RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 SOX12O15370 315 aa25.54■■□□□ 1.68
C11orf49-201ENST00000278460 PRKAR2BP31323 418 aa25.54■■□□□ 1.68
C11orf49-201ENST00000278460 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
C11orf49-201ENST00000278460 NEFMP07197 916 aa25.53■■□□□ 1.68
C11orf49-201ENST00000278460 NUTM2GQ5VZR2 741 aa25.53■■□□□ 1.68
C11orf49-201ENST00000278460 SPINK5Q9NQ38 1064 aaPredicted RBP25.53■■□□□ 1.68
C11orf49-201ENST00000278460 SLIT3O75094 1523 aa25.53■■□□□ 1.68
C11orf49-201ENST00000278460 HSP90AB2PQ58FF8 381 aa25.52■■□□□ 1.68
C11orf49-201ENST00000278460 DMRT2Q9Y5R5 561 aa25.52■■□□□ 1.68
C11orf49-201ENST00000278460 KRT28Q7Z3Y7 464 aa25.52■■□□□ 1.68
C11orf49-201ENST00000278460 RTL1A6NKG5 1358 aa25.51■■□□□ 1.67
C11orf49-201ENST00000278460 HMOX1P09601 288 aa25.51■■□□□ 1.67
C11orf49-201ENST00000278460 IRX6P78412 446 aaPredicted RBP25.51■■□□□ 1.67
C11orf49-201ENST00000278460 AMPHP49418 695 aa25.5■■□□□ 1.67
C11orf49-201ENST00000278460 ARHGEF10O15013 1369 aa25.49■■□□□ 1.67
C11orf49-201ENST00000278460 KCNH5Q8NCM2 988 aa25.48■■□□□ 1.67
C11orf49-201ENST00000278460 RRP1P56182 461 aaKnown RBP25.48■■□□□ 1.67
C11orf49-201ENST00000278460 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
C11orf49-201ENST00000278460 RIPK4P57078 832 aa25.46■■□□□ 1.67
C11orf49-201ENST00000278460 XPCQ01831 940 aaPredicted RBP25.46■■□□□ 1.67
C11orf49-201ENST00000278460 HOXC9P31274 260 aa25.45■■□□□ 1.67
C11orf49-201ENST00000278460 NFE2L2Q16236 605 aa25.45■■□□□ 1.67
C11orf49-201ENST00000278460 USP19O94966 1318 aa25.45■■□□□ 1.66
C11orf49-201ENST00000278460 IL16Q14005 1332 aa25.44■■□□□ 1.66
C11orf49-201ENST00000278460 NPHP3Q7Z494 1330 aa25.44■■□□□ 1.66
C11orf49-201ENST00000278460 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
C11orf49-201ENST00000278460 PXDNQ92626 1479 aa25.43■■□□□ 1.66
C11orf49-201ENST00000278460 SULT6B1Q6IMI4 303 aa25.42■■□□□ 1.66
C11orf49-201ENST00000278460 MYH16Q9H6N6 1097 aa25.42■■□□□ 1.66
C11orf49-201ENST00000278460 CRYBG1Q9Y4K1 1723 aa25.41■■□□□ 1.66
C11orf49-201ENST00000278460 KDRP35968 1356 aa25.41■■□□□ 1.66
C11orf49-201ENST00000278460 IGSF1Q8N6C5 1336 aa25.41■■□□□ 1.66
C11orf49-201ENST00000278460 AEBP1Q8IUX7 1158 aa25.4■■□□□ 1.66
C11orf49-201ENST00000278460 IP6K1Q92551 441 aa25.4■■□□□ 1.66
C11orf49-201ENST00000278460 MED1Q15648 1581 aaPredicted RBP25.39■■□□□ 1.66
C11orf49-201ENST00000278460 GCP02774 474 aa25.38■■□□□ 1.65
C11orf49-201ENST00000278460 PPP4R2Q9NY27 417 aa25.38■■□□□ 1.65
C11orf49-201ENST00000278460 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
C11orf49-201ENST00000278460 TNS3Q68CZ2 1445 aa25.38■■□□□ 1.65
C11orf49-201ENST00000278460 RGPD5Q99666 1765 aa25.37■■□□□ 1.65
C11orf49-201ENST00000278460 LMOD3Q0VAK6 560 aa25.37■■□□□ 1.65
C11orf49-201ENST00000278460 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
C11orf49-201ENST00000278460 EYA1Q99502 592 aa25.37■■□□□ 1.65
C11orf49-201ENST00000278460 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
C11orf49-201ENST00000278460 ARHGEF25Q86VW2 580 aa25.35■■□□□ 1.65
C11orf49-201ENST00000278460 SLAIN2Q9P270 581 aa25.35■■□□□ 1.65
C11orf49-201ENST00000278460 NHSL1Q5SYE7 1610 aa25.35■■□□□ 1.65
C11orf49-201ENST00000278460 DDX17Q92841 729 aaKnown RBP25.34■■□□□ 1.65
C11orf49-201ENST00000278460 CALD1Q05682 793 aaKnown RBP25.34■■□□□ 1.65
C11orf49-201ENST00000278460 FANCIQ9NVI1 1328 aa25.32■■□□□ 1.64
C11orf49-201ENST00000278460 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.32■■□□□ 1.64
C11orf49-201ENST00000278460 SPATA31A3Q5VYP0 1347 aa25.32■■□□□ 1.64
C11orf49-201ENST00000278460 COL18A1P39060 1754 aa25.31■■□□□ 1.64
C11orf49-201ENST00000278460 CAMTA1Q9Y6Y1 1673 aa25.31■■□□□ 1.64
C11orf49-201ENST00000278460 CT47B1P0C2W7 299 aaPredicted RBP25.3■■□□□ 1.64
C11orf49-201ENST00000278460 ABCC6O95255 1503 aa25.28■■□□□ 1.64
C11orf49-201ENST00000278460 PLIN1O60240 522 aa25.27■■□□□ 1.64
C11orf49-201ENST00000278460 LTV1Q96GA3 475 aaPredicted RBP25.27■■□□□ 1.64
C11orf49-201ENST00000278460 LTBP4Q8N2S1 1624 aa25.27■■□□□ 1.64
C11orf49-201ENST00000278460 SOS2Q07890 1332 aaPredicted RBP25.27■■□□□ 1.64
C11orf49-201ENST00000278460 TSR2Q969E8 191 aaKnown RBP25.26■■□□□ 1.63
C11orf49-201ENST00000278460 IFT57Q9NWB7 429 aa25.26■■□□□ 1.63
C11orf49-201ENST00000278460 FAM208AQ9UK61 1670 aaKnown RBP25.25■■□□□ 1.63
C11orf49-201ENST00000278460 ZBTB7CA1YPR0 619 aa25.25■■□□□ 1.63
C11orf49-201ENST00000278460 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
C11orf49-201ENST00000278460 ABCA3Q99758 1704 aa25.24■■□□□ 1.63
C11orf49-201ENST00000278460 RARSP54136 660 aaKnown RBP25.24■■□□□ 1.63
C11orf49-201ENST00000278460 GNAI1P63096 354 aa25.24■■□□□ 1.63
C11orf49-201ENST00000278460 BCAR3O75815 825 aa25.23■■□□□ 1.63
C11orf49-201ENST00000278460 ZNF853P0CG23 659 aa25.23■■□□□ 1.63
C11orf49-201ENST00000278460 GAS2L2Q8NHY3 880 aa25.23■■□□□ 1.63
C11orf49-201ENST00000278460 EXOSC9Q06265 439 aaKnown RBP25.23■■□□□ 1.63
C11orf49-201ENST00000278460 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
C11orf49-201ENST00000278460 THUMPD2Q9BTF0 503 aaKnown RBP25.23■■□□□ 1.63
C11orf49-201ENST00000278460 LMO7Q8WWI1 1683 aa25.22■■□□□ 1.63
C11orf49-201ENST00000278460 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
C11orf49-201ENST00000278460 LRRC37A3O60309 1634 aa25.21■■□□□ 1.63
C11orf49-201ENST00000278460 PLEKHG5O94827 1062 aa25.21■■□□□ 1.63
C11orf49-201ENST00000278460 EXOC6Q8TAG9 804 aa25.21■■□□□ 1.63
C11orf49-201ENST00000278460 FAM83GA6ND36 823 aa25.2■■□□□ 1.62
C11orf49-201ENST00000278460 VIRMAQ69YN4 1812 aaKnown RBP25.2■■□□□ 1.62
C11orf49-201ENST00000278460 NBPF6Q5VWK0 638 aa25.19■■□□□ 1.62
C11orf49-201ENST00000278460 NBPF4Q96M43 638 aa25.19■■□□□ 1.62
C11orf49-201ENST00000278460 CFAP44Q96MT7 982 aa25.19■■□□□ 1.62
C11orf49-201ENST00000278460 CPDO75976 1380 aa25.19■■□□□ 1.62
C11orf49-201ENST00000278460 ZC3H6P61129 1189 aaKnown RBP25.19■■□□□ 1.62
C11orf49-201ENST00000278460 ANKRD24Q8TF21 1146 aa25.19■■□□□ 1.62
C11orf49-201ENST00000278460 HTATSF1O43719 755 aaKnown RBP25.18■■□□□ 1.62
C11orf49-201ENST00000278460 DCTN1Q14203 1278 aa25.17■■□□□ 1.62
C11orf49-201ENST00000278460 CRBNQ96SW2 442 aa25.17■■□□□ 1.62
C11orf49-201ENST00000278460 AXIN2Q9Y2T1 843 aa25.17■■□□□ 1.62
C11orf49-201ENST00000278460 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
C11orf49-201ENST00000278460 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
C11orf49-201ENST00000278460 C20orf194Q5TEA3 1177 aa25.16■■□□□ 1.62
C11orf49-201ENST00000278460 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
C11orf49-201ENST00000278460 USHBP1Q8N6Y0 703 aa25.16■■□□□ 1.62
C11orf49-201ENST00000278460 CABLES1Q8TDN4 633 aa25.15■■□□□ 1.62
C11orf49-201ENST00000278460 ERBB3P21860 1342 aa25.15■■□□□ 1.62
C11orf49-201ENST00000278460 LRRC59Q96AG4 307 aaKnown RBP25.15■■□□□ 1.62
C11orf49-201ENST00000278460 ZNF428Q96B54 188 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms