RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 PTPRCP08575 1304 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 UGGT2Q9NYU1 1516 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 ZRSR2Q15696 482 aaKnown RBP6.87□□□□□ -1.31
CBX5-201ENST00000209875 CD109Q6YHK3 1445 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 TUBB4AP04350 444 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 NASPP49321 788 aaPredicted RBP6.87□□□□□ -1.31
CBX5-201ENST00000209875 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 EIF2AK4Q9P2K8 1649 aaKnown RBP6.87□□□□□ -1.31
CBX5-201ENST00000209875 PLCH2O75038 1416 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 CLSTN1O94985 981 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 PRDM2Q13029 1718 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 CCDC158Q5M9N0 1113 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 IQCEQ6IPM2 695 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 RIC3Q7Z5B4 369 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 KLHL34Q8N239 644 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 TTC21AQ8NDW8 1320 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 HSP90AB3PQ58FF7 597 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 BABAM1Q9NWV8 329 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 SMARCE1Q969G3 411 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 PCF11O94913 1555 aaKnown RBP6.86□□□□□ -1.31
CBX5-201ENST00000209875 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 CFAP45Q9UL16 551 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 CBFA2T2O43439 604 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 LRRCC1Q9C099 1032 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 NKTRP30414 1462 aaKnown RBP6.86□□□□□ -1.31
CBX5-201ENST00000209875 PRKAR2BP31323 418 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 SLFN5Q08AF3 891 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 EIF3JO75822 258 aaKnown RBP6.86□□□□□ -1.31
CBX5-201ENST00000209875 KIF6Q6ZMV9 814 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
CBX5-201ENST00000209875 CYB5RLQ6IPT4 315 aa6.86□□□□□ -1.31
CBX5-201ENST00000209875 HOMEZQ8IX15 550 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 PHAXQ9H814 394 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 EPB41L2O43491 1005 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 FILIP1LQ4L180 1135 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 PPP4R3BQ5MIZ7 849 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 TRIM22Q8IYM9 498 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 BICD2Q8TD16 824 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 ZMYM3Q14202 1370 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 C14orf93Q9H972 538 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 PES1O00541 588 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 ERLIN1O75477 346 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 KINO60870 393 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 AKAP2Q9Y2D5 859 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 CYP46A1Q9Y6A2 500 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
CBX5-201ENST00000209875 RRP7AQ9Y3A4 280 aaKnown RBP6.85□□□□□ -1.31
CBX5-201ENST00000209875 MCM5P33992 734 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 ITSN2Q9NZM3 1697 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 DMRT2Q9Y5R5 561 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 NEMFO60524 1076 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 NEFHP12036 1026 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 TRAF1Q13077 416 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 ARID3AQ99856 593 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 GLRX3O76003 335 aaKnown RBP6.84□□□□□ -1.31
CBX5-201ENST00000209875 CCDC192P0DO97 292 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 FSD1Q9BTV5 496 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 GGNBP2Q9H3C7 697 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 CCDC9Q9Y3X0 531 aaKnown RBP6.84□□□□□ -1.31
CBX5-201ENST00000209875 ZNF518AQ6AHZ1 1483 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 KRT85P78386 507 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 RBM33Q96EV2 1170 aaKnown RBP6.84□□□□□ -1.31
CBX5-201ENST00000209875 PRAM1Q96QH2 718 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 NOL7Q9UMY1 257 aaKnown RBP6.84□□□□□ -1.31
CBX5-201ENST00000209875 CTDP1Q9Y5B0 961 aaPredicted RBP6.84□□□□□ -1.31
CBX5-201ENST00000209875 ZFYVE9O95405 1425 aa6.84□□□□□ -1.31
CBX5-201ENST00000209875 ABCC10Q5T3U5 1492 aa6.84□□□□□ -1.32
CBX5-201ENST00000209875 HDGFL1Q5TGJ6 251 aa6.84□□□□□ -1.32
CBX5-201ENST00000209875 CDK19Q9BWU1 502 aa6.84□□□□□ -1.32
CBX5-201ENST00000209875 ZNF330Q9Y3S2 320 aaPredicted RBP6.84□□□□□ -1.32
CBX5-201ENST00000209875 POLR3AO14802 1390 aaPredicted RBP6.84□□□□□ -1.32
CBX5-201ENST00000209875 PPIP5K1Q6PFW1 1433 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 CCDC196A0A1B0GTZ2 297 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
CBX5-201ENST00000209875 KIF20AO95235 890 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 CTAGE5O15320 804 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 EXOSC9Q06265 439 aaKnown RBP6.83□□□□□ -1.32
CBX5-201ENST00000209875 STIM1Q13586 685 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 SURF6O75683 361 aaKnown RBP6.83□□□□□ -1.32
CBX5-201ENST00000209875 DEF6Q9H4E7 631 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 NESP48681 1621 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 NFXL1Q6ZNB6 911 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 SCAND2PQ9GZW5 306 aaPredicted RBP6.83□□□□□ -1.32
CBX5-201ENST00000209875 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 PIK3C2GO75747 1445 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 CCDC57Q2TAC2 916 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 GPATCH8Q9UKJ3 1502 aaKnown RBP6.83□□□□□ -1.32
CBX5-201ENST00000209875 NBPF8Q3BBV2 869 aa6.83□□□□□ -1.32
CBX5-201ENST00000209875 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
CBX5-201ENST00000209875 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
CBX5-201ENST00000209875 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
CBX5-201ENST00000209875 LTV1Q96GA3 475 aaPredicted RBP6.82□□□□□ -1.32
CBX5-201ENST00000209875 GOLGA6L10A6NI86 522 aa6.82□□□□□ -1.32
CBX5-201ENST00000209875 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
CBX5-201ENST00000209875 ABTB2Q8N961 1025 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms