RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 UPF2Q9HAU5 1272 aaKnown RBP20.02■□□□□ 0.8
NCKIPSD-201ENST00000294129 VAMP4O75379 141 aa20.02■□□□□ 0.8
NCKIPSD-201ENST00000294129 NFKBIBQ15653 356 aa20.02■□□□□ 0.8
NCKIPSD-201ENST00000294129 ZNF692Q9BU19 519 aaPredicted RBP20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 GNAI1P63096 354 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 ZBTB40Q9NUA8 1239 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 LNPKQ9C0E8 428 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 TTC21BQ7Z4L5 1316 aa20.01■□□□□ 0.79
NCKIPSD-201ENST00000294129 HSP90AB2PQ58FF8 381 aa20■□□□□ 0.79
NCKIPSD-201ENST00000294129 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
NCKIPSD-201ENST00000294129 EID1Q9Y6B2 187 aa20■□□□□ 0.79
NCKIPSD-201ENST00000294129 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
NCKIPSD-201ENST00000294129 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
NCKIPSD-201ENST00000294129 ALDH1L2Q3SY69 923 aa20■□□□□ 0.79
NCKIPSD-201ENST00000294129 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
NCKIPSD-201ENST00000294129 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
NCKIPSD-201ENST00000294129 MFAP1P55081 439 aaKnown RBP19.99■□□□□ 0.79
NCKIPSD-201ENST00000294129 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
NCKIPSD-201ENST00000294129 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
NCKIPSD-201ENST00000294129 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
NCKIPSD-201ENST00000294129 MCM10Q7L590 875 aa19.98■□□□□ 0.79
NCKIPSD-201ENST00000294129 HDAC1Q13547 482 aaPredicted RBP19.98■□□□□ 0.79
NCKIPSD-201ENST00000294129 UBR1Q8IWV7 1749 aa19.98■□□□□ 0.79
NCKIPSD-201ENST00000294129 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
NCKIPSD-201ENST00000294129 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
NCKIPSD-201ENST00000294129 SPRYD3Q8NCJ5 442 aa19.97■□□□□ 0.79
NCKIPSD-201ENST00000294129 AATKQ6ZMQ8 1374 aa19.97■□□□□ 0.79
NCKIPSD-201ENST00000294129 TECPR2O15040 1411 aa19.97■□□□□ 0.79
NCKIPSD-201ENST00000294129 ITSN1Q15811 1721 aa19.96■□□□□ 0.79
NCKIPSD-201ENST00000294129 NUTM2GQ5VZR2 741 aa19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 NGDNQ8NEJ9 315 aaKnown RBP19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 SIRT1Q96EB6 747 aa19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
NCKIPSD-201ENST00000294129 FRAT2O75474 233 aaPredicted RBP19.94■□□□□ 0.78
NCKIPSD-201ENST00000294129 MON2Q7Z3U7 1717 aa19.94■□□□□ 0.78
NCKIPSD-201ENST00000294129 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.94■□□□□ 0.78
NCKIPSD-201ENST00000294129 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
NCKIPSD-201ENST00000294129 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
NCKIPSD-201ENST00000294129 BECN1Q14457 450 aa19.93■□□□□ 0.78
NCKIPSD-201ENST00000294129 ANKRD45Q5TZF3 282 aa19.93■□□□□ 0.78
NCKIPSD-201ENST00000294129 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
NCKIPSD-201ENST00000294129 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
NCKIPSD-201ENST00000294129 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
NCKIPSD-201ENST00000294129 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
NCKIPSD-201ENST00000294129 TBC1D32Q96NH3 1257 aa19.92■□□□□ 0.78
NCKIPSD-201ENST00000294129 KNDC1Q76NI1 1749 aa19.92■□□□□ 0.78
NCKIPSD-201ENST00000294129 ZBTB7BO15156 539 aaPredicted RBP19.91■□□□□ 0.78
NCKIPSD-201ENST00000294129 C3P01024 1663 aa19.91■□□□□ 0.78
NCKIPSD-201ENST00000294129 FOXO3O43524 673 aa19.91■□□□□ 0.78
NCKIPSD-201ENST00000294129 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
NCKIPSD-201ENST00000294129 AKAP12Q02952 1782 aa19.9■□□□□ 0.78
NCKIPSD-201ENST00000294129 ZNF428Q96B54 188 aa19.89■□□□□ 0.78
NCKIPSD-201ENST00000294129 USP6P35125 1406 aa19.89■□□□□ 0.78
NCKIPSD-201ENST00000294129 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
NCKIPSD-201ENST00000294129 C14orf37Q86TY3 774 aa19.89■□□□□ 0.77
NCKIPSD-201ENST00000294129 PLEKHG3A1L390 1219 aa19.89■□□□□ 0.77
NCKIPSD-201ENST00000294129 CHD1LQ86WJ1 897 aa19.89■□□□□ 0.77
NCKIPSD-201ENST00000294129 IL27Q8NEV9 243 aa19.89■□□□□ 0.77
NCKIPSD-201ENST00000294129 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-201ENST00000294129 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
NCKIPSD-201ENST00000294129 AMPHP49418 695 aa19.88■□□□□ 0.77
NCKIPSD-201ENST00000294129 NUCB1Q02818 461 aa19.88■□□□□ 0.77
NCKIPSD-201ENST00000294129 C22orf23Q9BZE7 217 aa19.87■□□□□ 0.77
NCKIPSD-201ENST00000294129 LTV1Q96GA3 475 aaPredicted RBP19.86■□□□□ 0.77
NCKIPSD-201ENST00000294129 TBC1D2Q9BYX2 928 aa19.86■□□□□ 0.77
NCKIPSD-201ENST00000294129 OVOS2A0A0J9YW53 1432 aa19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 OVOS2Q6IE36 1432 aa19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 RTN4Q9NQC3 1192 aaKnown RBP19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 APBB1O00213 710 aa19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 NLRP6P59044 892 aa19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
NCKIPSD-201ENST00000294129 ARHGAP45Q92619 1136 aa19.84■□□□□ 0.77
NCKIPSD-201ENST00000294129 BRPF1P55201 1214 aaPredicted RBP19.84■□□□□ 0.77
NCKIPSD-201ENST00000294129 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
NCKIPSD-201ENST00000294129 KCNA6P17658 529 aa19.83■□□□□ 0.77
NCKIPSD-201ENST00000294129 ABCC4O15439 1325 aa19.83■□□□□ 0.77
NCKIPSD-201ENST00000294129 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
NCKIPSD-201ENST00000294129 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
NCKIPSD-201ENST00000294129 RTF1Q92541 710 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-201ENST00000294129 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-201ENST00000294129 RGPD8O14715 1765 aaPredicted RBP19.81■□□□□ 0.76
NCKIPSD-201ENST00000294129 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
NCKIPSD-201ENST00000294129 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
NCKIPSD-201ENST00000294129 PEAK1Q9H792 1746 aa19.81■□□□□ 0.76
NCKIPSD-201ENST00000294129 GSE1Q14687 1217 aa19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 NECTIN2Q92692 538 aa19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 CHMP4BQ9H444 224 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 TSPYL4Q9UJ04 414 aa19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 CHL1O00533 1208 aa19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 SLC4A10Q6U841 1118 aa19.8■□□□□ 0.76
NCKIPSD-201ENST00000294129 EYA1Q99502 592 aa19.79■□□□□ 0.76
NCKIPSD-201ENST00000294129 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
NCKIPSD-201ENST00000294129 GCC1Q96CN9 775 aa19.78■□□□□ 0.76
NCKIPSD-201ENST00000294129 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
NCKIPSD-201ENST00000294129 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms