKnown RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms