RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Rhox8Q6VSS7 320 aa19.22■□□□□ 0.67
Usp47-206ENSMUST00000215510 Ccdc136Q3TVA9 1136 aa17.26■□□□□ 0.35
Usp47-206ENSMUST00000215510 NischQ80TM9 1593 aa17.17■□□□□ 0.34
Usp47-206ENSMUST00000215510 Ehmt2Q9Z148 1263 aaKnown RBP17.08■□□□□ 0.32
Usp47-206ENSMUST00000215510 Esf1Q3V1V3 845 aaKnown RBP16.96■□□□□ 0.31
Usp47-206ENSMUST00000215510 Cngb1E1AZ71 1325 aa16.9■□□□□ 0.3
Usp47-206ENSMUST00000215510 Gab3Q8BSM5 595 aa16.74■□□□□ 0.27
Usp47-206ENSMUST00000215510 Trim41Q5NCC3 630 aa16.64■□□□□ 0.25
Usp47-206ENSMUST00000215510 Zeb1Q64318 1117 aa16.52■□□□□ 0.24
Usp47-206ENSMUST00000215510 Npm2Q80W85 207 aa16.44■□□□□ 0.22
Usp47-206ENSMUST00000215510 Myt1lP97500 1187 aa16.42■□□□□ 0.22
Usp47-206ENSMUST00000215510 Rpgrip1Q9EPQ2 1331 aa16.34■□□□□ 0.21
Usp47-206ENSMUST00000215510 Abcc9P70170 1546 aa16.32■□□□□ 0.2
Usp47-206ENSMUST00000215510 Ube2uB1AUC4 352 aa16.3■□□□□ 0.2
Usp47-206ENSMUST00000215510 Wdr66E9Q743 1299 aa16.16■□□□□ 0.18
Usp47-206ENSMUST00000215510 Il27Q8K3I6 234 aa16.13■□□□□ 0.17
Usp47-206ENSMUST00000215510 Gm35339A0A140LHH9 1649 aa16.12■□□□□ 0.17
Usp47-206ENSMUST00000215510 Las1lA2BE28 776 aaKnown RBP16.04■□□□□ 0.16
Usp47-206ENSMUST00000215510 Zcchc6Q5BLK4 1491 aaKnown RBP16■□□□□ 0.15
Usp47-206ENSMUST00000215510 UbtfP25976 765 aaKnown RBP15.96■□□□□ 0.15
Usp47-206ENSMUST00000215510 HrcG5E8J6 738 aa15.75■□□□□ 0.11
Usp47-206ENSMUST00000215510 Abcc8B2RUS7 1588 aa15.75■□□□□ 0.11
Usp47-206ENSMUST00000215510 Ap3b1Q9Z1T1 1105 aa15.69■□□□□ 0.1
Usp47-206ENSMUST00000215510 Acin1Q9JIX8 1338 aaKnown RBP15.63■□□□□ 0.09
Usp47-206ENSMUST00000215510 Ccdc180J3QNE4 1664 aa15.55■□□□□ 0.08
Usp47-206ENSMUST00000215510 Fam50aQ9WV03 339 aaKnown RBP15.52■□□□□ 0.07
Usp47-206ENSMUST00000215510 NefmP08553 848 aa15.51■□□□□ 0.07
Usp47-206ENSMUST00000215510 Slc24a1Q91WD8 1130 aa15.43■□□□□ 0.06
Usp47-206ENSMUST00000215510 Npm1Q61937 292 aaKnown RBP15.41■□□□□ 0.06
Usp47-206ENSMUST00000215510 Neurod1Q60867 357 aa15.37■□□□□ 0.05
Usp47-206ENSMUST00000215510 Ppargc1bQ8VHJ7 1014 aa15.37■□□□□ 0.05
Usp47-206ENSMUST00000215510 Lmod2Q3UHZ5 550 aa15.32■□□□□ 0.04
Usp47-206ENSMUST00000215510 Rtl1Q7M732 1744 aa15.26■□□□□ 0.03
Usp47-206ENSMUST00000215510 Plekhg3Q4VAC9 1341 aa15.25■□□□□ 0.03
Usp47-206ENSMUST00000215510 Zbtb7cQ8VCZ7 619 aa15.22■□□□□ 0.03
Usp47-206ENSMUST00000215510 Chic1Q8CBW7 227 aa15.2■□□□□ 0.02
Usp47-206ENSMUST00000215510 Ifnlr1Q8CGK5 535 aa15.2■□□□□ 0.02
Usp47-206ENSMUST00000215510 NclP09405 707 aaKnown RBP15.2■□□□□ 0.02
Usp47-206ENSMUST00000215510 Mier1Q5UAK0 511 aa15.14■□□□□ 0.01
Usp47-206ENSMUST00000215510 Os9Q8K2C7 672 aa15.12■□□□□ 0.01
Usp47-206ENSMUST00000215510 Ubl4bQ9CQ84 188 aa15.1■□□□□ 0.01
Usp47-206ENSMUST00000215510 Fkbp15Q6P9Q6 1216 aaKnown RBP15.08■□□□□ 0.01
Usp47-206ENSMUST00000215510 Brd4Q9ESU6 1400 aaKnown RBP15.08■□□□□ 0.01
Usp47-206ENSMUST00000215510 Pcgf6Q99NA9 353 aa15.07■□□□□ 0
Usp47-206ENSMUST00000215510 Rb1cc1Q9ESK9 1588 aa15.06■□□□□ 0
Usp47-206ENSMUST00000215510 Hnrnpul2Q00PI9 745 aaKnown RBP15.03■□□□□ -0
Usp47-206ENSMUST00000215510 Stra8P70278 393 aa15.02□□□□□ -0.01
Usp47-206ENSMUST00000215510 TonslQ6NZL6 1363 aa15.01□□□□□ -0.01
Usp47-206ENSMUST00000215510 Cdk11bP24788 784 aaKnown RBP15.01□□□□□ -0.01
Usp47-206ENSMUST00000215510 Supt5hO55201 1082 aaKnown RBP14.98□□□□□ -0.01
Usp47-206ENSMUST00000215510 Eid3Q3V124 375 aa14.97□□□□□ -0.01
Usp47-206ENSMUST00000215510 Pelp1Q9DBD5 1123 aaKnown RBP14.96□□□□□ -0.01
Usp47-206ENSMUST00000215510 Dcaf1Q80TR8 1506 aa14.95□□□□□ -0.02
Usp47-206ENSMUST00000215510 NrdcQ8BHG1 1161 aa14.95□□□□□ -0.02
Usp47-206ENSMUST00000215510 Nop58Q6DFW4 536 aaKnown RBP14.93□□□□□ -0.02
Usp47-206ENSMUST00000215510 Zbtb4Q5F293 982 aa14.92□□□□□ -0.02
Usp47-206ENSMUST00000215510 NacadQ5SWP3 1504 aa14.91□□□□□ -0.02
Usp47-206ENSMUST00000215510 Clip1Q922J3 1391 aa14.89□□□□□ -0.03
Usp47-206ENSMUST00000215510 Eif5bQ05D44 1216 aaKnown RBP14.88□□□□□ -0.03
Usp47-206ENSMUST00000215510 Anp32bQ9EST5 272 aaKnown RBP14.88□□□□□ -0.03
Usp47-206ENSMUST00000215510 Mapk8ip2Q9ERE9 830 aa14.85□□□□□ -0.03
Usp47-206ENSMUST00000215510 Plppr3Q7TPB0 716 aa14.84□□□□□ -0.03
Usp47-206ENSMUST00000215510 CenpbP27790 599 aa14.83□□□□□ -0.04
Usp47-206ENSMUST00000215510 Erich6D3Z6S9 713 aa14.82□□□□□ -0.04
Usp47-206ENSMUST00000215510 Cep164Q5DU05 1446 aa14.82□□□□□ -0.04
Usp47-206ENSMUST00000215510 Gm13697A2AK42 830 aa14.81□□□□□ -0.04
Usp47-206ENSMUST00000215510 Prdm10Q3UTQ7 1184 aa14.74□□□□□ -0.05
Usp47-206ENSMUST00000215510 Chic2Q9D9G3 165 aa14.73□□□□□ -0.05
Usp47-206ENSMUST00000215510 Atp1b4Q99ME6 356 aa14.7□□□□□ -0.06
Usp47-206ENSMUST00000215510 Kif15Q6P9L6 1387 aa14.69□□□□□ -0.06
Usp47-206ENSMUST00000215510 Baz1aO88379 1555 aa14.68□□□□□ -0.06
Usp47-206ENSMUST00000215510 Kdm5dQ62240 1548 aa14.65□□□□□ -0.06
Usp47-206ENSMUST00000215510 BlmO88700 1416 aa14.62□□□□□ -0.07
Usp47-206ENSMUST00000215510 Ttbk1Q6PCN3 1308 aa14.62□□□□□ -0.07
Usp47-206ENSMUST00000215510 NeflP08551 543 aa14.59□□□□□ -0.07
Usp47-206ENSMUST00000215510 Rsf1E9PWW9 1441 aaKnown RBP14.58□□□□□ -0.08
Usp47-206ENSMUST00000215510 Golga3P55937 1487 aa14.58□□□□□ -0.08
Usp47-206ENSMUST00000215510 ClspnQ80YR7 1315 aa14.58□□□□□ -0.08
Usp47-206ENSMUST00000215510 Setd5Q5XJV7 1441 aa14.57□□□□□ -0.08
Usp47-206ENSMUST00000215510 Gm13695A2AK44 830 aa14.56□□□□□ -0.08
Usp47-206ENSMUST00000215510 Tnnt3Q9QZ47 272 aa14.55□□□□□ -0.08
Usp47-206ENSMUST00000215510 Sall2Q9QX96 1004 aa14.55□□□□□ -0.08
Usp47-206ENSMUST00000215510 Ercc6F8VPZ5 1481 aa14.47□□□□□ -0.09
Usp47-206ENSMUST00000215510 Arhgap27A2AB59 869 aa14.45□□□□□ -0.1
Usp47-206ENSMUST00000215510 Ccer2J3QPU5 274 aa14.43□□□□□ -0.1
Usp47-206ENSMUST00000215510 Amer1Q7TS75 1132 aa14.42□□□□□ -0.1
Usp47-206ENSMUST00000215510 Nlrp6Q91WS2 869 aa14.42□□□□□ -0.1
Usp47-206ENSMUST00000215510 Ccdc18Q640L5 1455 aa14.38□□□□□ -0.11
Usp47-206ENSMUST00000215510 Polr3glQ8R0C0 218 aa14.37□□□□□ -0.11
Usp47-206ENSMUST00000215510 Rgl3Q3UYI5 709 aa14.34□□□□□ -0.11
Usp47-206ENSMUST00000215510 Ccdc88bQ4QRL3 1481 aa14.31□□□□□ -0.12
Usp47-206ENSMUST00000215510 Safb2Q80YR5 991 aaKnown RBP14.31□□□□□ -0.12
Usp47-206ENSMUST00000215510 Rangap1P46061 589 aaKnown RBP14.3□□□□□ -0.12
Usp47-206ENSMUST00000215510 Eea1Q8BL66 1411 aa14.3□□□□□ -0.12
Usp47-206ENSMUST00000215510 Gm38655A0A286YDK6 273 aa14.3□□□□□ -0.12
Usp47-206ENSMUST00000215510 P3h3Q8CG70 732 aa14.29□□□□□ -0.12
Usp47-206ENSMUST00000215510 Clstn2Q9ER65 966 aa14.29□□□□□ -0.12
Usp47-206ENSMUST00000215510 Pds5bQ4VA53 1446 aaKnown RBP14.29□□□□□ -0.12
Usp47-206ENSMUST00000215510 Hdac5Q9Z2V6 1113 aa14.28□□□□□ -0.12
Usp47-206ENSMUST00000215510 Csrnp3P59055 597 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms