RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 KIF16BQ96L93 1317 aa22.1■■□□□ 1.13
LRFN3-201ENST00000246529 ZNF692Q9BU19 519 aaPredicted RBP22.1■■□□□ 1.13
LRFN3-201ENST00000246529 ACEP12821 1306 aa22.1■■□□□ 1.13
LRFN3-201ENST00000246529 DCTN1Q14203 1278 aa22.09■■□□□ 1.13
LRFN3-201ENST00000246529 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
LRFN3-201ENST00000246529 MBIPQ9NS73 344 aa22.09■■□□□ 1.13
LRFN3-201ENST00000246529 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
LRFN3-201ENST00000246529 IPO8O15397 1037 aaKnown RBP22.09■■□□□ 1.13
LRFN3-201ENST00000246529 VAMP4O75379 141 aa22.09■■□□□ 1.13
LRFN3-201ENST00000246529 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.13
LRFN3-201ENST00000246529 C3P01024 1663 aa22.08■■□□□ 1.13
LRFN3-201ENST00000246529 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
LRFN3-201ENST00000246529 ZBTB40Q9NUA8 1239 aa22.08■■□□□ 1.13
LRFN3-201ENST00000246529 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.12
LRFN3-201ENST00000246529 SOX12O15370 315 aa22.08■■□□□ 1.12
LRFN3-201ENST00000246529 PTPRUQ92729 1446 aa22.07■■□□□ 1.12
LRFN3-201ENST00000246529 HDAC1Q13547 482 aaPredicted RBP22.07■■□□□ 1.12
LRFN3-201ENST00000246529 IFT57Q9NWB7 429 aa22.06■■□□□ 1.12
LRFN3-201ENST00000246529 AKAP12Q02952 1782 aa22.06■■□□□ 1.12
LRFN3-201ENST00000246529 VIRMAQ69YN4 1812 aaKnown RBP22.06■■□□□ 1.12
LRFN3-201ENST00000246529 GNAI1P63096 354 aa22.06■■□□□ 1.12
LRFN3-201ENST00000246529 ITSN1Q15811 1721 aa22.05■■□□□ 1.12
LRFN3-201ENST00000246529 ZNF853P0CG23 659 aa22.05■■□□□ 1.12
LRFN3-201ENST00000246529 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
LRFN3-201ENST00000246529 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
LRFN3-201ENST00000246529 CALD1Q05682 793 aaKnown RBP22.04■■□□□ 1.12
LRFN3-201ENST00000246529 C8orf58Q8NAV2 365 aa22.04■■□□□ 1.12
LRFN3-201ENST00000246529 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
LRFN3-201ENST00000246529 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
LRFN3-201ENST00000246529 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
LRFN3-201ENST00000246529 PLEKHG3A1L390 1219 aa22.02■■□□□ 1.11
LRFN3-201ENST00000246529 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.11
LRFN3-201ENST00000246529 TWISTNBQ3B726 338 aaPredicted RBP22.01■■□□□ 1.11
LRFN3-201ENST00000246529 CFAP44Q96MT7 982 aa22.01■■□□□ 1.11
LRFN3-201ENST00000246529 C1orf115Q9H7X2 142 aa22.01■■□□□ 1.11
LRFN3-201ENST00000246529 USP6P35125 1406 aa22■■□□□ 1.11
LRFN3-201ENST00000246529 NFKBIBQ15653 356 aa22■■□□□ 1.11
LRFN3-201ENST00000246529 SMC5Q8IY18 1101 aa22■■□□□ 1.11
LRFN3-201ENST00000246529 BRPF1P55201 1214 aaPredicted RBP22■■□□□ 1.11
LRFN3-201ENST00000246529 ZNF428Q96B54 188 aa22■■□□□ 1.11
LRFN3-201ENST00000246529 USP35Q9P2H5 1018 aa22■■□□□ 1.11
LRFN3-201ENST00000246529 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
LRFN3-201ENST00000246529 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
LRFN3-201ENST00000246529 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
LRFN3-201ENST00000246529 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
LRFN3-201ENST00000246529 ZBTB7BO15156 539 aaPredicted RBP21.97■■□□□ 1.11
LRFN3-201ENST00000246529 DLG5Q8TDM6 1919 aa21.97■■□□□ 1.11
LRFN3-201ENST00000246529 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
LRFN3-201ENST00000246529 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
LRFN3-201ENST00000246529 MCM10Q7L590 875 aa21.96■■□□□ 1.11
LRFN3-201ENST00000246529 TBC1D32Q96NH3 1257 aa21.96■■□□□ 1.11
LRFN3-201ENST00000246529 LNPKQ9C0E8 428 aa21.96■■□□□ 1.11
LRFN3-201ENST00000246529 UPF2Q9HAU5 1272 aaKnown RBP21.96■■□□□ 1.11
LRFN3-201ENST00000246529 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
LRFN3-201ENST00000246529 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
LRFN3-201ENST00000246529 NUCB1Q02818 461 aa21.94■■□□□ 1.1
LRFN3-201ENST00000246529 PEAK1Q9H792 1746 aa21.93■■□□□ 1.1
LRFN3-201ENST00000246529 TBX22Q9Y458 520 aa21.92■■□□□ 1.1
LRFN3-201ENST00000246529 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
LRFN3-201ENST00000246529 ABCC4O15439 1325 aa21.92■■□□□ 1.1
LRFN3-201ENST00000246529 MAP3K19Q56UN5 1328 aa21.92■■□□□ 1.1
LRFN3-201ENST00000246529 MFAP1P55081 439 aaKnown RBP21.91■■□□□ 1.1
LRFN3-201ENST00000246529 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
LRFN3-201ENST00000246529 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
LRFN3-201ENST00000246529 USP31Q70CQ4 1352 aa21.91■■□□□ 1.1
LRFN3-201ENST00000246529 ARHGAP23Q9P227 1491 aa21.9■■□□□ 1.1
LRFN3-201ENST00000246529 CHD1LQ86WJ1 897 aa21.9■■□□□ 1.1
LRFN3-201ENST00000246529 SLIT1O75093 1534 aa21.9■■□□□ 1.1
LRFN3-201ENST00000246529 FRAT2O75474 233 aaPredicted RBP21.89■■□□□ 1.1
LRFN3-201ENST00000246529 SIRT2Q8IXJ6 389 aa21.89■■□□□ 1.1
LRFN3-201ENST00000246529 FOXO3O43524 673 aa21.89■■□□□ 1.09
LRFN3-201ENST00000246529 BECN1Q14457 450 aa21.89■■□□□ 1.09
LRFN3-201ENST00000246529 SLKQ9H2G2 1235 aaPredicted RBP21.88■■□□□ 1.09
LRFN3-201ENST00000246529 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
LRFN3-201ENST00000246529 THEMISQ8N1K5 641 aaPredicted RBP21.88■■□□□ 1.09
LRFN3-201ENST00000246529 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
LRFN3-201ENST00000246529 NUTM2GQ5VZR2 741 aa21.87■■□□□ 1.09
LRFN3-201ENST00000246529 CHL1O00533 1208 aa21.86■■□□□ 1.09
LRFN3-201ENST00000246529 KCNA6P17658 529 aa21.86■■□□□ 1.09
LRFN3-201ENST00000246529 TBC1D2Q9BYX2 928 aa21.86■■□□□ 1.09
LRFN3-201ENST00000246529 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
LRFN3-201ENST00000246529 DIP2AQ14689 1571 aa21.86■■□□□ 1.09
LRFN3-201ENST00000246529 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
LRFN3-201ENST00000246529 C22orf23Q9BZE7 217 aa21.85■■□□□ 1.09
LRFN3-201ENST00000246529 TTC21AQ8NDW8 1320 aa21.85■■□□□ 1.09
LRFN3-201ENST00000246529 MTHFSDQ2M296 383 aaKnown RBP21.84■■□□□ 1.09
LRFN3-201ENST00000246529 AMPHP49418 695 aa21.83■■□□□ 1.09
LRFN3-201ENST00000246529 RGPD8O14715 1765 aaPredicted RBP21.83■■□□□ 1.08
LRFN3-201ENST00000246529 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
LRFN3-201ENST00000246529 RGPD1P0DJD0 1748 aa21.82■■□□□ 1.08
LRFN3-201ENST00000246529 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
LRFN3-201ENST00000246529 SPRYD3Q8NCJ5 442 aa21.82■■□□□ 1.08
LRFN3-201ENST00000246529 EYA1Q99502 592 aa21.82■■□□□ 1.08
LRFN3-201ENST00000246529 NLRP6P59044 892 aa21.81■■□□□ 1.08
LRFN3-201ENST00000246529 GCC1Q96CN9 775 aa21.81■■□□□ 1.08
LRFN3-201ENST00000246529 CRB1P82279 1406 aa21.81■■□□□ 1.08
LRFN3-201ENST00000246529 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
LRFN3-201ENST00000246529 FLT4P35916 1363 aa21.81■■□□□ 1.08
LRFN3-201ENST00000246529 RIMS1Q86UR5 1692 aaKnown RBP21.81■■□□□ 1.08
LRFN3-201ENST00000246529 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms