RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 CCDC61Q9Y6R9 512 aa7.11□□□□□ -1.27
TRAPPC13-201ENST00000231526 ROBO2Q9HCK4 1378 aa7.11□□□□□ -1.27
TRAPPC13-201ENST00000231526 TECPR2O15040 1411 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 GABBR2O75899 941 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 ANKLE2Q86XL3 938 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 NUDT16Q96DE0 195 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 CEP170BQ9Y4F5 1589 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 ARHGAP23Q9P227 1491 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 FYB1O15117 783 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 MTMR7Q9Y216 660 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 NUDCQ9Y266 331 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 NCKAP5LQ9HCH0 1330 aa7.1□□□□□ -1.27
TRAPPC13-201ENST00000231526 NSD2O96028 1365 aa7.09□□□□□ -1.27
TRAPPC13-201ENST00000231526 MLLT3P42568 568 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-201ENST00000231526 CCDC146Q8IYE0 955 aa7.09□□□□□ -1.27
TRAPPC13-201ENST00000231526 CFAP53Q96M91 514 aa7.09□□□□□ -1.27
TRAPPC13-201ENST00000231526 PPIP5K1Q6PFW1 1433 aa7.09□□□□□ -1.27
TRAPPC13-201ENST00000231526 PTPRUQ92729 1446 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 CD163L1Q9NR16 1453 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 POLR3AO14802 1390 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 CPS1P31327 1500 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 ADAMTSL3P82987 1691 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 RBM25P49756 843 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 FOXD4L5Q5VV16 416 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 KNDC1Q76NI1 1749 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 FOXD4L4Q8WXT5 416 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 FAM212AQ96EL1 285 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 MED14O60244 1454 aa7.08□□□□□ -1.28
TRAPPC13-201ENST00000231526 BLMP54132 1417 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 KCNA6P17658 529 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 SMG6Q86US8 1419 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 PPM1GO15355 546 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 CDCA7LQ96GN5 454 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 INSRP06213 1382 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 USP32Q8NFA0 1604 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 ATP7BP35670 1465 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 APAF1O14727 1248 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 ZNF592Q92610 1267 aa7.07□□□□□ -1.28
TRAPPC13-201ENST00000231526 FBLN1P23142 703 aa7.06□□□□□ -1.28
TRAPPC13-201ENST00000231526 U2AF1L5P0DN76 240 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-201ENST00000231526 U2AF1Q01081 240 aaKnown RBP eCLIP7.06□□□□□ -1.281e-6■■□□□ 12.9
TRAPPC13-201ENST00000231526 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
TRAPPC13-201ENST00000231526 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 GSE1Q14687 1217 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 NME9Q86XW9 330 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 RBM33Q96EV2 1170 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 MKRN3Q13064 507 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 COG3Q96JB2 828 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 WDR70Q9NW82 654 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 ACEP12821 1306 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 CPSF1Q10570 1443 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 PTCH1Q13635 1447 aa7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 EDC4Q6P2E9 1401 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-201ENST00000231526 A0A0U1RQG5 324 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 PHF8Q9UPP1 1060 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 DIP2AQ14689 1571 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 GOLGA2Q08379 1002 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 TICAM2Q86XR7 235 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 NGDNQ8NEJ9 315 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 CWC22Q9HCG8 908 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 ZRANB1Q9UGI0 708 aa7.04□□□□□ -1.28
TRAPPC13-201ENST00000231526 TMED8Q6PL24 325 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 PAK3O75914 559 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 RUNDC1Q96C34 613 aa7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 ZBTB47Q9UFB7 747 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 RRP7AQ9Y3A4 280 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 ZNF142P52746 1687 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-201ENST00000231526 DIAPH1O60610 1272 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 TCP11L2Q8N4U5 519 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 POLKQ9UBT6 870 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 CDC42BPGQ6DT37 1551 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 ADGRB2O60241 1585 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 SOX12O15370 315 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 RRS1Q15050 365 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 EMILIN1Q9Y6C2 1016 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 KIF20BQ96Q89 1820 aa7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 NPHP4O75161 1426 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-201ENST00000231526 MAP2P11137 1827 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 TTC21BQ7Z4L5 1316 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 NGEFQ8N5V2 710 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 EFCAB3Q8N7B9 438 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 PCDH10Q9P2E7 1040 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 USP35Q9P2H5 1018 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 ANKRD26Q9UPS8 1709 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 ZNF521Q96K83 1311 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 CERS3Q8IU89 383 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 ZNF579Q8NAF0 562 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 ANO8Q9HCE9 1232 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 FARP1Q9Y4F1 1045 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-201ENST00000231526 ITSN1Q15811 1721 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms