RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
SEC16A-202ENST00000290037 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
SEC16A-202ENST00000290037 SMTNL1A8MU46 457 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 RTEL1-TNFRSF6BF6WH68 1400 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 SOX12O15370 315 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 MAGEC2Q9UBF1 373 aaPredicted RBP17.54■□□□□ 0.4
SEC16A-202ENST00000290037 PTPRCP08575 1304 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 FAM107BQ9H098 131 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SEC16A-202ENST00000290037 LRRCC1Q9C099 1032 aa17.53■□□□□ 0.4
SEC16A-202ENST00000290037 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
SEC16A-202ENST00000290037 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
SEC16A-202ENST00000290037 DESP17661 470 aa17.53■□□□□ 0.4
SEC16A-202ENST00000290037 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
SEC16A-202ENST00000290037 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
SEC16A-202ENST00000290037 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
SEC16A-202ENST00000290037 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
SEC16A-202ENST00000290037 TPRNQ4KMQ1 711 aa17.52■□□□□ 0.4
SEC16A-202ENST00000290037 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
SEC16A-202ENST00000290037 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
SEC16A-202ENST00000290037 K7ELQ4 463 aaPredicted RBP17.52■□□□□ 0.4
SEC16A-202ENST00000290037 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
SEC16A-202ENST00000290037 SMC2O95347 1197 aa17.52■□□□□ 0.39
SEC16A-202ENST00000290037 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
SEC16A-202ENST00000290037 GOLGA6L9A6NEM1 432 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 DNMT1P26358 1616 aaKnown RBP17.51■□□□□ 0.39
SEC16A-202ENST00000290037 TRIM21P19474 475 aaKnown RBP17.51■□□□□ 0.39
SEC16A-202ENST00000290037 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 NOL7Q9UMY1 257 aaKnown RBP17.51■□□□□ 0.39
SEC16A-202ENST00000290037 GOLGA6L10A6NI86 522 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 PES1O00541 588 aaKnown RBP17.51■□□□□ 0.39
SEC16A-202ENST00000290037 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 ZMYM3Q14202 1370 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 NFKBIBQ15653 356 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 RIC3Q7Z5B4 369 aa17.51■□□□□ 0.39
SEC16A-202ENST00000290037 CCDC196A0A1B0GTZ2 297 aa17.5■□□□□ 0.39
SEC16A-202ENST00000290037 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
SEC16A-202ENST00000290037 TRAK2O60296 914 aa17.5■□□□□ 0.39
SEC16A-202ENST00000290037 ZNF771Q7L3S4 317 aaPredicted RBP17.5■□□□□ 0.39
SEC16A-202ENST00000290037 RRP9O43818 475 aaKnown RBP17.49■□□□□ 0.39
SEC16A-202ENST00000290037 APPP05067 770 aa17.49■□□□□ 0.39
SEC16A-202ENST00000290037 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
SEC16A-202ENST00000290037 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
SEC16A-202ENST00000290037 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
SEC16A-202ENST00000290037 ODF2Q5BJF6 829 aa17.49■□□□□ 0.39
SEC16A-202ENST00000290037 PCMTD1Q96MG8 357 aaPredicted RBP17.49■□□□□ 0.39
SEC16A-202ENST00000290037 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
SEC16A-202ENST00000290037 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
SEC16A-202ENST00000290037 FGFR1OPO95684 399 aaKnown RBP17.48■□□□□ 0.39
SEC16A-202ENST00000290037 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
SEC16A-202ENST00000290037 CCDC57Q2TAC2 916 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 LEKR1Q6ZMV7 388 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 CEP57L1Q8IYX8 460 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 MTHFSP49914 203 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 OFD1O75665 1012 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
SEC16A-202ENST00000290037 MAP9Q49MG5 647 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
SEC16A-202ENST00000290037 POLR3GO15318 223 aaPredicted RBP17.47■□□□□ 0.39
SEC16A-202ENST00000290037 CCAR1Q8IX12 1150 aaKnown RBP17.47■□□□□ 0.39
SEC16A-202ENST00000290037 DHX37Q8IY37 1157 aaKnown RBP17.47■□□□□ 0.39
SEC16A-202ENST00000290037 DDX12PQ92771 950 aa17.47■□□□□ 0.39
SEC16A-202ENST00000290037 KIF20AO95235 890 aa17.46■□□□□ 0.39
SEC16A-202ENST00000290037 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
SEC16A-202ENST00000290037 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
SEC16A-202ENST00000290037 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
SEC16A-202ENST00000290037 CT47A1Q5JQC4 288 aaPredicted RBP17.46■□□□□ 0.39
SEC16A-202ENST00000290037 VPS53Q5VIR6 699 aa17.46■□□□□ 0.38
SEC16A-202ENST00000290037 KAT6BQ8WYB5 2073 aa17.45■□□□□ 0.38
SEC16A-202ENST00000290037 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
SEC16A-202ENST00000290037 TATP17735 454 aaPredicted RBP17.45■□□□□ 0.38
SEC16A-202ENST00000290037 ARHGAP45Q92619 1136 aa17.45■□□□□ 0.38
SEC16A-202ENST00000290037 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
SEC16A-202ENST00000290037 RRP7AQ9Y3A4 280 aaKnown RBP17.44■□□□□ 0.38
SEC16A-202ENST00000290037 KDM5AP29375 1690 aaKnown RBP17.44■□□□□ 0.38
SEC16A-202ENST00000290037 HSP90AB3PQ58FF7 597 aa17.44■□□□□ 0.38
SEC16A-202ENST00000290037 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
SEC16A-202ENST00000290037 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
SEC16A-202ENST00000290037 TRIM5Q9C035 493 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 DEF6Q9H4E7 631 aa17.43■□□□□ 0.38
SEC16A-202ENST00000290037 BMP2KQ9NSY1 1161 aaPredicted RBP17.43■□□□□ 0.38
SEC16A-202ENST00000290037 ABCC5O15440 1437 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
SEC16A-202ENST00000290037 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 KIF1BO60333 1816 aa17.42■□□□□ 0.38
SEC16A-202ENST00000290037 ZSCAN12O43309 604 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms