RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Qtrt2B8ZXI1 415 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Samd1D3YXK1 519 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Idi2Q8BFZ6 227 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Dzip1Q8BMD2 852 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 HypkQ9CR41 129 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Nek4Q9Z1J2 792 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Olfml1Q8BSH2 233 aa10.7□□□□□ -0.7
Col28a1-201ENSMUST00000115537 1700010I14RikQ7TPG0 532 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Kcnh5Q920E3 988 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Naip7Q9JIB3 1402 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Rlbp1Q9Z275 317 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 ScaperF8VQ70 1398 aaKnown RBP10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Tpd52l1O54818 204 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Ccne1Q61457 408 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Asxl1P59598 1514 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 PtprgQ05909 1442 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Kcnj4P52189 445 aa10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Zcchc11B2RX14 1644 aaKnown RBP10.69□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Kdm6bQ5NCY0 1641 aa10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Cavin1O54724 392 aa10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Utp3Q9JI13 469 aaKnown RBP10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Skint5A7XUY5 1461 aa10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Cald1E9QA15 768 aaKnown RBP10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 EzrP26040 586 aaKnown RBP10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Rbm27Q5SFM8 1060 aaKnown RBP10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Serpina10Q8R121 448 aa10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Zeb2Q9R0G7 1215 aa10.68□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Ccdc60Q8C4J0 545 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Grpel1Q99LP6 217 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Cspp1B2RX88 1205 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Rasa1E9PYG6 1038 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Pnmal2G3X9N3 661 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Nol10Q5RJG1 687 aaKnown RBP10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Tmem132eQ6IEE6 982 aa10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Nsfl1cQ9CZ44 370 aaKnown RBP10.67□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Rab11fip3Q8CHD8 1047 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm21663A0A0G2JE01 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm7361D3Z6R1 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 5031410I06RikE9Q4E0 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm1979E9QAN3 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm5862K7N5V5 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm10220K7N660 267 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Plekhd1B2RPU2 505 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Eif4g2Q62448 906 aaKnown RBP10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Frmpd2A0A140LI67 1392 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 MpndQ3TV65 487 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Tshz2Q68FE9 1030 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Zfp251Q6PCX8 632 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Cabp2Q9JLK4 216 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Chd1P40201 1711 aa10.66□□□□□ -0.7
Col28a1-201ENSMUST00000115537 SphkapQ6NSW3 1687 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Abcc6Q9R1S7 1498 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Idi1P58044 227 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Smg7Q5RJH6 1138 aaKnown RBP10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Bloc1s4Q8VED2 215 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 HnrnpuQ8VEK3 800 aaKnown RBP10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Gm10093D3YYI8 482 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Hdac1O09106 482 aaKnown RBP10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 AcrbpQ3V140 540 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Usp16Q99LG0 825 aa10.65□□□□□ -0.7
Col28a1-201ENSMUST00000115537 Setd1bQ8CFT2 1985 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Mindy4Q3UQI9 744 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Sass6Q80UK7 654 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Mknk2Q8CDB0 459 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Chmp3Q9CQ10 224 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Fmn2Q9JL04 1578 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Ttc41Q692V3 1318 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Mug2P28666 1451 aa10.65□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Efcab6Q6P1E8 1516 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 AU022751B1B0V2 589 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cetn4Q8K4K1 168 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Nos1Q9Z0J4 1429 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 St18Q80TY4 1045 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 PalmQ9Z0P4 383 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Gcc2Q8CHG3 1679 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Tomm22Q9CPQ3 142 aa10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Edc4Q3UJB9 1406 aaKnown RBP10.64□□□□□ -0.71
Col28a1-201ENSMUST00000115537 MccE9PWI3 1003 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Rps6ka5Q8C050 863 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Swt1Q9DBQ9 907 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 IbtkQ6ZPR6 1352 aaKnown RBP10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Hsp90b1P08113 802 aaKnown RBP10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 NhsB1AV60 1647 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 PzpQ61838 1495 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 AlkP97793 1621 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Nutm1Q8BHP2 1126 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Nol11Q8BJW5 723 aaKnown RBP10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Podxl2Q8CAE9 603 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 ApobrQ8VBT6 942 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Gtpbp4Q99ME9 634 aaKnown RBP10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Hvcn1Q3U2S8 269 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Filip1lQ6P6L0 1131 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 4930572O03RikQ8C5Y0 211 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Atxn3Q9CVD2 355 aa10.63□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Clasp1Q80TV8 1535 aaKnown RBP10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cdkn1cP49919 348 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Atp6v1dP57746 247 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cgnl1Q6AW69 1298 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Sf3a1Q8K4Z5 791 aaKnown RBP10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Chmp4cQ9D7F7 232 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms