RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
CCT3-201ENST00000295688 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
CCT3-201ENST00000295688 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
CCT3-201ENST00000295688 ANKRD45Q5TZF3 282 aa18.51■□□□□ 0.55
CCT3-201ENST00000295688 GBP4Q96PP9 640 aa18.51■□□□□ 0.55
CCT3-201ENST00000295688 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
CCT3-201ENST00000295688 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
CCT3-201ENST00000295688 KIF24Q5T7B8 1368 aa18.5■□□□□ 0.55
CCT3-201ENST00000295688 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
CCT3-201ENST00000295688 ABCC4O15439 1325 aa18.49■□□□□ 0.55
CCT3-201ENST00000295688 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
CCT3-201ENST00000295688 GZF1Q9H116 711 aaPredicted RBP18.48■□□□□ 0.55
CCT3-201ENST00000295688 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
CCT3-201ENST00000295688 CLCN1P35523 988 aa18.47■□□□□ 0.55
CCT3-201ENST00000295688 YEATS2Q9ULM3 1422 aa18.47■□□□□ 0.55
CCT3-201ENST00000295688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■□□□ 12.4
CCT3-201ENST00000295688 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
CCT3-201ENST00000295688 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
CCT3-201ENST00000295688 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
CCT3-201ENST00000295688 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
CCT3-201ENST00000295688 IL13P35225 146 aa18.45■□□□□ 0.54
CCT3-201ENST00000295688 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
CCT3-201ENST00000295688 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
CCT3-201ENST00000295688 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
CCT3-201ENST00000295688 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
CCT3-201ENST00000295688 TNPO1Q92973 898 aaKnown RBP18.45■□□□□ 0.54
CCT3-201ENST00000295688 K7ELQ4 463 aaPredicted RBP18.44■□□□□ 0.54
CCT3-201ENST00000295688 CDC45O75419 566 aa18.44■□□□□ 0.54
CCT3-201ENST00000295688 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
CCT3-201ENST00000295688 MBIPQ9NS73 344 aa18.44■□□□□ 0.54
CCT3-201ENST00000295688 HMOX1P09601 288 aa18.44■□□□□ 0.54
CCT3-201ENST00000295688 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
CCT3-201ENST00000295688 GRPEL1Q9HAV7 217 aa18.44■□□□□ 0.54
CCT3-201ENST00000295688 KIF2CQ99661 725 aa18.43■□□□□ 0.54
CCT3-201ENST00000295688 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
CCT3-201ENST00000295688 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
CCT3-201ENST00000295688 TSPYL6Q8N831 410 aa18.42■□□□□ 0.54
CCT3-201ENST00000295688 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
CCT3-201ENST00000295688 GOLGA6L22H0YM25 854 aa18.41■□□□□ 0.54
CCT3-201ENST00000295688 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
CCT3-201ENST00000295688 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
CCT3-201ENST00000295688 ARXQ96QS3 562 aa18.4■□□□□ 0.54
CCT3-201ENST00000295688 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
CCT3-201ENST00000295688 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
CCT3-201ENST00000295688 EMILIN1Q9Y6C2 1016 aa18.4■□□□□ 0.54
CCT3-201ENST00000295688 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
CCT3-201ENST00000295688 COG3Q96JB2 828 aa18.39■□□□□ 0.53
CCT3-201ENST00000295688 PANK2Q9BZ23 570 aa18.39■□□□□ 0.53
CCT3-201ENST00000295688 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.53
CCT3-201ENST00000295688 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 CLEC17AQ6ZS10 378 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 RABEP1Q15276 862 aa18.38■□□□□ 0.53
CCT3-201ENST00000295688 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
CCT3-201ENST00000295688 FBLN1P23142 703 aa18.37■□□□□ 0.53
CCT3-201ENST00000295688 INTS3Q68E01 1043 aaKnown RBP18.37■□□□□ 0.53
CCT3-201ENST00000295688 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
CCT3-201ENST00000295688 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
CCT3-201ENST00000295688 SIRT1Q96EB6 747 aa18.36■□□□□ 0.53
CCT3-201ENST00000295688 AGLP35573 1532 aa18.35■□□□□ 0.53
CCT3-201ENST00000295688 PLEKHM2Q8IWE5 1019 aa18.35■□□□□ 0.53
CCT3-201ENST00000295688 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
CCT3-201ENST00000295688 NME9Q86XW9 330 aa18.35■□□□□ 0.53
CCT3-201ENST00000295688 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCT3-201ENST00000295688 SPATA31D1Q6ZQQ2 1576 aa18.35■□□□□ 0.53
CCT3-201ENST00000295688 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
CCT3-201ENST00000295688 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
CCT3-201ENST00000295688 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
CCT3-201ENST00000295688 CCDC61Q9Y6R9 512 aa18.33■□□□□ 0.52
CCT3-201ENST00000295688 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
CCT3-201ENST00000295688 NUCB2P80303 420 aa18.32■□□□□ 0.52
CCT3-201ENST00000295688 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
CCT3-201ENST00000295688 TRIM44Q96DX7 344 aaPredicted RBP18.32■□□□□ 0.52
CCT3-201ENST00000295688 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
CCT3-201ENST00000295688 GSPT1P15170 499 aaKnown RBP18.32■□□□□ 0.52
CCT3-201ENST00000295688 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
CCT3-201ENST00000295688 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
CCT3-201ENST00000295688 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
CCT3-201ENST00000295688 ITSN1Q15811 1721 aa18.31■□□□□ 0.52
CCT3-201ENST00000295688 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
CCT3-201ENST00000295688 PTPRCP08575 1304 aa18.31■□□□□ 0.52
CCT3-201ENST00000295688 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
CCT3-201ENST00000295688 C3P01024 1663 aa18.3■□□□□ 0.52
CCT3-201ENST00000295688 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
CCT3-201ENST00000295688 ESPNB1AK53 854 aa18.3■□□□□ 0.52
CCT3-201ENST00000295688 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
CCT3-201ENST00000295688 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
CCT3-201ENST00000295688 CWC22Q9HCG8 908 aaKnown RBP18.3■□□□□ 0.52
CCT3-201ENST00000295688 SSFA2P28290 1259 aa18.29■□□□□ 0.52
CCT3-201ENST00000295688 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
CCT3-201ENST00000295688 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
CCT3-201ENST00000295688 CPS1P31327 1500 aa18.29■□□□□ 0.52
CCT3-201ENST00000295688 BAG4O95429 457 aaKnown RBP18.28■□□□□ 0.52
CCT3-201ENST00000295688 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
CCT3-201ENST00000295688 CHL1O00533 1208 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms