RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 PHACTR3Q96KR7 559 aa19.32■□□□□ 0.68
PXN-201ENST00000228307 ABCC3O15438 1527 aa19.32■□□□□ 0.68
PXN-201ENST00000228307 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
PXN-201ENST00000228307 MCM10Q7L590 875 aa19.32■□□□□ 0.68
PXN-201ENST00000228307 ACEP12821 1306 aa19.31■□□□□ 0.68
PXN-201ENST00000228307 ANKRD36BQ8N2N9 1353 aa19.31■□□□□ 0.68
PXN-201ENST00000228307 PIK3C2GO75747 1445 aa19.31■□□□□ 0.68
PXN-201ENST00000228307 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
PXN-201ENST00000228307 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
PXN-201ENST00000228307 ZMYND15Q9H091 742 aa19.31■□□□□ 0.68
PXN-201ENST00000228307 METP08581 1390 aa19.3■□□□□ 0.68
PXN-201ENST00000228307 NUCB2P80303 420 aa19.3■□□□□ 0.68
PXN-201ENST00000228307 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
PXN-201ENST00000228307 TET3O43151 1660 aa19.3■□□□□ 0.68
PXN-201ENST00000228307 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
PXN-201ENST00000228307 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
PXN-201ENST00000228307 ANTXR1Q9H6X2 564 aa19.29■□□□□ 0.68
PXN-201ENST00000228307 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
PXN-201ENST00000228307 MCCP23508 829 aa19.29■□□□□ 0.68
PXN-201ENST00000228307 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
PXN-201ENST00000228307 CIZ1Q9ULV3 898 aaPredicted RBP19.29■□□□□ 0.68
PXN-201ENST00000228307 FOXO3O43524 673 aa19.28■□□□□ 0.68
PXN-201ENST00000228307 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
PXN-201ENST00000228307 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
PXN-201ENST00000228307 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
PXN-201ENST00000228307 PPRC1Q5VV67 1664 aaKnown RBP19.27■□□□□ 0.68
PXN-201ENST00000228307 INSRP06213 1382 aa19.27■□□□□ 0.67
PXN-201ENST00000228307 KCNA6P17658 529 aa19.27■□□□□ 0.67
PXN-201ENST00000228307 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
PXN-201ENST00000228307 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
PXN-201ENST00000228307 TPM2P07951 284 aa19.26■□□□□ 0.67
PXN-201ENST00000228307 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
PXN-201ENST00000228307 ZSCAN30Q86W11 494 aa19.26■□□□□ 0.67
PXN-201ENST00000228307 GCC1Q96CN9 775 aa19.26■□□□□ 0.67
PXN-201ENST00000228307 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
PXN-201ENST00000228307 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
PXN-201ENST00000228307 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
PXN-201ENST00000228307 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
PXN-201ENST00000228307 INTS3Q68E01 1043 aaKnown RBP19.25■□□□□ 0.67
PXN-201ENST00000228307 KIF1BO60333 1816 aa19.25■□□□□ 0.67
PXN-201ENST00000228307 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
PXN-201ENST00000228307 MADDQ8WXG6 1647 aa19.24■□□□□ 0.67
PXN-201ENST00000228307 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
PXN-201ENST00000228307 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
PXN-201ENST00000228307 ANKLE2Q86XL3 938 aa19.23■□□□□ 0.67
PXN-201ENST00000228307 REC8O95072 547 aa19.23■□□□□ 0.67
PXN-201ENST00000228307 NEK4P51957 841 aa19.23■□□□□ 0.67
PXN-201ENST00000228307 TWISTNBQ3B726 338 aaPredicted RBP19.23■□□□□ 0.67
PXN-201ENST00000228307 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
PXN-201ENST00000228307 SYAP1Q96A49 352 aaPredicted RBP19.23■□□□□ 0.67
PXN-201ENST00000228307 RABEP1Q15276 862 aa19.22■□□□□ 0.67
PXN-201ENST00000228307 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
PXN-201ENST00000228307 GNAI1P63096 354 aa19.22■□□□□ 0.67
PXN-201ENST00000228307 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
PXN-201ENST00000228307 POLR3AO14802 1390 aaPredicted RBP19.22■□□□□ 0.67
PXN-201ENST00000228307 HMMRO75330 724 aa19.21■□□□□ 0.67
PXN-201ENST00000228307 BAG4O95429 457 aaKnown RBP19.21■□□□□ 0.67
PXN-201ENST00000228307 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
PXN-201ENST00000228307 ZNF692Q9BU19 519 aaPredicted RBP19.2■□□□□ 0.66
PXN-201ENST00000228307 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
PXN-201ENST00000228307 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
PXN-201ENST00000228307 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
PXN-201ENST00000228307 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
PXN-201ENST00000228307 MAP3K4Q9Y6R4 1608 aa19.2■□□□□ 0.66
PXN-201ENST00000228307 NUCB1Q02818 461 aa19.2■□□□□ 0.66
PXN-201ENST00000228307 FCHSD2O94868 740 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 OS9Q13438 667 aaPredicted RBP19.19■□□□□ 0.66
PXN-201ENST00000228307 GAS2L3Q86XJ1 694 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 SMC5Q8IY18 1101 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 SYCE3A1L190 88 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 HSPA2P54652 639 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 TSPYL4Q9UJ04 414 aa19.19■□□□□ 0.66
PXN-201ENST00000228307 KCNJ4P48050 445 aa19.18■□□□□ 0.66
PXN-201ENST00000228307 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
PXN-201ENST00000228307 LMOD3Q0VAK6 560 aa19.18■□□□□ 0.66
PXN-201ENST00000228307 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
PXN-201ENST00000228307 SMARCA5O60264 1052 aaPredicted RBP19.17■□□□□ 0.66
PXN-201ENST00000228307 CHAF1AQ13111 956 aaPredicted RBP19.17■□□□□ 0.66
PXN-201ENST00000228307 MYOM2P54296 1465 aa19.17■□□□□ 0.66
PXN-201ENST00000228307 NFE2L2Q16236 605 aa19.17■□□□□ 0.66
PXN-201ENST00000228307 DRC7Q8IY82 874 aa19.17■□□□□ 0.66
PXN-201ENST00000228307 ZBTB40Q9NUA8 1239 aa19.17■□□□□ 0.66
PXN-201ENST00000228307 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
PXN-201ENST00000228307 FSD2A1L4K1 749 aa19.16■□□□□ 0.66
PXN-201ENST00000228307 UQCRHLA0A096LP55 91 aa19.16■□□□□ 0.66
PXN-201ENST00000228307 UQCRHP07919 91 aa19.16■□□□□ 0.66
PXN-201ENST00000228307 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
PXN-201ENST00000228307 DIP2CQ9Y2E4 1556 aa19.16■□□□□ 0.66
PXN-201ENST00000228307 RAB3GAP1Q15042 981 aa19.16■□□□□ 0.66
PXN-201ENST00000228307 CHMP3Q9Y3E7 222 aa19.15■□□□□ 0.66
PXN-201ENST00000228307 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
PXN-201ENST00000228307 GOLGA6L4A6NEF3 574 aa19.14■□□□□ 0.66
PXN-201ENST00000228307 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
PXN-201ENST00000228307 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.65
PXN-201ENST00000228307 SNX21Q969T3 373 aa19.14■□□□□ 0.65
PXN-201ENST00000228307 TRIM35Q9UPQ4 493 aa19.14■□□□□ 0.65
PXN-201ENST00000228307 PRR36Q9H6K5 1346 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms