RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 TRIM5Q9C035 493 aa25.11■■□□□ 1.61
FMR1-201ENST00000218200 HDAC5Q9UQL6 1122 aa25.11■■□□□ 1.61
FMR1-201ENST00000218200 KDM5DQ9BY66 1539 aa25.09■■□□□ 1.61
FMR1-201ENST00000218200 CCDC39Q9UFE4 941 aa25.08■■□□□ 1.61
FMR1-201ENST00000218200 CCDC173Q0VFZ6 552 aa25.08■■□□□ 1.61
FMR1-201ENST00000218200 RABEP1Q15276 862 aa25.08■■□□□ 1.61
FMR1-201ENST00000218200 UPF3BQ9BZI7 483 aaKnown RBP25.08■■□□□ 1.61
FMR1-201ENST00000218200 SLC4A2P04920 1241 aa25.08■■□□□ 1.61
FMR1-201ENST00000218200 NCBP3Q53F19 620 aaKnown RBP25.08■■□□□ 1.61
FMR1-201ENST00000218200 PANK2Q9BZ23 570 aa25.08■■□□□ 1.61
FMR1-201ENST00000218200 SPINK5Q9NQ38 1064 aaPredicted RBP25.07■■□□□ 1.6
FMR1-201ENST00000218200 UBTFL1P0CB47 393 aaPredicted RBP25.07■■□□□ 1.6
FMR1-201ENST00000218200 BCORL1Q5H9F3 1711 aa25.07■■□□□ 1.6
FMR1-201ENST00000218200 SSH1Q8WYL5 1049 aa25.07■■□□□ 1.6
FMR1-201ENST00000218200 APPP05067 770 aa25.06■■□□□ 1.6
FMR1-201ENST00000218200 CPLX1O14810 134 aa25.06■■□□□ 1.6
FMR1-201ENST00000218200 NOC3LQ8WTT2 800 aaKnown RBP25.06■■□□□ 1.6
FMR1-201ENST00000218200 ATP10AO60312 1499 aa25.06■■□□□ 1.6
FMR1-201ENST00000218200 SYCE3A1L190 88 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 G3BP1Q13283 466 aaKnown RBP eCLIP25.05■■□□□ 1.6
FMR1-201ENST00000218200 GOLGA6L1Q8N7Z2 621 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 IL1RAPL2Q9NP60 686 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 TPM3P06753 285 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 RRS1Q15050 365 aaKnown RBP25.05■■□□□ 1.6
FMR1-201ENST00000218200 DDX54Q8TDD1 881 aaKnown RBP25.05■■□□□ 1.6
FMR1-201ENST00000218200 SDF4Q9BRK5 362 aa25.05■■□□□ 1.6
FMR1-201ENST00000218200 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
FMR1-201ENST00000218200 TSPY26PQ9H489 355 aa25.04■■□□□ 1.6
FMR1-201ENST00000218200 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 NEUROD6Q96NK8 337 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 NINLQ9Y2I6 1382 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 UQCRHLA0A096LP55 91 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 UQCRHP07919 91 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 SSFA2P28290 1259 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 DCTN1Q14203 1278 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 TPD52L1Q16890 204 aaPredicted RBP25.03■■□□□ 1.6
FMR1-201ENST00000218200 PRDM10Q9NQV6 1147 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 MBD3O95983 291 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 XPCQ01831 940 aaPredicted RBP25.03■■□□□ 1.6
FMR1-201ENST00000218200 SLC26A8Q96RN1 970 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 FBLN1P23142 703 aa25.03■■□□□ 1.6
FMR1-201ENST00000218200 SMARCA5O60264 1052 aaPredicted RBP25.02■■□□□ 1.6
FMR1-201ENST00000218200 FCHSD2O94868 740 aa25.02■■□□□ 1.6
FMR1-201ENST00000218200 STK3Q13188 491 aa25.02■■□□□ 1.6
FMR1-201ENST00000218200 MAPK8IP2Q13387 824 aaPredicted RBP25.02■■□□□ 1.6
FMR1-201ENST00000218200 C1orf141Q5JVX7 400 aa25.02■■□□□ 1.6
FMR1-201ENST00000218200 EXOC6BQ9Y2D4 811 aa25.02■■□□□ 1.6
FMR1-201ENST00000218200 STK11IPQ8N1F8 1099 aa25.02■■□□□ 1.6
FMR1-201ENST00000218200 NEXNQ0ZGT2 675 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 TPM2P07951 284 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 NUDT16Q96DE0 195 aaKnown RBP25.01■■□□□ 1.59
FMR1-201ENST00000218200 GCC1Q96CN9 775 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 CCDC61Q9Y6R9 512 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 MAGI2Q86UL8 1455 aa25.01■■□□□ 1.59
FMR1-201ENST00000218200 CT47B1P0C2W7 299 aaPredicted RBP25■■□□□ 1.59
FMR1-201ENST00000218200 ABCC1P33527 1531 aa25■■□□□ 1.59
FMR1-201ENST00000218200 LARP6Q9BRS8 491 aaKnown RBP25■■□□□ 1.59
FMR1-201ENST00000218200 ATP2B1P20020 1258 aa25■■□□□ 1.59
FMR1-201ENST00000218200 CFAP65Q6ZU64 1925 aaKnown RBP25■■□□□ 1.59
FMR1-201ENST00000218200 CCDC73Q6ZRK6 1079 aa25■■□□□ 1.59
FMR1-201ENST00000218200 POLR3AO14802 1390 aaPredicted RBP24.99■■□□□ 1.59
FMR1-201ENST00000218200 CCDC34Q96HJ3 373 aa24.99■■□□□ 1.59
FMR1-201ENST00000218200 GDPD2Q9HCC8 539 aa24.99■■□□□ 1.59
FMR1-201ENST00000218200 CROCC2H7BZ55 1655 aa24.99■■□□□ 1.59
FMR1-201ENST00000218200 FYB1O15117 783 aa24.99■■□□□ 1.59
FMR1-201ENST00000218200 RNF20Q5VTR2 975 aa24.98■■□□□ 1.59
FMR1-201ENST00000218200 NME9Q86XW9 330 aa24.98■■□□□ 1.59
FMR1-201ENST00000218200 TNPO1Q92973 898 aaKnown RBP24.98■■□□□ 1.59
FMR1-201ENST00000218200 ANKRD36BQ8N2N9 1353 aa24.98■■□□□ 1.59
FMR1-201ENST00000218200 FERMT3Q86UX7 667 aa24.98■■□□□ 1.59
FMR1-201ENST00000218200 CLASRPQ8N2M8 674 aaKnown RBP24.97■■□□□ 1.59
FMR1-201ENST00000218200 TNNQ9UQP3 1299 aa24.97■■□□□ 1.59
FMR1-201ENST00000218200 NPC1L1Q9UHC9 1359 aa24.97■■□□□ 1.59
FMR1-201ENST00000218200 EMILIN1Q9Y6C2 1016 aa24.97■■□□□ 1.59
FMR1-201ENST00000218200 TTLL5Q6EMB2 1281 aa24.96■■□□□ 1.59
FMR1-201ENST00000218200 FSD1Q9BTV5 496 aa24.96■■□□□ 1.59
FMR1-201ENST00000218200 ZNF692Q9BU19 519 aaPredicted RBP24.96■■□□□ 1.59
FMR1-201ENST00000218200 ZCCHC11Q5TAX3 1644 aaKnown RBP24.96■■□□□ 1.59
FMR1-201ENST00000218200 ERC2O15083 957 aa24.96■■□□□ 1.59
FMR1-201ENST00000218200 DMRT2Q9Y5R5 561 aa24.96■■□□□ 1.59
FMR1-201ENST00000218200 NLRP6P59044 892 aa24.95■■□□□ 1.59
FMR1-201ENST00000218200 NSD2O96028 1365 aa24.95■■□□□ 1.58
FMR1-201ENST00000218200 BLMP54132 1417 aaPredicted RBP24.94■■□□□ 1.58
FMR1-201ENST00000218200 SKIDA1Q1XH10 827 aa24.94■■□□□ 1.58
FMR1-201ENST00000218200 ZSCAN30Q86W11 494 aa24.94■■□□□ 1.58
FMR1-201ENST00000218200 PCDHB15Q9Y5E8 787 aa24.94■■□□□ 1.58
FMR1-201ENST00000218200 CDC42BPBQ9Y5S2 1711 aa24.94■■□□□ 1.58
FMR1-201ENST00000218200 MNS1Q8NEH6 495 aa24.93■■□□□ 1.58
FMR1-201ENST00000218200 NFE2L2Q16236 605 aa24.93■■□□□ 1.58
FMR1-201ENST00000218200 SIL1Q9H173 461 aa24.93■■□□□ 1.58
FMR1-201ENST00000218200 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.93■■□□□ 1.58
FMR1-201ENST00000218200 SEC24BO95487 1268 aa24.92■■□□□ 1.58
FMR1-201ENST00000218200 UGGT1Q9NYU2 1555 aa24.92■■□□□ 1.58
FMR1-201ENST00000218200 WASLO00401 505 aaPredicted RBP24.92■■□□□ 1.58
FMR1-201ENST00000218200 PDILTQ8N807 584 aa24.92■■□□□ 1.58
FMR1-201ENST00000218200 NPATQ14207 1427 aa24.91■■□□□ 1.58
FMR1-201ENST00000218200 XRCC6P12956 609 aaKnown RBP eCLIP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms