RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 NUTM2FA1L443 756 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 SOX12O15370 315 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 MYO1BO43795 1136 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 NBPF20Q3BBV1 942 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 SMC4Q9NTJ3 1288 aa4.65□□□□□ -1.67
PHTF2-201ENST00000248550 HSPA6P17066 643 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 COG3Q96JB2 828 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 UTP14AQ9BVJ6 771 aaKnown RBP4.64□□□□□ -1.67
PHTF2-201ENST00000248550 SPHKAPQ2M3C7 1700 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 EIF4E1BA6NMX2 242 aaKnown RBP4.64□□□□□ -1.67
PHTF2-201ENST00000248550 KCNJ4P48050 445 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 TMEM87AQ8NBN3 555 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 CSPP1Q1MSJ5 1256 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 SLC4A8Q2Y0W8 1093 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 EAPPQ56P03 285 aaPredicted RBP4.64□□□□□ -1.67
PHTF2-201ENST00000248550 C2orf69Q8N8R5 385 aa4.64□□□□□ -1.67
PHTF2-201ENST00000248550 TEX13AQ9BXU3 409 aaPredicted RBP4.64□□□□□ -1.67
PHTF2-201ENST00000248550 ABCC5O15440 1437 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 H0YIN7 160 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 H7C1D1 291 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 WASLO00401 505 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 VPS72Q15906 364 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 DALRD3Q5D0E6 543 aaKnown RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 SLC27A3Q5K4L6 730 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.674e-10■□□□□ 8.7
PHTF2-201ENST00000248550 LBHD1Q9BQE6 289 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 RTCBQ9Y3I0 505 aaKnown RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 EVC2Q86UK5 1308 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 PNMA8AQ86V59 439 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 SYMPKQ92797 1274 aaKnown RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 RNF216Q9NWF9 866 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 PIK3C2BO00750 1634 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 SBNO1A3KN83 1393 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 NUP155O75694 1391 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 VEGFAP15692 232 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 HRCP23327 699 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 PLEKHO1Q53GL0 409 aaPredicted RBP4.63□□□□□ -1.67
PHTF2-201ENST00000248550 CC2D2BQ6DHV5 1058 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 CDC42BPGQ6DT37 1551 aa4.63□□□□□ -1.67
PHTF2-201ENST00000248550 FOXO3O43524 673 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 FRAT2O75474 233 aaPredicted RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 CNKSR1Q969H4 720 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 PLEKHG2Q9H7P9 1386 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 TRIM37O94972 964 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 RBM42Q9BTD8 480 aaKnown RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 PPM1GO15355 546 aaPredicted RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 STARD3NLO95772 234 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 UBXN2AP68543 259 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 EN1Q05925 392 aaPredicted RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 TAF7LQ5H9L4 462 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 AMOTL1Q8IY63 956 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 BTG4Q9NY30 223 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 TMOD3Q9NYL9 352 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 FAM50BQ9Y247 325 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 KDM2AQ9Y2K7 1162 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 ATP7BP35670 1465 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 USP47Q96K76 1375 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 SAFB2Q14151 953 aaKnown RBP eCLIP4.62□□□□□ -1.677e-6■□□□□ 10.4
PHTF2-201ENST00000248550 DDX54Q8TDD1 881 aaKnown RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 EYA3Q99504 573 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 CCNL1Q9UK58 526 aaPredicted RBP4.62□□□□□ -1.67
PHTF2-201ENST00000248550 DLC1Q96QB1 1528 aa4.62□□□□□ -1.67
PHTF2-201ENST00000248550 TOMM70O94826 608 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 TRAPPC3LQ5T215 181 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 RPGRQ92834 1020 aaKnown RBP4.61□□□□□ -1.67
PHTF2-201ENST00000248550 TEFQ10587 303 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 PIM2Q9P1W9 311 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 COL22A1Q8NFW1 1626 aaPredicted RBP4.61□□□□□ -1.67
PHTF2-201ENST00000248550 HOXD11P31277 338 aaPredicted RBP4.61□□□□□ -1.67
PHTF2-201ENST00000248550 KIF6Q6ZMV9 814 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 FBXW7Q969H0 707 aa4.61□□□□□ -1.67
PHTF2-201ENST00000248550 RBM46Q8TBY0 533 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 DCPSQ96C86 337 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 ABCC6O95255 1503 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 NKX2-3Q8TAU0 364 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 CCDC102AQ96A19 550 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 BMS1Q14692 1282 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 CCDC152Q4G0S7 254 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 ASXL1Q8IXJ9 1541 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 ROBO1Q9Y6N7 1651 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 GLRX3O76003 335 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 ALDH1A1P00352 501 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 TNIP1Q15025 636 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 PKN2Q16513 984 aaKnown RBP4.6□□□□□ -1.67
PHTF2-201ENST00000248550 RNF181Q9P0P0 153 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 CD2APQ9Y5K6 639 aa4.6□□□□□ -1.67
PHTF2-201ENST00000248550 CCDC7Q96M83 1385 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 NBPF1Q3BBV0 1214 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 ARMC9Q7Z3E5 817 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 NIM1KQ8IY84 436 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 KNDC1Q76NI1 1749 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 LRRIQ1Q96JM4 1722 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 NHSL1Q5SYE7 1610 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 LPXNO60711 386 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 CALD1Q05682 793 aaKnown RBP4.59□□□□□ -1.67
PHTF2-201ENST00000248550 OGFOD1Q8N543 542 aa4.59□□□□□ -1.67
PHTF2-201ENST00000248550 MPHOSPH6Q99547 160 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms