RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Ttc21bQ0HA38 1315 aa21.37■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Kif18aQ91WD7 886 aa21.37■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Sall3Q62255 1320 aa21.37■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Strn4P58404 760 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Rhot2Q8JZN7 620 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 PrxO55103 1391 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Acsbg1Q99PU5 721 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Rufy1Q8BIJ7 712 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Fkbp5Q64378 456 aa21.36■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Pdcl3Q8BVF2 240 aa21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Kdm4aQ8BW72 1064 aa21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Gsdma2Q32M21 443 aa21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 PdcQ9QW08 244 aa21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Neo1P97798 1493 aa21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Zkscan1Q8BGS3 561 aaKnown RBP21.35■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 EzrP26040 586 aaKnown RBP21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Cnnm3Q32NY4 713 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Cfap69Q8BH53 942 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Gm10563F6WIE4 79 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Fsd1Q7TPM6 496 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Kcnh5Q920E3 988 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Ipo4Q8VI75 1082 aa21.34■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Igf1rQ60751 1373 aa21.33■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 EappQ5BU09 281 aa21.33■■□□□ 1.01
Smarcc1-207ENSMUST00000199896 Prpf4bQ61136 1007 aaKnown RBP21.33■■□□□ 1
Smarcc1-207ENSMUST00000199896 Spty2d1Q68FG3 682 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 Nlrp3Q8R4B8 1033 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 SelenooQ9DBC0 667 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 CarsQ9ER72 831 aaKnown RBP21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 Tiam1Q60610 1591 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 Top1mtQ8R4U6 593 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 Rrs1Q9CYH6 365 aaKnown RBP21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 TnikP83510 1323 aa21.32■■□□□ 1
Smarcc1-207ENSMUST00000199896 MvpQ9EQK5 861 aa21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Kcnn1Q9EQR3 537 aa21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Zrsr2Q62377 462 aaKnown RBP21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Maco1Q7TQE6 664 aaKnown RBP21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Erich4Q3UNU4 136 aa21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Erc1Q99MI1 1120 aa21.31■■□□□ 1
Smarcc1-207ENSMUST00000199896 Mug1P28665 1476 aa21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Fsd2Q8BZ52 692 aa21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Tubb6Q922F4 447 aa21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Ncbp1Q3UYV9 790 aaKnown RBP21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Ptpdc1Q6NZK8 747 aa21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Krt84Q99M73 603 aa21.29■■□□□ 1
Smarcc1-207ENSMUST00000199896 Magi1Q6RHR9 1471 aa21.28■■□□□ 1
Smarcc1-207ENSMUST00000199896 Elp1Q7TT37 1333 aaKnown RBP21.28■■□□□ 1
Smarcc1-207ENSMUST00000199896 Dusp9Q7TNL7 452 aa21.28■■□□□ 1
Smarcc1-207ENSMUST00000199896 Fbxo2Q80UW2 297 aa21.28■■□□□ 1
Smarcc1-207ENSMUST00000199896 Zscan20B2KFW1 1030 aa21.27■■□□□ 1
Smarcc1-207ENSMUST00000199896 Ccne1Q61457 408 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 NexmifQ5DTT1 1515 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Ppp1r15aP17564 657 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Wdhd1P59328 1117 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Washc2Q6PGL7 1334 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Kif20aP97329 887 aa21.26■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Irgm2A0A140LIF8 407 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 VeztQ3ZK22 780 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Slc5a1Q8C3K6 665 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Pms1Q8K119 917 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 ArsiQ32KI9 573 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Tango6Q8C3S2 1079 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Slc26a8Q8R0C3 999 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 TnmdQ9EP64 317 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 TchhA0A0B4J1F9 1599 aa21.25■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Galntl5Q9D4M9 431 aa21.24■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Gigyf1Q99MR1 1044 aaKnown RBP21.24■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Golim4Q8BXA1 655 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Brf1Q8CFK2 676 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Pnmal2G3X9N3 661 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Ccdc155Q80VJ8 648 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Krt85Q9Z2T6 507 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Tnni2P13412 182 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Klc3Q91W40 508 aa21.23■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Fam13aQ8BGI4 693 aa21.22■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Cdc45Q9Z1X9 566 aa21.22■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 AcrbpQ3V140 540 aa21.22■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 NefhP19246 1090 aa21.22■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Smarca5Q91ZW3 1051 aaKnown RBP21.22■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 SfswapQ3USH5 945 aaKnown RBP21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Cdkl5Q3UTQ8 938 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 GpkowQ56A08 488 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 ImmtQ8CAQ8 757 aaKnown RBP21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Atxn3Q9CVD2 355 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Sos1Q62245 1319 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Cep57l1Q8VDS7 400 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Cyp26c1B2RXA7 518 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 AidaQ8C4Q6 305 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Nup133Q8R0G9 1155 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Crocc2F6XLV1 1638 aa21.21■□□□□ 0.99
Smarcc1-207ENSMUST00000199896 Eif5P59325 429 aaKnown RBP21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Tspyl2Q7TQI8 677 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Stim1P70302 685 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Aldh1l1Q8R0Y6 902 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Slc5a4bQ91ZP4 660 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Tfip11Q9ERA6 838 aaKnown RBP21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Kif3cO35066 796 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Ccdc178Q8CDV0 866 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Abcc5Q9R1X5 1436 aa21.2■□□□□ 0.98
Smarcc1-207ENSMUST00000199896 Mctp1E9PV86 951 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms