RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Zeb2Q9R0G7 1215 aa12.59□□□□□ -0.39
Usp47-206ENSMUST00000215510 Prkar2bP31324 416 aa12.59□□□□□ -0.39
Usp47-206ENSMUST00000215510 Fkbp5Q64378 456 aa12.59□□□□□ -0.39
Usp47-206ENSMUST00000215510 Nol11Q8BJW5 723 aaKnown RBP12.59□□□□□ -0.39
Usp47-206ENSMUST00000215510 Q3UPC7 1272 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 VeztQ3ZK22 780 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 CarsQ9ER72 831 aaKnown RBP12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Tmc1Q8R4P5 757 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 MvpQ9EQK5 861 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Evc2Q8K1G2 1220 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Slc5a4bQ91ZP4 660 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Gcc1Q9D4H2 778 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Pde4bB1AWC9 736 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Trim34bJ3QNR8 485 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Aldh1l1Q8R0Y6 902 aa12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Hnrnpul1Q8VDM6 859 aaKnown RBP12.58□□□□□ -0.4
Usp47-206ENSMUST00000215510 Chpf2Q3UU43 768 aa12.57□□□□□ -0.4
Usp47-206ENSMUST00000215510 Amotl2Q8K371 772 aa12.57□□□□□ -0.4
Usp47-206ENSMUST00000215510 Kif21aQ9QXL2 1672 aa12.57□□□□□ -0.4
Usp47-206ENSMUST00000215510 Frmpd2A0A140LI67 1392 aa12.57□□□□□ -0.4
Usp47-206ENSMUST00000215510 Rrs1Q9CYH6 365 aaKnown RBP12.57□□□□□ -0.4
Usp47-206ENSMUST00000215510 Dnajc2P54103 621 aaKnown RBP12.56□□□□□ -0.4
Usp47-206ENSMUST00000215510 Adgrb2Q8CGM1 1561 aa12.56□□□□□ -0.4
Usp47-206ENSMUST00000215510 Q9D9S1 216 aa12.56□□□□□ -0.4
Usp47-206ENSMUST00000215510 Gtf2f1Q3THK3 508 aaKnown RBP12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Rnf214Q8BFU3 668 aaKnown RBP12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Rec8Q8C5S7 591 aa12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 DroshaQ5HZJ0 1373 aaKnown RBP12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 EappQ5BU09 281 aa12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Elp1Q7TT37 1333 aaKnown RBP12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Ints3Q7TPD0 1041 aaKnown RBP12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Slc26a8Q8R0C3 999 aa12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Ppp1r42Q8R1Z4 357 aa12.55□□□□□ -0.4
Usp47-206ENSMUST00000215510 Eif3aP23116 1344 aaKnown RBP12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Wdr7Q920I9 1489 aa12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 GpkowQ56A08 488 aa12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Psma5Q9Z2U1 241 aaKnown RBP12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Tfip11Q9ERA6 838 aaKnown RBP12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Srek1Q8BZX4 494 aaKnown RBP12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Cchcr1Q8K2I2 770 aa12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Nlrp3Q8R4B8 1033 aa12.54□□□□□ -0.4
Usp47-206ENSMUST00000215510 Arhgef40Q3UPH7 1517 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Sos1Q62245 1319 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 RalgapbQ8BQZ4 1484 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 RdxP26043 583 aaKnown RBP12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 TbcaP48428 108 aaKnown RBP12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Ptpdc1Q6NZK8 747 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Soga3Q6NZL0 945 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 UvssaQ9D479 717 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Bcl11aQ9QYE3 773 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Prl7d1P04769 244 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Klc3Q91W40 508 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Nup160Q9Z0W3 1402 aaKnown RBP12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Magi3Q9EQJ9 1476 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Cfap99A0A140LIX9 648 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Odf2lQ9D478 642 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Dnajc10Q9DC23 793 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Naip7Q9JIB3 1402 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Naip6Q9JIB6 1403 aa12.53□□□□□ -0.4
Usp47-206ENSMUST00000215510 Cspp1B2RX88 1205 aa12.52□□□□□ -0.4
Usp47-206ENSMUST00000215510 MsnP26041 577 aaKnown RBP12.52□□□□□ -0.4
Usp47-206ENSMUST00000215510 OptnQ8K3K8 584 aa12.52□□□□□ -0.4
Usp47-206ENSMUST00000215510 Ltv1Q6NSQ7 470 aaKnown RBP12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Kdm4aQ8BW72 1064 aa12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Gripap1Q8VD04 806 aa12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Top1mtQ8R4U6 593 aa12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Znf518aB2RRF6 1478 aaKnown RBP12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Exoc5Q3TPX4 708 aa12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 1700010I14RikQ7TPG0 532 aa12.52□□□□□ -0.41
Usp47-206ENSMUST00000215510 Tom1O88746 492 aa12.51□□□□□ -0.41
Usp47-206ENSMUST00000215510 Uspl1Q3ULM6 1089 aa12.51□□□□□ -0.41
Usp47-206ENSMUST00000215510 TnnQ80Z71 1560 aa12.51□□□□□ -0.41
Usp47-206ENSMUST00000215510 Samd1D3YXK1 519 aa12.51□□□□□ -0.41
Usp47-206ENSMUST00000215510 CastP51125 788 aa12.51□□□□□ -0.41
Usp47-206ENSMUST00000215510 Jmjd4Q8BFT6 427 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Ehmt1Q5DW34 1296 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Glipr1l2Q9CQ35 332 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Kif4P33174 1231 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Gabpb2P81069 414 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Brf1Q8CFK2 676 aa12.5□□□□□ -0.41
Usp47-206ENSMUST00000215510 Fam83gQ5SWY7 812 aa12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Gsdma2Q32M21 443 aa12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Nsfl1cQ9CZ44 370 aaKnown RBP12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Zap70P43404 618 aa12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Kiaa0754Q69ZZ9 979 aa12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Fnbp4Q6ZQ03 1031 aa12.49□□□□□ -0.41
Usp47-206ENSMUST00000215510 Eif4a2P10630 407 aa12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Prim1P20664 417 aa12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Tpm3P21107 285 aaKnown RBP12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Slf2Q6P9P0 1278 aa12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Ppip5k2Q6ZQB6 1129 aa12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Gpatch3Q8BIY1 525 aa12.48□□□□□ -0.41
Usp47-206ENSMUST00000215510 Myd88P22366 296 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Kif20aP97329 887 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Igflr1Q3U4N7 345 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Dennd4bQ3U1Y4 1499 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Map3k2Q61083 619 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Spty2d1Q68FG3 682 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 GptQ8QZR5 496 aa12.47□□□□□ -0.41
Usp47-206ENSMUST00000215510 Irgm2A0A140LIF8 407 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 73.9 ms