RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 GOLGA6L22H0YM25 854 aa24.5■■□□□ 1.51
HOXA11-201ENST00000006015 OFD1O75665 1012 aa24.5■■□□□ 1.51
HOXA11-201ENST00000006015 TERF1P54274 439 aa24.5■■□□□ 1.51
HOXA11-201ENST00000006015 ARHGEF40Q8TER5 1519 aa24.5■■□□□ 1.51
HOXA11-201ENST00000006015 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.49■■□□□ 1.51
HOXA11-201ENST00000006015 NUCB1Q02818 461 aa24.49■■□□□ 1.51
HOXA11-201ENST00000006015 ATF7IPQ6VMQ6 1270 aa24.49■■□□□ 1.51
HOXA11-201ENST00000006015 CLEC17AQ6ZS10 378 aa24.47■■□□□ 1.51
HOXA11-201ENST00000006015 PLEKHF1Q96S99 279 aa24.47■■□□□ 1.51
HOXA11-201ENST00000006015 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
HOXA11-201ENST00000006015 MSNP26038 577 aaKnown RBP24.46■■□□□ 1.51
HOXA11-201ENST00000006015 TXNDC2Q86VQ3 553 aa24.46■■□□□ 1.51
HOXA11-201ENST00000006015 TSR2Q969E8 191 aaKnown RBP24.46■■□□□ 1.51
HOXA11-201ENST00000006015 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
HOXA11-201ENST00000006015 K7ELQ4 463 aaPredicted RBP24.46■■□□□ 1.51
HOXA11-201ENST00000006015 KLHL40Q2TBA0 621 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 BMP2KLQ5H9B9 411 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 ZBTB40Q9NUA8 1239 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 KIF2CQ99661 725 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.5
HOXA11-201ENST00000006015 KIF16BQ96L93 1317 aa24.44■■□□□ 1.5
HOXA11-201ENST00000006015 METP08581 1390 aa24.44■■□□□ 1.5
HOXA11-201ENST00000006015 EXOSC9Q06265 439 aaKnown RBP24.44■■□□□ 1.5
HOXA11-201ENST00000006015 SSH1Q8WYL5 1049 aa24.44■■□□□ 1.5
HOXA11-201ENST00000006015 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
HOXA11-201ENST00000006015 CALD1Q05682 793 aaKnown RBP24.42■■□□□ 1.5
HOXA11-201ENST00000006015 HS1BP3Q53T59 392 aa24.42■■□□□ 1.5
HOXA11-201ENST00000006015 CHD1LQ86WJ1 897 aa24.42■■□□□ 1.5
HOXA11-201ENST00000006015 COL3A1P02461 1466 aaPredicted RBP24.42■■□□□ 1.5
HOXA11-201ENST00000006015 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
HOXA11-201ENST00000006015 LNPKQ9C0E8 428 aa24.41■■□□□ 1.5
HOXA11-201ENST00000006015 TRIM35Q9UPQ4 493 aa24.41■■□□□ 1.5
HOXA11-201ENST00000006015 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
HOXA11-201ENST00000006015 SSFA2P28290 1259 aa24.4■■□□□ 1.5
HOXA11-201ENST00000006015 MAP7D2Q96T17 732 aa24.4■■□□□ 1.5
HOXA11-201ENST00000006015 NOB1Q9ULX3 412 aaKnown RBP24.4■■□□□ 1.5
HOXA11-201ENST00000006015 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
HOXA11-201ENST00000006015 DDX49Q9Y6V7 483 aaKnown RBP24.4■■□□□ 1.5
HOXA11-201ENST00000006015 CD2BP2O95400 341 aaKnown RBP24.38■■□□□ 1.49
HOXA11-201ENST00000006015 IPO8O15397 1037 aaKnown RBP24.38■■□□□ 1.49
HOXA11-201ENST00000006015 ZNF445P59923 1031 aa24.38■■□□□ 1.49
HOXA11-201ENST00000006015 IL16Q14005 1332 aa24.38■■□□□ 1.49
HOXA11-201ENST00000006015 BAG4O95429 457 aaKnown RBP24.37■■□□□ 1.49
HOXA11-201ENST00000006015 FOXD4L1Q9NU39 408 aa24.37■■□□□ 1.49
HOXA11-201ENST00000006015 WASLO00401 505 aaPredicted RBP24.37■■□□□ 1.49
HOXA11-201ENST00000006015 RIPK4P57078 832 aa24.37■■□□□ 1.49
HOXA11-201ENST00000006015 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
HOXA11-201ENST00000006015 NME9Q86XW9 330 aa24.35■■□□□ 1.49
HOXA11-201ENST00000006015 GAS2L2Q8NHY3 880 aa24.35■■□□□ 1.49
HOXA11-201ENST00000006015 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
HOXA11-201ENST00000006015 MED14O60244 1454 aa24.35■■□□□ 1.49
HOXA11-201ENST00000006015 KIF13AQ9H1H9 1805 aa24.34■■□□□ 1.49
HOXA11-201ENST00000006015 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.49
HOXA11-201ENST00000006015 EMILIN1Q9Y6C2 1016 aa24.33■■□□□ 1.49
HOXA11-201ENST00000006015 PNPLA6Q8IY17 1366 aa24.33■■□□□ 1.49
HOXA11-201ENST00000006015 NRXN3Q9Y4C0 1643 aa24.33■■□□□ 1.49
HOXA11-201ENST00000006015 DLC1Q96QB1 1528 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 ZNF500O60304 480 aaPredicted RBP24.32■■□□□ 1.48
HOXA11-201ENST00000006015 HMOX1P09601 288 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 PLPPR3Q6T4P5 718 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 TBC1D9Q6ZT07 1266 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 GCC1Q96CN9 775 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 NUDT16Q96DE0 195 aaKnown RBP24.32■■□□□ 1.48
HOXA11-201ENST00000006015 NOL7Q9UMY1 257 aaKnown RBP24.32■■□□□ 1.48
HOXA11-201ENST00000006015 PPIP5K1Q6PFW1 1433 aa24.32■■□□□ 1.48
HOXA11-201ENST00000006015 ANKRD26Q9UPS8 1709 aa24.31■■□□□ 1.48
HOXA11-201ENST00000006015 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
HOXA11-201ENST00000006015 CEBPAP49715 358 aaPredicted RBP24.3■■□□□ 1.48
HOXA11-201ENST00000006015 ALDH1L2Q3SY69 923 aa24.3■■□□□ 1.48
HOXA11-201ENST00000006015 PDLIM2Q96JY6 352 aa24.3■■□□□ 1.48
HOXA11-201ENST00000006015 TNRQ92752 1358 aa24.29■■□□□ 1.48
HOXA11-201ENST00000006015 NUTM2FA1L443 756 aa24.29■■□□□ 1.48
HOXA11-201ENST00000006015 NUCB2P80303 420 aa24.29■■□□□ 1.48
HOXA11-201ENST00000006015 RBM42Q9BTD8 480 aaKnown RBP24.29■■□□□ 1.48
HOXA11-201ENST00000006015 R3HCC1Q9Y3T6 440 aaKnown RBP24.29■■□□□ 1.48
HOXA11-201ENST00000006015 PHACTR3Q96KR7 559 aa24.28■■□□□ 1.48
HOXA11-201ENST00000006015 RBM10P98175 930 aaKnown RBP24.28■■□□□ 1.48
HOXA11-201ENST00000006015 ZSCAN23Q3MJ62 389 aa24.28■■□□□ 1.48
HOXA11-201ENST00000006015 ANKRD45Q5TZF3 282 aa24.28■■□□□ 1.48
HOXA11-201ENST00000006015 CHMP4BQ9H444 224 aaKnown RBP24.28■■□□□ 1.48
HOXA11-201ENST00000006015 KIF20BQ96Q89 1820 aa24.27■■□□□ 1.48
HOXA11-201ENST00000006015 ATP7BP35670 1465 aa24.27■■□□□ 1.48
HOXA11-201ENST00000006015 RRS1Q15050 365 aaKnown RBP24.27■■□□□ 1.48
HOXA11-201ENST00000006015 CDC45O75419 566 aa24.26■■□□□ 1.47
HOXA11-201ENST00000006015 MTERF4Q7Z6M4 381 aaKnown RBP24.26■■□□□ 1.47
HOXA11-201ENST00000006015 FCHSD2O94868 740 aa24.26■■□□□ 1.47
HOXA11-201ENST00000006015 RABEP1Q15276 862 aa24.26■■□□□ 1.47
HOXA11-201ENST00000006015 MCTP1Q6DN14 999 aa24.26■■□□□ 1.47
HOXA11-201ENST00000006015 CAVIN1Q6NZI2 390 aaKnown RBP24.26■■□□□ 1.47
HOXA11-201ENST00000006015 CSPP1Q1MSJ5 1256 aa24.25■■□□□ 1.47
HOXA11-201ENST00000006015 THUMPD2Q9BTF0 503 aaKnown RBP24.25■■□□□ 1.47
HOXA11-201ENST00000006015 CPSF1Q10570 1443 aaKnown RBP24.25■■□□□ 1.47
HOXA11-201ENST00000006015 LTKP29376 864 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 MCM5P33992 734 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 FAM13BQ9NYF5 915 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 AK9Q5TCS8 1911 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 CFAP44Q96MT7 982 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 LMBRD1Q9NUN5 540 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms