RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 AATKQ6ZMQ8 1374 aa20.52■□□□□ 0.88
LTBR-201ENST00000228918 WASLO00401 505 aaPredicted RBP20.52■□□□□ 0.88
LTBR-201ENST00000228918 VAMP4O75379 141 aa20.51■□□□□ 0.87
LTBR-201ENST00000228918 MRPL50Q8N5N7 158 aaKnown RBP20.51■□□□□ 0.87
LTBR-201ENST00000228918 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
LTBR-201ENST00000228918 IFT57Q9NWB7 429 aa20.51■□□□□ 0.87
LTBR-201ENST00000228918 NME9Q86XW9 330 aa20.5■□□□□ 0.87
LTBR-201ENST00000228918 AKAP12Q02952 1782 aa20.5■□□□□ 0.87
LTBR-201ENST00000228918 GNAI1P63096 354 aa20.5■□□□□ 0.87
LTBR-201ENST00000228918 ARHGAP45Q92619 1136 aa20.5■□□□□ 0.87
LTBR-201ENST00000228918 CPS1P31327 1500 aa20.49■□□□□ 0.87
LTBR-201ENST00000228918 C3P01024 1663 aa20.49■□□□□ 0.87
LTBR-201ENST00000228918 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
LTBR-201ENST00000228918 METP08581 1390 aa20.49■□□□□ 0.87
LTBR-201ENST00000228918 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
LTBR-201ENST00000228918 ITSN1Q15811 1721 aa20.48■□□□□ 0.87
LTBR-201ENST00000228918 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
LTBR-201ENST00000228918 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
LTBR-201ENST00000228918 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
LTBR-201ENST00000228918 TECPR2O15040 1411 aa20.47■□□□□ 0.87
LTBR-201ENST00000228918 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
LTBR-201ENST00000228918 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
LTBR-201ENST00000228918 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
LTBR-201ENST00000228918 ABCC4O15439 1325 aa20.46■□□□□ 0.87
LTBR-201ENST00000228918 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
LTBR-201ENST00000228918 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
LTBR-201ENST00000228918 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
LTBR-201ENST00000228918 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
LTBR-201ENST00000228918 RBM25P49756 843 aaKnown RBP20.44■□□□□ 0.86
LTBR-201ENST00000228918 GCC1Q96CN9 775 aa20.44■□□□□ 0.86
LTBR-201ENST00000228918 COG3Q96JB2 828 aa20.44■□□□□ 0.86
LTBR-201ENST00000228918 BMP2KLQ5H9B9 411 aa20.43■□□□□ 0.86
LTBR-201ENST00000228918 TXNDC2Q86VQ3 553 aa20.43■□□□□ 0.86
LTBR-201ENST00000228918 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
LTBR-201ENST00000228918 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
LTBR-201ENST00000228918 MLECQ14165 292 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 TWISTNBQ3B726 338 aaPredicted RBP20.42■□□□□ 0.86
LTBR-201ENST00000228918 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 SIRT1Q96EB6 747 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 C1orf115Q9H7X2 142 aa20.42■□□□□ 0.86
LTBR-201ENST00000228918 NCOA3Q9Y6Q9 1424 aa20.41■□□□□ 0.86
LTBR-201ENST00000228918 RRS1Q15050 365 aaKnown RBP20.41■□□□□ 0.86
LTBR-201ENST00000228918 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
LTBR-201ENST00000228918 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
LTBR-201ENST00000228918 MCM4P33991 863 aa20.39■□□□□ 0.86
LTBR-201ENST00000228918 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.86
LTBR-201ENST00000228918 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.86
LTBR-201ENST00000228918 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.85
LTBR-201ENST00000228918 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
LTBR-201ENST00000228918 SNX21Q969T3 373 aa20.38■□□□□ 0.85
LTBR-201ENST00000228918 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
LTBR-201ENST00000228918 API5Q9BZZ5 524 aaKnown RBP20.38■□□□□ 0.85
LTBR-201ENST00000228918 PRR36Q9H6K5 1346 aa20.37■□□□□ 0.85
LTBR-201ENST00000228918 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
LTBR-201ENST00000228918 TOPAZ1Q8N9V7 1692 aa20.36■□□□□ 0.85
LTBR-201ENST00000228918 DDIT3P35638 169 aa20.34■□□□□ 0.85
LTBR-201ENST00000228918 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
LTBR-201ENST00000228918 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
LTBR-201ENST00000228918 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
LTBR-201ENST00000228918 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.85
LTBR-201ENST00000228918 HDGFP51858 240 aaKnown RBP20.33■□□□□ 0.84
LTBR-201ENST00000228918 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 OVOS2A0A0J9YW53 1432 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 OVOS2Q6IE36 1432 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.32■□□□□ 0.84
LTBR-201ENST00000228918 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 KIF2CQ99661 725 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 RGPD1P0DJD0 1748 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
LTBR-201ENST00000228918 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
LTBR-201ENST00000228918 TNRQ92752 1358 aa20.31■□□□□ 0.84
LTBR-201ENST00000228918 PEAK1Q9H792 1746 aa20.31■□□□□ 0.84
LTBR-201ENST00000228918 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
LTBR-201ENST00000228918 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
LTBR-201ENST00000228918 RGS12O14924 1447 aa20.3■□□□□ 0.84
LTBR-201ENST00000228918 TTC21BQ7Z4L5 1316 aa20.3■□□□□ 0.84
LTBR-201ENST00000228918 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
LTBR-201ENST00000228918 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
LTBR-201ENST00000228918 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
LTBR-201ENST00000228918 ATP10DQ9P241 1426 aa20.28■□□□□ 0.84
LTBR-201ENST00000228918 FSD2A1L4K1 749 aa20.28■□□□□ 0.84
LTBR-201ENST00000228918 FAM43AQ8N2R8 423 aa20.28■□□□□ 0.84
LTBR-201ENST00000228918 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
LTBR-201ENST00000228918 CDC45O75419 566 aa20.27■□□□□ 0.84
LTBR-201ENST00000228918 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
LTBR-201ENST00000228918 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
LTBR-201ENST00000228918 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
LTBR-201ENST00000228918 CHL1O00533 1208 aa20.27■□□□□ 0.83
LTBR-201ENST00000228918 TRAK2O60296 914 aa20.27■□□□□ 0.83
LTBR-201ENST00000228918 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.83
LTBR-201ENST00000228918 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.83
LTBR-201ENST00000228918 USP6P35125 1406 aa20.26■□□□□ 0.83
LTBR-201ENST00000228918 ACEP12821 1306 aa20.26■□□□□ 0.83
LTBR-201ENST00000228918 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
LTBR-201ENST00000228918 KIF13AQ9H1H9 1805 aa20.26■□□□□ 0.83
LTBR-201ENST00000228918 EIF5BO60841 1220 aaKnown RBP20.25■□□□□ 0.83
LTBR-201ENST00000228918 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
LTBR-201ENST00000228918 PLEKHM2Q8IWE5 1019 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms