RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
UBQLN1-201ENST00000257468 KIF16BQ96L93 1317 aa21.05■□□□□ 0.96
UBQLN1-201ENST00000257468 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
UBQLN1-201ENST00000257468 DLG5Q8TDM6 1919 aa21.05■□□□□ 0.96
UBQLN1-201ENST00000257468 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
UBQLN1-201ENST00000257468 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
UBQLN1-201ENST00000257468 ALDH1L2Q3SY69 923 aa21.03■□□□□ 0.96
UBQLN1-201ENST00000257468 MBIPQ9NS73 344 aa21.03■□□□□ 0.96
UBQLN1-201ENST00000257468 ZBTB40Q9NUA8 1239 aa21.02■□□□□ 0.96
UBQLN1-201ENST00000257468 ACEP12821 1306 aa21.02■□□□□ 0.96
UBQLN1-201ENST00000257468 IPO8O15397 1037 aaKnown RBP21.02■□□□□ 0.95
UBQLN1-201ENST00000257468 VAMP4O75379 141 aa21.02■□□□□ 0.95
UBQLN1-201ENST00000257468 DCTN1Q14203 1278 aa21.02■□□□□ 0.95
UBQLN1-201ENST00000257468 ZNF692Q9BU19 519 aaPredicted RBP21.02■□□□□ 0.95
UBQLN1-201ENST00000257468 PTPRUQ92729 1446 aa21.02■□□□□ 0.95
UBQLN1-201ENST00000257468 HDAC1Q13547 482 aaPredicted RBP21.01■□□□□ 0.95
UBQLN1-201ENST00000257468 AEBP1Q8IUX7 1158 aa21.01■□□□□ 0.95
UBQLN1-201ENST00000257468 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
UBQLN1-201ENST00000257468 PLEKHG1Q9ULL1 1385 aa21.01■□□□□ 0.95
UBQLN1-201ENST00000257468 NRKQ7Z2Y5 1582 aa21.01■□□□□ 0.95
UBQLN1-201ENST00000257468 BCL11AQ9H165 835 aa21■□□□□ 0.95
UBQLN1-201ENST00000257468 FER1L4A9Z1Z3 1794 aa21■□□□□ 0.95
UBQLN1-201ENST00000257468 TOPAZ1Q8N9V7 1692 aa21■□□□□ 0.95
UBQLN1-201ENST00000257468 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
UBQLN1-201ENST00000257468 SOX12O15370 315 aa20.99■□□□□ 0.95
UBQLN1-201ENST00000257468 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
UBQLN1-201ENST00000257468 GNAI1P63096 354 aa20.99■□□□□ 0.95
UBQLN1-201ENST00000257468 MRPL50Q8N5N7 158 aaKnown RBP20.98■□□□□ 0.95
UBQLN1-201ENST00000257468 EIF4A2Q14240 407 aaKnown RBP20.98■□□□□ 0.95
UBQLN1-201ENST00000257468 CALD1Q05682 793 aaKnown RBP20.97■□□□□ 0.95
UBQLN1-201ENST00000257468 NFKBIBQ15653 356 aa20.97■□□□□ 0.95
UBQLN1-201ENST00000257468 C8orf58Q8NAV2 365 aa20.97■□□□□ 0.95
UBQLN1-201ENST00000257468 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
UBQLN1-201ENST00000257468 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
UBQLN1-201ENST00000257468 OVOS2A0A0J9YW53 1432 aa20.96■□□□□ 0.95
UBQLN1-201ENST00000257468 USP6P35125 1406 aa20.96■□□□□ 0.95
UBQLN1-201ENST00000257468 OVOS2Q6IE36 1432 aa20.96■□□□□ 0.95
UBQLN1-201ENST00000257468 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.95
UBQLN1-201ENST00000257468 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
UBQLN1-201ENST00000257468 SMC5Q8IY18 1101 aa20.95■□□□□ 0.94
UBQLN1-201ENST00000257468 C1orf115Q9H7X2 142 aa20.95■□□□□ 0.94
UBQLN1-201ENST00000257468 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
UBQLN1-201ENST00000257468 BRPF1P55201 1214 aaPredicted RBP20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 PLEKHG3A1L390 1219 aa20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 AMOTL2Q9Y2J4 779 aa20.94■□□□□ 0.94
UBQLN1-201ENST00000257468 LMOD3Q0VAK6 560 aa20.93■□□□□ 0.94
UBQLN1-201ENST00000257468 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
UBQLN1-201ENST00000257468 PTCH1Q13635 1447 aa20.93■□□□□ 0.94
UBQLN1-201ENST00000257468 TBC1D32Q96NH3 1257 aa20.92■□□□□ 0.94
UBQLN1-201ENST00000257468 ZBTB7BO15156 539 aaPredicted RBP20.91■□□□□ 0.94
UBQLN1-201ENST00000257468 NALCNQ8IZF0 1738 aa20.91■□□□□ 0.94
UBQLN1-201ENST00000257468 KRT24Q2M2I5 525 aa20.9■□□□□ 0.94
UBQLN1-201ENST00000257468 UPF2Q9HAU5 1272 aaKnown RBP20.9■□□□□ 0.94
UBQLN1-201ENST00000257468 SLIT1O75093 1534 aa20.9■□□□□ 0.94
UBQLN1-201ENST00000257468 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
UBQLN1-201ENST00000257468 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.94
UBQLN1-201ENST00000257468 MCM10Q7L590 875 aa20.89■□□□□ 0.94
UBQLN1-201ENST00000257468 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
UBQLN1-201ENST00000257468 PIK3R4Q99570 1358 aa20.89■□□□□ 0.93
UBQLN1-201ENST00000257468 NUCB1Q02818 461 aa20.88■□□□□ 0.93
UBQLN1-201ENST00000257468 ARHGAP45Q92619 1136 aa20.88■□□□□ 0.93
UBQLN1-201ENST00000257468 ABCC4O15439 1325 aa20.88■□□□□ 0.93
UBQLN1-201ENST00000257468 SSH2Q76I76 1423 aa20.88■□□□□ 0.93
UBQLN1-201ENST00000257468 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
UBQLN1-201ENST00000257468 FRAT2O75474 233 aaPredicted RBP20.87■□□□□ 0.93
UBQLN1-201ENST00000257468 USP31Q70CQ4 1352 aa20.86■□□□□ 0.93
UBQLN1-201ENST00000257468 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
UBQLN1-201ENST00000257468 RIMS1Q86UR5 1692 aaKnown RBP20.86■□□□□ 0.93
UBQLN1-201ENST00000257468 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
UBQLN1-201ENST00000257468 MAP3K19Q56UN5 1328 aa20.85■□□□□ 0.93
UBQLN1-201ENST00000257468 BECN1Q14457 450 aa20.85■□□□□ 0.93
UBQLN1-201ENST00000257468 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
UBQLN1-201ENST00000257468 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
UBQLN1-201ENST00000257468 SIRT2Q8IXJ6 389 aa20.84■□□□□ 0.93
UBQLN1-201ENST00000257468 NGDNQ8NEJ9 315 aaKnown RBP20.84■□□□□ 0.93
UBQLN1-201ENST00000257468 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
UBQLN1-201ENST00000257468 FOXO3O43524 673 aa20.83■□□□□ 0.92
UBQLN1-201ENST00000257468 TBC1D2Q9BYX2 928 aa20.83■□□□□ 0.92
UBQLN1-201ENST00000257468 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.92
UBQLN1-201ENST00000257468 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
UBQLN1-201ENST00000257468 FMN2Q9NZ56 1722 aa20.82■□□□□ 0.92
UBQLN1-201ENST00000257468 C22orf23Q9BZE7 217 aa20.81■□□□□ 0.92
UBQLN1-201ENST00000257468 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
UBQLN1-201ENST00000257468 CHL1O00533 1208 aa20.8■□□□□ 0.92
UBQLN1-201ENST00000257468 API5Q9BZZ5 524 aaKnown RBP20.8■□□□□ 0.92
UBQLN1-201ENST00000257468 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
UBQLN1-201ENST00000257468 TTC21AQ8NDW8 1320 aa20.8■□□□□ 0.92
UBQLN1-201ENST00000257468 NUTM2GQ5VZR2 741 aa20.79■□□□□ 0.92
UBQLN1-201ENST00000257468 THEMISQ8N1K5 641 aaPredicted RBP20.79■□□□□ 0.92
UBQLN1-201ENST00000257468 KCNA6P17658 529 aa20.78■□□□□ 0.92
UBQLN1-201ENST00000257468 ADAMTSL3P82987 1691 aa20.78■□□□□ 0.92
UBQLN1-201ENST00000257468 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
UBQLN1-201ENST00000257468 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
UBQLN1-201ENST00000257468 RGS12O14924 1447 aa20.77■□□□□ 0.92
UBQLN1-201ENST00000257468 CRB1P82279 1406 aa20.77■□□□□ 0.92
UBQLN1-201ENST00000257468 XRN1Q8IZH2 1706 aaKnown RBP20.77■□□□□ 0.92
UBQLN1-201ENST00000257468 GCC1Q96CN9 775 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms