RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Nat10Q8K224 1024 aaKnown RBP13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Phldb2Q8K1N2 1249 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Plekhd1B2RPU2 505 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gigyf1Q99MR1 1044 aaKnown RBP13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm21680A0A0G2JGR8 267 aa13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cdc37l1Q9CZP7 335 aa13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Vps8Q0P5W1 1427 aa13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Atad2bE9Q166 1460 aaKnown RBP13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ccdc181Q80ZU5 509 aa13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Fsd2Q8BZ52 692 aa13.9□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Smarca4Q3TKT4 1613 aaKnown RBP13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 CastP51125 788 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cdkl5Q3UTQ8 938 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ncbp1Q3UYV9 790 aaKnown RBP13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Gimap6Q8K349 305 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Kif18aQ91WD7 886 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ggnbp2Q5SV77 696 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Galntl5Q9D4M9 431 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Lrrfip2Q91WK0 415 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Pms1Q8K119 917 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Trim34aQ99PP6 485 aa13.89□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cfap69Q8BH53 942 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 CenpqQ9CPQ5 267 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Slc4a2P13808 1237 aaKnown RBP13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Mipol1Q9D9F8 279 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Krt84Q99M73 603 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Rapgef4Q9EQZ6 1011 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Washc2Q6PGL7 1334 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Polr1aO35134 1717 aaKnown RBP13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Dusp27Q148W8 1138 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Nup88Q8CEC0 753 aaKnown RBP13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Flad1Q8R123 492 aa13.88□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Adck5Q80V03 582 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Sugp2Q8CH09 1067 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cep57l1Q8VDS7 400 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 CalrP14211 416 aaKnown RBP13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Iqca1Q9CUL5 857 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Pmfbp1Q9WVQ0 1022 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Kif20aP97329 887 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Samm50Q8BGH2 469 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 PalmQ9Z0P4 383 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Gsdma2Q32M21 443 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Btbd11Q6GQW0 1109 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Gps2Q921N8 327 aa13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Gnl2Q99LH1 728 aaKnown RBP13.87□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cfap58B2RW38 873 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Top1mtQ8R4U6 593 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cttnbp2B9EJA2 1648 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ccdc178Q8CDV0 866 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Rufy2Q8R4C2 606 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 PrkcshO08795 521 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Fez1Q8K0X8 392 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Pde4bB1AWC9 736 aa13.86□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Lmbr1Q9JIT0 490 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Fam13aQ8BGI4 693 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Slu7Q8BHJ9 585 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 TkfcQ8VC30 578 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cfap45Q9D9U9 551 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 CarsQ9ER72 831 aaKnown RBP13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Znf710Q3U288 666 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Nup133Q8R0G9 1155 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Med4Q9CQA5 270 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ccdc39Q9D5Y1 937 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Map9Q3TRR0 646 aa13.85□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Bicdl1A0JNT9 577 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 4930572O03RikQ8C5Y0 211 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ptpdc1Q6NZK8 747 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Myom3A2ABU4 1439 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ppp6r1Q7TSI3 856 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 TxlnbQ8VBT1 685 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ppm1eQ80TL0 749 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 ImmtQ8CAQ8 757 aaKnown RBP13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cep131Q62036 1060 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Ssh1Q76I79 1042 aa13.84□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Wasf1Q8R5H6 559 aa13.83□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Cdca7Q9D0M2 382 aa13.83□□□□□ -0.19
Scn8a-208ENSMUST00000200963 MvpQ9EQK5 861 aa13.83□□□□□ -0.19
Scn8a-208ENSMUST00000200963 Irgm2A0A140LIF8 407 aa13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Sptbn5F6UCX4 1208 aa13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Kcnn1Q9EQR3 537 aa13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Vps37dQ810I0 261 aa13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 BbxQ8VBW5 907 aa13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Rrp9Q91WM3 475 aaKnown RBP13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Rrs1Q9CYH6 365 aaKnown RBP13.83□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Ift57Q8BXG3 429 aa13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 AidaQ8C4Q6 305 aa13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Pafah1b1P63005 410 aaKnown RBP13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Cpa2Q504N0 417 aa13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Brf1Q8CFK2 676 aa13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 ApobrQ8VBT6 942 aa13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 NgdnQ9DB96 315 aaKnown RBP13.82□□□□□ -0.2
Scn8a-208ENSMUST00000200963 EappQ5BU09 281 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Fkbp5Q64378 456 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Arhgef18Q6P9R4 1021 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Trim55G3X8Y1 545 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Smarca2Q6DIC0 1577 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Lrrfip1Q3UZ39 729 aaKnown RBP13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Ankib1Q6ZPS6 1085 aa13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 Tfip11Q9ERA6 838 aaKnown RBP13.81□□□□□ -0.2
Scn8a-208ENSMUST00000200963 TxlnaQ6PAM1 554 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 90.9 ms