RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 HSP90AB2PQ58FF8 381 aa24.53■■□□□ 1.52
VBP1-201ENST00000286428 PIK3C2AO00443 1686 aa24.52■■□□□ 1.52
VBP1-201ENST00000286428 SOX12O15370 315 aa24.51■■□□□ 1.51
VBP1-201ENST00000286428 PDE3AQ14432 1141 aa24.51■■□□□ 1.51
VBP1-201ENST00000286428 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
VBP1-201ENST00000286428 KDM4FA0A1W2PPD8 638 aa24.5■■□□□ 1.51
VBP1-201ENST00000286428 SULT6B1Q6IMI4 303 aa24.5■■□□□ 1.51
VBP1-201ENST00000286428 CANXP27824 592 aaKnown RBP24.5■■□□□ 1.51
VBP1-201ENST00000286428 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
VBP1-201ENST00000286428 PHACTR3Q96KR7 559 aa24.5■■□□□ 1.51
VBP1-201ENST00000286428 RTL1A6NKG5 1358 aa24.49■■□□□ 1.51
VBP1-201ENST00000286428 RARSP54136 660 aaKnown RBP24.49■■□□□ 1.51
VBP1-201ENST00000286428 FANCIQ9NVI1 1328 aa24.49■■□□□ 1.51
VBP1-201ENST00000286428 ZNF428Q96B54 188 aa24.48■■□□□ 1.51
VBP1-201ENST00000286428 CRBNQ96SW2 442 aa24.48■■□□□ 1.51
VBP1-201ENST00000286428 MS4A1P11836 297 aa24.47■■□□□ 1.51
VBP1-201ENST00000286428 GNAI1P63096 354 aa24.47■■□□□ 1.51
VBP1-201ENST00000286428 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
VBP1-201ENST00000286428 BCAR3O75815 825 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 HSPA2P54652 639 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 AAMPQ13685 434 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 IFT57Q9NWB7 429 aa24.46■■□□□ 1.51
VBP1-201ENST00000286428 FOXO3O43524 673 aa24.45■■□□□ 1.5
VBP1-201ENST00000286428 KIF1AQ12756 1690 aa24.45■■□□□ 1.5
VBP1-201ENST00000286428 HOXC9P31274 260 aa24.44■■□□□ 1.5
VBP1-201ENST00000286428 NUTM2GQ5VZR2 741 aa24.43■■□□□ 1.5
VBP1-201ENST00000286428 MSH6P52701 1360 aa24.43■■□□□ 1.5
VBP1-201ENST00000286428 PEAK1Q9H792 1746 aa24.42■■□□□ 1.5
VBP1-201ENST00000286428 KRT28Q7Z3Y7 464 aa24.42■■□□□ 1.5
VBP1-201ENST00000286428 LMTK3Q96Q04 1460 aa24.42■■□□□ 1.5
VBP1-201ENST00000286428 IGSF1Q8N6C5 1336 aa24.41■■□□□ 1.5
VBP1-201ENST00000286428 EXOSC9Q06265 439 aaKnown RBP24.41■■□□□ 1.5
VBP1-201ENST00000286428 KDRP35968 1356 aa24.41■■□□□ 1.5
VBP1-201ENST00000286428 C20orf194Q5TEA3 1177 aa24.4■■□□□ 1.5
VBP1-201ENST00000286428 IP6K1Q92551 441 aa24.4■■□□□ 1.5
VBP1-201ENST00000286428 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
VBP1-201ENST00000286428 HAP1P54257 671 aaPredicted RBP24.4■■□□□ 1.5
VBP1-201ENST00000286428 GAS2L2Q8NHY3 880 aa24.4■■□□□ 1.5
VBP1-201ENST00000286428 CFAP44Q96MT7 982 aa24.4■■□□□ 1.5
VBP1-201ENST00000286428 RGPD1P0DJD0 1748 aa24.38■■□□□ 1.49
VBP1-201ENST00000286428 ALDH1L2Q3SY69 923 aa24.38■■□□□ 1.49
VBP1-201ENST00000286428 AEBP1Q8IUX7 1158 aa24.38■■□□□ 1.49
VBP1-201ENST00000286428 EYA1Q99502 592 aa24.38■■□□□ 1.49
VBP1-201ENST00000286428 MST1RQ04912 1400 aa24.38■■□□□ 1.49
VBP1-201ENST00000286428 ZNF853P0CG23 659 aa24.37■■□□□ 1.49
VBP1-201ENST00000286428 FRAT1Q92837 279 aaPredicted RBP24.37■■□□□ 1.49
VBP1-201ENST00000286428 TSHZ2Q9NRE2 1034 aa24.37■■□□□ 1.49
VBP1-201ENST00000286428 LAS1LQ9Y4W2 734 aaKnown RBP24.37■■□□□ 1.49
VBP1-201ENST00000286428 HTATSF1O43719 755 aaKnown RBP24.36■■□□□ 1.49
VBP1-201ENST00000286428 RTF1Q92541 710 aaKnown RBP24.36■■□□□ 1.49
VBP1-201ENST00000286428 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
VBP1-201ENST00000286428 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
VBP1-201ENST00000286428 GCP02774 474 aa24.35■■□□□ 1.49
VBP1-201ENST00000286428 ZKSCAN2Q63HK3 967 aa24.35■■□□□ 1.49
VBP1-201ENST00000286428 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
VBP1-201ENST00000286428 MARF1Q9Y4F3 1742 aaKnown RBP24.33■■□□□ 1.49
VBP1-201ENST00000286428 KIF16BQ96L93 1317 aa24.33■■□□□ 1.49
VBP1-201ENST00000286428 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
VBP1-201ENST00000286428 USP19O94966 1318 aa24.33■■□□□ 1.48
VBP1-201ENST00000286428 NFAT5O94916 1531 aa24.32■■□□□ 1.48
VBP1-201ENST00000286428 BRPF1P55201 1214 aaPredicted RBP24.31■■□□□ 1.48
VBP1-201ENST00000286428 SLIT3O75094 1523 aa24.31■■□□□ 1.48
VBP1-201ENST00000286428 CENPQQ7L2Z9 268 aaPredicted RBP24.3■■□□□ 1.48
VBP1-201ENST00000286428 ARHGEF25Q86VW2 580 aa24.3■■□□□ 1.48
VBP1-201ENST00000286428 XPCQ01831 940 aaPredicted RBP24.29■■□□□ 1.48
VBP1-201ENST00000286428 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
VBP1-201ENST00000286428 MBIPQ9NS73 344 aa24.29■■□□□ 1.48
VBP1-201ENST00000286428 STRCP1A6NGW2 1772 aa24.29■■□□□ 1.48
VBP1-201ENST00000286428 SSH1Q8WYL5 1049 aa24.28■■□□□ 1.48
VBP1-201ENST00000286428 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
VBP1-201ENST00000286428 THUMPD2Q9BTF0 503 aaKnown RBP24.27■■□□□ 1.48
VBP1-201ENST00000286428 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
VBP1-201ENST00000286428 DZIP1LQ8IYY4 767 aaKnown RBP24.27■■□□□ 1.48
VBP1-201ENST00000286428 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
VBP1-201ENST00000286428 BCL2L13Q9BXK5 485 aa24.27■■□□□ 1.48
VBP1-201ENST00000286428 TRPM3Q9HCF6 1732 aaPredicted RBP24.26■■□□□ 1.47
VBP1-201ENST00000286428 FAM83GA6ND36 823 aa24.26■■□□□ 1.47
VBP1-201ENST00000286428 VAMP4O75379 141 aa24.26■■□□□ 1.47
VBP1-201ENST00000286428 STRCQ7RTU9 1775 aa24.25■■□□□ 1.47
VBP1-201ENST00000286428 CHL1O00533 1208 aa24.25■■□□□ 1.47
VBP1-201ENST00000286428 ATF7IPQ6VMQ6 1270 aa24.25■■□□□ 1.47
VBP1-201ENST00000286428 CLUAP1Q96AJ1 413 aa24.25■■□□□ 1.47
VBP1-201ENST00000286428 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
VBP1-201ENST00000286428 PANK1Q8TE04 598 aa24.24■■□□□ 1.47
VBP1-201ENST00000286428 CHMP4BQ9H444 224 aaKnown RBP24.24■■□□□ 1.47
VBP1-201ENST00000286428 GNAT3A8MTJ3 354 aa24.24■■□□□ 1.47
VBP1-201ENST00000286428 TWISTNBQ3B726 338 aaPredicted RBP24.24■■□□□ 1.47
VBP1-201ENST00000286428 ARHGAP45Q92619 1136 aa24.24■■□□□ 1.47
VBP1-201ENST00000286428 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
VBP1-201ENST00000286428 DCTN1Q14203 1278 aa24.23■■□□□ 1.47
VBP1-201ENST00000286428 BABAM1Q9NWV8 329 aa24.23■■□□□ 1.47
VBP1-201ENST00000286428 LTN1O94822 1766 aa24.23■■□□□ 1.47
VBP1-201ENST00000286428 ZBTB7CA1YPR0 619 aa24.22■■□□□ 1.47
VBP1-201ENST00000286428 DLG5Q8TDM6 1919 aa24.22■■□□□ 1.47
VBP1-201ENST00000286428 KIAA0232Q92628 1395 aa24.22■■□□□ 1.47
VBP1-201ENST00000286428 MVPQ14764 893 aaKnown RBP24.21■■□□□ 1.47
VBP1-201ENST00000286428 MCM10Q7L590 875 aa24.21■■□□□ 1.47
VBP1-201ENST00000286428 NOB1Q9ULX3 412 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms