RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SPRYD3Q8NCJ5 442 aa19.17■□□□□ 0.66
DDX56-201ENST00000258772 CHMP4BQ9H444 224 aaKnown RBP19.17■□□□□ 0.66
DDX56-201ENST00000258772 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
DDX56-201ENST00000258772 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
DDX56-201ENST00000258772 MBIPQ9NS73 344 aa19.17■□□□□ 0.66
DDX56-201ENST00000258772 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
DDX56-201ENST00000258772 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
DDX56-201ENST00000258772 TSPOAP1O95153 1857 aa19.16■□□□□ 0.66
DDX56-201ENST00000258772 PTCH1Q13635 1447 aa19.16■□□□□ 0.66
DDX56-201ENST00000258772 DLG5Q8TDM6 1919 aa19.15■□□□□ 0.66
DDX56-201ENST00000258772 NRXN3Q9Y4C0 1643 aa19.15■□□□□ 0.66
DDX56-201ENST00000258772 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
DDX56-201ENST00000258772 METP08581 1390 aa19.15■□□□□ 0.66
DDX56-201ENST00000258772 ELL2O00472 640 aaPredicted RBP19.14■□□□□ 0.66
DDX56-201ENST00000258772 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.66
DDX56-201ENST00000258772 GCC1Q96CN9 775 aa19.14■□□□□ 0.66
DDX56-201ENST00000258772 MLECQ14165 292 aa19.14■□□□□ 0.65
DDX56-201ENST00000258772 COG3Q96JB2 828 aa19.14■□□□□ 0.65
DDX56-201ENST00000258772 DIP2BQ9P265 1576 aa19.14■□□□□ 0.65
DDX56-201ENST00000258772 RBM25P49756 843 aaKnown RBP19.13■□□□□ 0.65
DDX56-201ENST00000258772 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
DDX56-201ENST00000258772 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
DDX56-201ENST00000258772 CCDC61Q9Y6R9 512 aa19.13■□□□□ 0.65
DDX56-201ENST00000258772 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
DDX56-201ENST00000258772 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
DDX56-201ENST00000258772 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
DDX56-201ENST00000258772 CHMP5Q9NZZ3 219 aa19.13■□□□□ 0.65
DDX56-201ENST00000258772 ABCC4O15439 1325 aa19.12■□□□□ 0.65
DDX56-201ENST00000258772 RRS1Q15050 365 aaKnown RBP19.12■□□□□ 0.65
DDX56-201ENST00000258772 BMP2KLQ5H9B9 411 aa19.12■□□□□ 0.65
DDX56-201ENST00000258772 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
DDX56-201ENST00000258772 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
DDX56-201ENST00000258772 CPS1P31327 1500 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 HSCBQ8IWL3 235 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 MON2Q7Z3U7 1717 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 MCM4P33991 863 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
DDX56-201ENST00000258772 SIRT2Q8IXJ6 389 aa19.1■□□□□ 0.65
DDX56-201ENST00000258772 FAM83GA6ND36 823 aa19.09■□□□□ 0.65
DDX56-201ENST00000258772 ZNF692Q9BU19 519 aaPredicted RBP19.08■□□□□ 0.65
DDX56-201ENST00000258772 SNX21Q969T3 373 aa19.08■□□□□ 0.64
DDX56-201ENST00000258772 API5Q9BZZ5 524 aaKnown RBP19.08■□□□□ 0.64
DDX56-201ENST00000258772 AKAP12Q02952 1782 aa19.08■□□□□ 0.64
DDX56-201ENST00000258772 TECPR2O15040 1411 aa19.07■□□□□ 0.64
DDX56-201ENST00000258772 C3P01024 1663 aa19.07■□□□□ 0.64
DDX56-201ENST00000258772 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
DDX56-201ENST00000258772 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
DDX56-201ENST00000258772 HDGFP51858 240 aaKnown RBP19.06■□□□□ 0.64
DDX56-201ENST00000258772 L1TD1Q5T7N2 865 aaKnown RBP19.05■□□□□ 0.64
DDX56-201ENST00000258772 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
DDX56-201ENST00000258772 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
DDX56-201ENST00000258772 PRR36Q9H6K5 1346 aa19.04■□□□□ 0.64
DDX56-201ENST00000258772 DDIT3P35638 169 aa19.03■□□□□ 0.64
DDX56-201ENST00000258772 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
DDX56-201ENST00000258772 KIF2CQ99661 725 aa19.03■□□□□ 0.64
DDX56-201ENST00000258772 ESF1Q9H501 851 aaKnown RBP19.03■□□□□ 0.64
DDX56-201ENST00000258772 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
DDX56-201ENST00000258772 EIF4A2Q14240 407 aaKnown RBP19.02■□□□□ 0.64
DDX56-201ENST00000258772 AEBP1Q8IUX7 1158 aa19.01■□□□□ 0.63
DDX56-201ENST00000258772 SULT6B1Q6IMI4 303 aa19.01■□□□□ 0.63
DDX56-201ENST00000258772 TRAK2O60296 914 aa19■□□□□ 0.63
DDX56-201ENST00000258772 INTS3Q68E01 1043 aaKnown RBP19■□□□□ 0.63
DDX56-201ENST00000258772 DCTPP1Q9H773 170 aa19■□□□□ 0.63
DDX56-201ENST00000258772 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
DDX56-201ENST00000258772 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
DDX56-201ENST00000258772 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
DDX56-201ENST00000258772 FSD2A1L4K1 749 aa18.98■□□□□ 0.63
DDX56-201ENST00000258772 CHL1O00533 1208 aa18.98■□□□□ 0.63
DDX56-201ENST00000258772 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
DDX56-201ENST00000258772 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
DDX56-201ENST00000258772 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
DDX56-201ENST00000258772 PLEKHM2Q8IWE5 1019 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
DDX56-201ENST00000258772 CIZ1Q9ULV3 898 aaPredicted RBP18.97■□□□□ 0.63
DDX56-201ENST00000258772 GOLGA6L3A6NEY3 463 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 CDC45O75419 566 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 KRT24Q2M2I5 525 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 ACEP12821 1306 aa18.97■□□□□ 0.63
DDX56-201ENST00000258772 TNRQ92752 1358 aa18.96■□□□□ 0.63
DDX56-201ENST00000258772 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
DDX56-201ENST00000258772 GSPT1P15170 499 aaKnown RBP18.96■□□□□ 0.63
DDX56-201ENST00000258772 ANO8Q9HCE9 1232 aaPredicted RBP18.96■□□□□ 0.63
DDX56-201ENST00000258772 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
DDX56-201ENST00000258772 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
DDX56-201ENST00000258772 XRCC6P12956 609 aaKnown RBP eCLIP18.95■□□□□ 0.62
DDX56-201ENST00000258772 MCM10Q7L590 875 aa18.95■□□□□ 0.62
DDX56-201ENST00000258772 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
DDX56-201ENST00000258772 KIAA0232Q92628 1395 aa18.95■□□□□ 0.62
DDX56-201ENST00000258772 OVOS2A0A0J9YW53 1432 aa18.94■□□□□ 0.62
DDX56-201ENST00000258772 RGS12O14924 1447 aa18.94■□□□□ 0.62
DDX56-201ENST00000258772 OVOS2Q6IE36 1432 aa18.94■□□□□ 0.62
DDX56-201ENST00000258772 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
DDX56-201ENST00000258772 TNPO1Q92973 898 aaKnown RBP18.94■□□□□ 0.62
DDX56-201ENST00000258772 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
DDX56-201ENST00000258772 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
DDX56-201ENST00000258772 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
DDX56-201ENST00000258772 K7ELQ4 463 aaPredicted RBP18.93■□□□□ 0.62
DDX56-201ENST00000258772 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms