RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 E9PSI1 815 aa29.98■■■□□ 2.39
PTX3-201ENST00000295927 TMPOP42166 694 aaKnown RBP29.98■■■□□ 2.39
PTX3-201ENST00000295927 AMPHP49418 695 aa29.96■■■□□ 2.39
PTX3-201ENST00000295927 RGPD1P0DJD0 1748 aa29.96■■■□□ 2.39
PTX3-201ENST00000295927 WDR63Q8IWG1 891 aa29.95■■■□□ 2.39
PTX3-201ENST00000295927 KIF24Q5T7B8 1368 aa29.95■■■□□ 2.38
PTX3-201ENST00000295927 LTN1O94822 1766 aa29.94■■■□□ 2.38
PTX3-201ENST00000295927 NFAT5O94916 1531 aa29.94■■■□□ 2.38
PTX3-201ENST00000295927 NEFMP07197 916 aa29.93■■■□□ 2.38
PTX3-201ENST00000295927 ALS2Q96Q42 1657 aa29.91■■■□□ 2.38
PTX3-201ENST00000295927 PHACTR3Q96KR7 559 aa29.91■■■□□ 2.38
PTX3-201ENST00000295927 TRIM35Q9UPQ4 493 aa29.9■■■□□ 2.38
PTX3-201ENST00000295927 HOXC9P31274 260 aa29.9■■■□□ 2.38
PTX3-201ENST00000295927 RIPK4P57078 832 aa29.9■■■□□ 2.38
PTX3-201ENST00000295927 KCNH5Q8NCM2 988 aa29.9■■■□□ 2.38
PTX3-201ENST00000295927 LMOD2Q6P5Q4 547 aa29.89■■■□□ 2.38
PTX3-201ENST00000295927 SLIT3O75094 1523 aa29.89■■■□□ 2.37
PTX3-201ENST00000295927 DDX17Q92841 729 aaKnown RBP29.88■■■□□ 2.37
PTX3-201ENST00000295927 SULT6B1Q6IMI4 303 aa29.88■■■□□ 2.37
PTX3-201ENST00000295927 NPHP3Q7Z494 1330 aa29.87■■■□□ 2.37
PTX3-201ENST00000295927 AEBP1Q8IUX7 1158 aa29.87■■■□□ 2.37
PTX3-201ENST00000295927 RTL1A6NKG5 1358 aa29.87■■■□□ 2.37
PTX3-201ENST00000295927 ERICH6BQ5W0A0 696 aa29.86■■■□□ 2.37
PTX3-201ENST00000295927 RRP1P56182 461 aaKnown RBP29.86■■■□□ 2.37
PTX3-201ENST00000295927 NFE2L2Q16236 605 aa29.86■■■□□ 2.37
PTX3-201ENST00000295927 ARHGEF10O15013 1369 aa29.85■■■□□ 2.37
PTX3-201ENST00000295927 USP19O94966 1318 aa29.85■■■□□ 2.37
PTX3-201ENST00000295927 PHRF1Q9P1Y6 1649 aaKnown RBP29.83■■■□□ 2.37
PTX3-201ENST00000295927 GCP02774 474 aa29.83■■■□□ 2.37
PTX3-201ENST00000295927 BRINP3Q76B58 766 aa29.83■■■□□ 2.37
PTX3-201ENST00000295927 DLG5Q8TDM6 1919 aa29.83■■■□□ 2.37
PTX3-201ENST00000295927 PXDNQ92626 1479 aa29.82■■■□□ 2.36
PTX3-201ENST00000295927 SLAIN2Q9P270 581 aa29.82■■■□□ 2.36
PTX3-201ENST00000295927 IP6K1Q92551 441 aa29.81■■■□□ 2.36
PTX3-201ENST00000295927 EYA1Q99502 592 aa29.81■■■□□ 2.36
PTX3-201ENST00000295927 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
PTX3-201ENST00000295927 IGSF1Q8N6C5 1336 aa29.8■■■□□ 2.36
PTX3-201ENST00000295927 MYH16Q9H6N6 1097 aa29.79■■■□□ 2.36
PTX3-201ENST00000295927 IL16Q14005 1332 aa29.78■■■□□ 2.36
PTX3-201ENST00000295927 MED1Q15648 1581 aaPredicted RBP29.78■■■□□ 2.36
PTX3-201ENST00000295927 KDRP35968 1356 aa29.77■■■□□ 2.36
PTX3-201ENST00000295927 TNS3Q68CZ2 1445 aa29.77■■■□□ 2.36
PTX3-201ENST00000295927 ARHGEF25Q86VW2 580 aa29.77■■■□□ 2.36
PTX3-201ENST00000295927 ZBTB7CA1YPR0 619 aa29.76■■■□□ 2.35
PTX3-201ENST00000295927 LTV1Q96GA3 475 aaPredicted RBP29.76■■■□□ 2.35
PTX3-201ENST00000295927 SPATA31A3Q5VYP0 1347 aa29.73■■■□□ 2.35
PTX3-201ENST00000295927 FANCIQ9NVI1 1328 aa29.71■■■□□ 2.35
PTX3-201ENST00000295927 PLIN1O60240 522 aa29.71■■■□□ 2.35
PTX3-201ENST00000295927 LMOD3Q0VAK6 560 aa29.71■■■□□ 2.35
PTX3-201ENST00000295927 TSR2Q969E8 191 aaKnown RBP29.71■■■□□ 2.35
PTX3-201ENST00000295927 PPP4R2Q9NY27 417 aa29.71■■■□□ 2.35
PTX3-201ENST00000295927 CRYBG1Q9Y4K1 1723 aa29.69■■■□□ 2.34
PTX3-201ENST00000295927 THUMPD2Q9BTF0 503 aaKnown RBP29.68■■■□□ 2.34
PTX3-201ENST00000295927 RGPD2P0DJD1 1756 aa29.68■■■□□ 2.34
PTX3-201ENST00000295927 CALD1Q05682 793 aaKnown RBP29.67■■■□□ 2.34
PTX3-201ENST00000295927 SOS2Q07890 1332 aaPredicted RBP29.67■■■□□ 2.34
PTX3-201ENST00000295927 RGPD5Q99666 1765 aa29.66■■■□□ 2.34
PTX3-201ENST00000295927 ZC3H6P61129 1189 aaKnown RBP29.65■■■□□ 2.34
PTX3-201ENST00000295927 LTBP4Q8N2S1 1624 aa29.65■■■□□ 2.34
PTX3-201ENST00000295927 FAM83GA6ND36 823 aa29.65■■■□□ 2.34
PTX3-201ENST00000295927 BCAR3O75815 825 aa29.65■■■□□ 2.34
PTX3-201ENST00000295927 NHSL1Q5SYE7 1610 aa29.64■■■□□ 2.34
PTX3-201ENST00000295927 CABLES1Q8TDN4 633 aa29.64■■■□□ 2.34
PTX3-201ENST00000295927 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.63■■■□□ 2.33
PTX3-201ENST00000295927 MTHFSDQ2M296 383 aaKnown RBP29.63■■■□□ 2.33
PTX3-201ENST00000295927 NBPF6Q5VWK0 638 aa29.63■■■□□ 2.33
PTX3-201ENST00000295927 USHBP1Q8N6Y0 703 aa29.63■■■□□ 2.33
PTX3-201ENST00000295927 NBPF4Q96M43 638 aa29.63■■■□□ 2.33
PTX3-201ENST00000295927 EXOSC9Q06265 439 aaKnown RBP29.62■■■□□ 2.33
PTX3-201ENST00000295927 AXIN2Q9Y2T1 843 aa29.62■■■□□ 2.33
PTX3-201ENST00000295927 DCTN1Q14203 1278 aa29.61■■■□□ 2.33
PTX3-201ENST00000295927 LAS1LQ9Y4W2 734 aaKnown RBP29.61■■■□□ 2.33
PTX3-201ENST00000295927 IFT57Q9NWB7 429 aa29.61■■■□□ 2.33
PTX3-201ENST00000295927 RARSP54136 660 aaKnown RBP29.6■■■□□ 2.33
PTX3-201ENST00000295927 ANKRD24Q8TF21 1146 aa29.6■■■□□ 2.33
PTX3-201ENST00000295927 GNAI1P63096 354 aa29.59■■■□□ 2.33
PTX3-201ENST00000295927 EXOC6Q8TAG9 804 aa29.59■■■□□ 2.33
PTX3-201ENST00000295927 COL18A1P39060 1754 aa29.59■■■□□ 2.33
PTX3-201ENST00000295927 CT47B1P0C2W7 299 aaPredicted RBP29.59■■■□□ 2.33
PTX3-201ENST00000295927 ZNF853P0CG23 659 aa29.59■■■□□ 2.33
PTX3-201ENST00000295927 GAS2L2Q8NHY3 880 aa29.59■■■□□ 2.33
PTX3-201ENST00000295927 LRRC59Q96AG4 307 aaKnown RBP29.59■■■□□ 2.33
PTX3-201ENST00000295927 C20orf194Q5TEA3 1177 aa29.57■■■□□ 2.32
PTX3-201ENST00000295927 CAMTA1Q9Y6Y1 1673 aa29.56■■■□□ 2.32
PTX3-201ENST00000295927 MCM10Q7L590 875 aa29.55■■■□□ 2.32
PTX3-201ENST00000295927 CFAP44Q96MT7 982 aa29.55■■■□□ 2.32
PTX3-201ENST00000295927 NCAPD2Q15021 1401 aa29.55■■■□□ 2.32
PTX3-201ENST00000295927 B4GALNT3Q6L9W6 998 aa29.55■■■□□ 2.32
PTX3-201ENST00000295927 CRBNQ96SW2 442 aa29.53■■■□□ 2.32
PTX3-201ENST00000295927 CPDO75976 1380 aa29.53■■■□□ 2.32
PTX3-201ENST00000295927 ERBB3P21860 1342 aa29.53■■■□□ 2.32
PTX3-201ENST00000295927 MBIPQ9NS73 344 aa29.53■■■□□ 2.32
PTX3-201ENST00000295927 ABCC6O95255 1503 aa29.53■■■□□ 2.32
PTX3-201ENST00000295927 ROBO1Q9Y6N7 1651 aa29.51■■■□□ 2.32
PTX3-201ENST00000295927 RTF1Q92541 710 aaKnown RBP29.51■■■□□ 2.32
PTX3-201ENST00000295927 KIAA0232Q92628 1395 aa29.51■■■□□ 2.31
PTX3-201ENST00000295927 ABCA3Q99758 1704 aa29.51■■■□□ 2.31
PTX3-201ENST00000295927 CHRNA2Q15822 529 aa29.49■■■□□ 2.31
PTX3-201ENST00000295927 BCL2L13Q9BXK5 485 aa29.49■■■□□ 2.31
PTX3-201ENST00000295927 LMO7Q8WWI1 1683 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms