RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MTMR3Q13615 1198 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 CC2D2BQ6DHV5 1058 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 TXNDC2Q86VQ3 553 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 NPAS4Q8IUM7 802 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 TMEM88BA6NKF7 163 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 SWI5Q1ZZU3 235 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 CKAP2LQ8IYA6 745 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 GGT7Q9UJ14 662 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 PLEKHD1A6NEE1 506 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 PTPROQ16827 1216 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 METTL14Q9HCE5 456 aaKnown RBP3.66□□□□□ -1.82
CHD1-201ENST00000284049 LDHBP07195 334 aaKnown RBP3.66□□□□□ -1.82
CHD1-201ENST00000284049 EML3Q32P44 896 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 TMUB1Q9BVT8 246 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 KMT5BQ4FZB7 885 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 MRFAP1L1Q96HT8 127 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 NPDC1Q9NQX5 325 aaPredicted RBP3.66□□□□□ -1.82
CHD1-201ENST00000284049 DNAAF2Q9NVR5 837 aaKnown RBP3.66□□□□□ -1.82
CHD1-201ENST00000284049 PRSS12P56730 875 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 CNGB1Q14028 1251 aaPredicted RBP3.65□□□□□ -1.82
CHD1-201ENST00000284049 NEUROD4Q9HD90 331 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 WIZO95785 1651 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 LGR5O75473 907 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 SSFA2P28290 1259 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 ZBTB33Q86T24 672 aa3.65□□□□□ -1.82
CHD1-201ENST00000284049 GTF3C2Q8WUA4 911 aaPredicted RBP3.65□□□□□ -1.82
CHD1-201ENST00000284049 SOCS7O14512 581 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 PDE3BQ13370 1112 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 CLP1Q92989 425 aaKnown RBP3.65□□□□□ -1.83
CHD1-201ENST00000284049 SEPT3Q9UH03 358 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 MAGEB6P1A0A0J9YX57 407 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 CPLX3Q8WVH0 158 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 TPD52L2O43399 206 aaKnown RBP3.65□□□□□ -1.83
CHD1-201ENST00000284049 TAGLNQ01995 201 aaKnown RBP3.65□□□□□ -1.83
CHD1-201ENST00000284049 NR6A1Q15406 480 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 MORC4Q8TE76 937 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 PPME1Q9Y570 386 aa3.65□□□□□ -1.83
CHD1-201ENST00000284049 USP17L15C9J2P7 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L10C9JJH3 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L13C9JLJ4 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L12C9JPN9 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L11C9JVI0 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L21D6R901 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L18D6R9N7 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L22D6RA61 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L17D6RBQ6 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L19D6RCP7 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L20D6RJB6 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 RECKO95980 971 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 PCSK2P16519 638 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 USP17L24Q0WX57 530 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 ENOX2Q16206 610 aaKnown RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 DZIP3Q86Y13 1208 aaKnown RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 AXDND1Q5T1B0 1012 aaPredicted RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 ASB16Q96NS5 453 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 TRIM55Q9BYV6 548 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 FBXO45P0C2W1 286 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 CADPSQ9ULU8 1353 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 CUX2O14529 1486 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 C21orf2O43822 256 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 GTF2IP78347 998 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 TOP2BQ02880 1626 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 HOXA2O43364 376 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 RAB15P59190 212 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 TUSC1Q2TAM9 212 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 CRTC2Q53ET0 693 aaPredicted RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 ALKBH2Q6NS38 261 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 PAF1Q8N7H5 531 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 PTCD2Q8WV60 388 aaKnown RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 PIK3R5Q8WYR1 880 aa3.64□□□□□ -1.83
CHD1-201ENST00000284049 G3BP2Q9UN86 482 aaKnown RBP3.64□□□□□ -1.83
CHD1-201ENST00000284049 PIK3CDO00329 1044 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 SH3BP5O60239 455 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 ICMTO60725 284 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 SRPK2P78362 688 aaKnown RBP3.63□□□□□ -1.83
CHD1-201ENST00000284049 GUCA2AQ02747 115 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 JPH4Q96JJ6 628 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 CARD14Q9BXL6 1004 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 FERMT3Q86UX7 667 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 RGL4Q8IZJ4 473 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 DUSP9Q99956 384 aaKnown RBP3.63□□□□□ -1.83
CHD1-201ENST00000284049 KAT6BQ8WYB5 2073 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 CNGA1P29973 690 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 SAFB2Q14151 953 aaKnown RBP eCLIP3.63□□□□□ -1.83
CHD1-201ENST00000284049 CCDC144BQ3MJ40 725 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 CCDC102BQ68D86 513 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 PPP4R4Q6NUP7 873 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NUDT18Q6ZVK8 323 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 FAM161BQ96MY7 647 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.63□□□□□ -1.831e-6■■■□□ 18.5
CHD1-201ENST00000284049 TCEAL9Q9UHQ7 104 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 TRPC6Q9Y210 931 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 CHMP3Q9Y3E7 222 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 FAM13AO94988 1023 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NFE2L2Q16236 605 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 SDE2Q6IQ49 451 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 PLIN1O60240 522 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NBPF14Q5TI25 921 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 CCDC181Q5TID7 509 aa3.63□□□□□ -1.83
CHD1-201ENST00000284049 NLRP2Q9NX02 1062 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms