RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Ddx17Q501J6 650 aaKnown RBP21.79■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Map2P20357 1828 aa21.79■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Eif4a2P10630 407 aa21.79■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Zfp777B9EKF4 885 aa21.77■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Prkrip1Q9CWV6 186 aaKnown RBP21.77■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Mapk8ip3Q9ESN9 1337 aa21.77■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Ralbp1Q62172 648 aa21.77■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 Ncbp3Q8BZR9 615 aaKnown RBP21.77■■□□□ 1.08
Hoxc4-202ENSMUST00000165375 DaxxO35613 739 aa21.76■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Kcnh8P59111 1102 aa21.76■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Dixdc1Q80Y83 711 aa21.76■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Dzip1Q8BMD2 852 aa21.74■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Ciz1Q8VEH2 845 aa21.74■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Hoxc9P09633 260 aa21.74■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 TatQ8QZR1 454 aa21.74■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Neurod2Q62414 383 aa21.73■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Znf541Q0GGX2 1363 aa21.73■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Fmnl2A2APV2 1086 aa21.72■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 NeflP08551 543 aa21.72■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Q4VA45 678 aa21.71■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Kif24Q6NWW5 1356 aa21.71■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Cavin4A2AMM0 362 aa21.71■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 Nfat5Q9WV30 1534 aa21.71■■□□□ 1.07
Hoxc4-202ENSMUST00000165375 ChgaP26339 463 aaKnown RBP21.7■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 MpripP97434 1024 aa21.7■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Ccdc30Q8BVF4 654 aa21.7■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Spef2Q8C9J3 1734 aa21.69■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Tmem132eQ6IEE6 982 aa21.69■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Dnajc10Q9DC23 793 aa21.69■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Dusp27Q148W8 1138 aa21.68■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Ccne1Q61457 408 aa21.68■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 PaskQ8CEE6 1383 aa21.68■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 PtprvP70289 1705 aa21.66■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Eya1P97767 591 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Gimap5Q8BWF2 308 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Cadps2Q8BYR5 1297 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Zmym3Q9JLM4 1370 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Erbb3Q61526 1339 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Ttll13A4Q9F6 804 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Swt1Q9DBQ9 907 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Robo1O89026 1612 aa21.65■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Siglec1Q62230 1695 aa21.64■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Nkx1-2P42580 305 aa21.64■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Mcm10Q0VBD2 885 aa21.64■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 Stk31Q99MW1 1018 aa21.64■■□□□ 1.06
Hoxc4-202ENSMUST00000165375 TnrQ8BYI9 1358 aa21.64■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Uhrf1bp1B2KF50 1429 aa21.63■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Parp14Q2EMV9 1817 aa21.63■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Atp7bQ64446 1462 aa21.63■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Atp10bB1AWN4 1474 aa21.62■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Gm21698A0A087WQP8 267 aa21.62■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Gm21671G3UY31 267 aa21.62■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Atxn3Q9CVD2 355 aa21.62■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Mre11Q61216 706 aa21.61■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Plin1Q8CGN5 517 aa21.61■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Tet3Q8BG87 1668 aa21.61■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Mbd3Q9Z2D8 285 aaKnown RBP21.61■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Ptpn23Q6PB44 1692 aa21.6■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Ecm2Q5FW85 670 aa21.6■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Nol11Q8BJW5 723 aaKnown RBP21.6■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Bcl11bQ99PV8 884 aa21.6■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Cabp2Q9JLK4 216 aa21.6■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Card10P58660 1021 aa21.59■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Nid2O88322 1403 aa21.59■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 Rab11fip3Q8CHD8 1047 aa21.58■■□□□ 1.05
Hoxc4-202ENSMUST00000165375 ZgpatQ8VDM1 511 aa21.58■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Ttc41Q692V3 1318 aa21.58■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Bcl9lQ67FY2 1494 aa21.58■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 CanxP35564 591 aaKnown RBP21.57■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Abca15E9PWH4 1668 aa21.57■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 HdgfP51859 237 aaKnown RBP21.56■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Pdcl3Q8BVF2 240 aa21.56■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Amotl2Q8K371 772 aa21.56■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Plekhh1Q80TI1 1356 aa21.56■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Pdlim2Q8R1G6 349 aa21.56■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Slit2Q9R1B9 1521 aa21.55■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Kdm6aO70546 1401 aa21.55■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 TmpoQ61033 693 aaKnown RBP21.55■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Gsdma3Q5Y4Y6 464 aa21.54■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 HypkQ9CR41 129 aa21.53■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Kcnn1Q9EQR3 537 aa21.53■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Gas2l2Q5SSG4 860 aa21.52■■□□□ 1.04
Hoxc4-202ENSMUST00000165375 Tom1O88746 492 aa21.51■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ksr2Q3UVC0 959 aa21.51■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 TkfcQ8VC30 578 aa21.51■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Dnai1Q8C0M8 701 aa21.5■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Sart3Q9JLI8 962 aaKnown RBP21.5■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Hspa1lP16627 641 aa21.49■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ppm1gQ61074 542 aa21.49■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 OptnQ8K3K8 584 aa21.49■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Acsbg1Q99PU5 721 aa21.49■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Txnrd1Q9JMH6 613 aa21.49■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 CrklP47941 303 aa21.48■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ybx3Q9JKB3 361 aaKnown RBP21.48■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Cdhr2E9Q7P9 1308 aa21.48■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ttc21aQ8C0S4 1314 aa21.48■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ccar1Q8CH18 1146 aaKnown RBP21.47■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Col15a1O35206 1367 aa21.47■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 NudcO35685 332 aaKnown RBP21.47■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms