RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Rab3gap2Q8BMG7 1366 aa18.64■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Ppp1r15aP17564 657 aa18.63■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Pak3Q61036 559 aa18.63■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Zpr1Q62384 459 aa18.63■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Ccne1Q61457 408 aa18.62■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Ppp2r1aQ76MZ3 589 aa18.62■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Slit1Q80TR4 1531 aa18.62■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Cacna1sQ02789 1880 aa18.61■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Sgsm1Q8BPQ7 1093 aa18.61■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Nlrp6Q91WS2 869 aa18.61■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Vps33bP59016 617 aa18.59■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Ptpn23Q6PB44 1692 aa18.59■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Kdm6aO70546 1401 aa18.58■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Zranb3Q6NZP1 1069 aa18.58■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Kat6bQ8BRB7 1872 aa18.57■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Ginm1Q91WR6 327 aa18.57■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Uhrf1bp1lA2RSJ4 1457 aa18.57■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Fer1l6E0CZ42 1862 aa18.56■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Eif4a2P10630 407 aa18.56■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Ltbp1Q8CG19 1712 aa18.55■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Rsph6aQ8CDR2 708 aa18.55■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Cc2d1aQ8K1A6 943 aa18.55■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Col15a1O35206 1367 aa18.55■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Mst1rQ62190 1378 aa18.55■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Gm10471E9Q1C7 252 aa18.54■□□□□ 0.56
Ercc1-203ENSMUST00000160369 FocadA2AKG8 1798 aa18.54■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Eya1P97767 591 aa18.52■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Ankrd23Q812A3 306 aa18.52■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Slc12a5Q91V14 1138 aa18.52■□□□□ 0.56
Ercc1-203ENSMUST00000160369 Simc1E9Q6E9 1354 aa18.52■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Parp14Q2EMV9 1817 aa18.51■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Akap11E9Q777 1895 aa18.5■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Aplp2Q06335 707 aa18.5■□□□□ 0.55
Ercc1-203ENSMUST00000160369 MpndQ3TV65 487 aa18.5■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Taok3Q8BYC6 898 aa18.5■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Nup153E9Q3G8 1462 aaKnown RBP18.5■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Gsdma3Q5Y4Y6 464 aa18.49■□□□□ 0.55
Ercc1-203ENSMUST00000160369 GsdmaQ9EST1 446 aa18.49■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Exoc5Q3TPX4 708 aa18.48■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Ddb1Q3U1J4 1140 aaKnown RBP18.48■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Tsen2Q6P7W5 460 aa18.48■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Ppp6r1Q7TSI3 856 aa18.48■□□□□ 0.55
Ercc1-203ENSMUST00000160369 4930572O03RikQ8C5Y0 211 aa18.48■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Kcnh4A2A5F7 1018 aa18.47■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Rab11fip3Q8CHD8 1047 aa18.47■□□□□ 0.55
Ercc1-203ENSMUST00000160369 P2rx7Q9Z1M0 595 aa18.47■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Mast2Q60592 1734 aa18.46■□□□□ 0.55
Ercc1-203ENSMUST00000160369 MpripP97434 1024 aa18.46■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Sik1Q60670 779 aa18.46■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Ppp1r37Q8BKR5 712 aa18.46■□□□□ 0.55
Ercc1-203ENSMUST00000160369 Elp1Q7TT37 1333 aaKnown RBP18.46■□□□□ 0.55
Ercc1-203ENSMUST00000160369 ThemisQ8BGW0 636 aa18.45■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Sugp2Q8CH09 1067 aa18.45■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Nwd2Q6P5U7 1742 aa18.44■□□□□ 0.54
Ercc1-203ENSMUST00000160369 4930523C07RikE9Q2T4 99 aa18.44■□□□□ 0.54
Ercc1-203ENSMUST00000160369 U2af1Q9D883 239 aaKnown RBP18.44■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Tnks1bp1P58871 1720 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Col22a1E9Q7P1 1613 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Wwc2Q6NXJ0 1187 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Rpgrip1lQ8CG73 1264 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 HypkQ9CR41 129 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Fam50bQ9WTJ8 334 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 PalmQ9Z0P4 383 aa18.43■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Adgrb1Q3UHD1 1582 aa18.42■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Kiaa0319Q5SZV5 1081 aa18.42■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Exoc6Q8R313 802 aa18.42■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Gm21680A0A0G2JGR8 267 aa18.41■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Zcrb1Q9CZ96 217 aaKnown RBP18.41■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Iqcf3Q9D498 203 aa18.41■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Atf7ipQ7TT18 1306 aa18.41■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Q7TT23 1179 aa18.4■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Speer4bQ9D9F7 267 aa18.4■□□□□ 0.54
Ercc1-203ENSMUST00000160369 Fchsd2Q3USJ8 740 aa18.39■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Stk31Q99MW1 1018 aa18.39■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Sall2Q9QX96 1004 aa18.39■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Ly75Q60767 1723 aa18.39■□□□□ 0.53
Ercc1-203ENSMUST00000160369 TnikP83510 1323 aa18.38■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Spef2Q8C9J3 1734 aa18.37■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Eif3bQ8JZQ9 803 aaKnown RBP18.37■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Amotl1Q9D4H4 968 aa18.37■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Plin1Q8CGN5 517 aa18.36■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Ahnak2E9PYB0 1738 aaKnown RBP18.35■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Nsd3Q6P2L6 1439 aa18.35■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Kiaa1107Q80TK0 1369 aa18.35■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Zscan21Q07231 555 aa18.35■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Rgs17Q9QZB0 210 aa18.35■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Ccdc6D3YZP9 469 aa18.34■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Ubap1lG3UW59 384 aa18.34■□□□□ 0.53
Ercc1-203ENSMUST00000160369 Mapk8ip3Q9ESN9 1337 aa18.32■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.32■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Mrs2Q5NCE8 434 aa18.32■□□□□ 0.52
Ercc1-203ENSMUST00000160369 GakQ99KY4 1305 aa18.31■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Ppfibp2O35711 882 aa18.31■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Mcm10Q0VBD2 885 aa18.31■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Chmp7Q8R1T1 451 aa18.31■□□□□ 0.52
Ercc1-203ENSMUST00000160369 GalcP54818 684 aa18.3■□□□□ 0.52
Ercc1-203ENSMUST00000160369 TmpoQ61033 693 aaKnown RBP18.3■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Phkg2Q9DB30 406 aa18.3■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Hmgb2P30681 210 aaKnown RBP18.29■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Lrit1Q8K099 624 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 81.5 ms