RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Trpm2Q91YD4 1506 aa17.72■□□□□ 0.43
Syn1-202ENSMUST00000115345 Nos1Q9Z0J4 1429 aa17.72■□□□□ 0.43
Syn1-202ENSMUST00000115345 Tbc1d31Q6NXY1 996 aa17.72■□□□□ 0.43
Syn1-202ENSMUST00000115345 CalrP14211 416 aaKnown RBP17.71■□□□□ 0.43
Syn1-202ENSMUST00000115345 Ulbp1Q8HWA3 334 aa17.71■□□□□ 0.43
Syn1-202ENSMUST00000115345 Trim30aP15533 496 aa17.71■□□□□ 0.42
Syn1-202ENSMUST00000115345 Kif2aP28740 705 aa17.7■□□□□ 0.42
Syn1-202ENSMUST00000115345 Lcmt1A0A0U1RNF2 332 aa17.7■□□□□ 0.42
Syn1-202ENSMUST00000115345 Gli2Q0VGT2 1544 aa17.69■□□□□ 0.42
Syn1-202ENSMUST00000115345 RictorQ6QI06 1708 aa17.69■□□□□ 0.42
Syn1-202ENSMUST00000115345 Terf2O35144 541 aa17.69■□□□□ 0.42
Syn1-202ENSMUST00000115345 Dnai2A2AC93 623 aa17.69■□□□□ 0.42
Syn1-202ENSMUST00000115345 Ciz1Q8VEH2 845 aa17.68■□□□□ 0.42
Syn1-202ENSMUST00000115345 Ess2O70279 479 aa17.68■□□□□ 0.42
Syn1-202ENSMUST00000115345 Fbxw10Q5SUS0 1030 aa17.68■□□□□ 0.42
Syn1-202ENSMUST00000115345 Afap1Q80YS6 731 aa17.68■□□□□ 0.42
Syn1-202ENSMUST00000115345 Rai14Q9EP71 979 aaKnown RBP17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Zkscan5Q9Z1D8 819 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Knl1Q66JQ7 1612 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Xrn1P97789 1719 aaKnown RBP17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Nxf2Q4ZGD8 691 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 CltcQ68FD5 1675 aaKnown RBP17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Bcl9Q9D219 1425 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Naip6Q9JIB6 1403 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Zrsr2Q62377 462 aaKnown RBP17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Tspyl2Q7TQI8 677 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Smc2Q8CG48 1191 aaKnown RBP17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Cc2d1aQ8K1A6 943 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Themis2Q91YX0 663 aa17.67■□□□□ 0.42
Syn1-202ENSMUST00000115345 Zscan25B2RX31 543 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Pnmal2G3X9N3 661 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Anp32cQ64G17 123 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Zkscan4Q5SZT6 480 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Saal1Q9D2C2 474 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Map3k5O35099 1380 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Klra1P20937 262 aa17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 Rad21Q61550 635 aaKnown RBP17.66■□□□□ 0.42
Syn1-202ENSMUST00000115345 HomezQ80W88 542 aa17.65■□□□□ 0.42
Syn1-202ENSMUST00000115345 Ccdc173A0JLY1 547 aa17.65■□□□□ 0.42
Syn1-202ENSMUST00000115345 Rcan3Q9JKK0 239 aa17.65■□□□□ 0.42
Syn1-202ENSMUST00000115345 Serpinb6bO08804 377 aa17.64■□□□□ 0.42
Syn1-202ENSMUST00000115345 NagaQ9QWR8 415 aa17.64■□□□□ 0.42
Syn1-202ENSMUST00000115345 Phc3Q8CHP6 981 aa17.64■□□□□ 0.41
Syn1-202ENSMUST00000115345 Klhl33G3UW92 533 aa17.64■□□□□ 0.41
Syn1-202ENSMUST00000115345 Zfp444Q3TDV8 331 aaKnown RBP17.64■□□□□ 0.41
Syn1-202ENSMUST00000115345 Pes1Q9EQ61 584 aaKnown RBP17.64■□□□□ 0.41
Syn1-202ENSMUST00000115345 Uggt2E9Q4X2 1504 aa17.63■□□□□ 0.41
Syn1-202ENSMUST00000115345 Fmn2Q9JL04 1578 aa17.63■□□□□ 0.41
Syn1-202ENSMUST00000115345 HalP35492 657 aa17.63■□□□□ 0.41
Syn1-202ENSMUST00000115345 MvpQ9EQK5 861 aa17.63■□□□□ 0.41
Syn1-202ENSMUST00000115345 Ltbp4Q8K4G1 1666 aa17.63■□□□□ 0.41
Syn1-202ENSMUST00000115345 Card6E9PWH2 1175 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Myo1cQ9WTI7 1063 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Gm11983V9GXS8 105 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Znf518aB2RRF6 1478 aaKnown RBP17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Taf3Q5HZG4 932 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 CtifQ6PEE2 600 aaKnown RBP17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Cep120Q7TSG1 988 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Mast1Q9R1L5 1570 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Adam1bQ8R534 806 aa17.62■□□□□ 0.41
Syn1-202ENSMUST00000115345 Rsph3aQ3UFY4 516 aa17.61■□□□□ 0.41
Syn1-202ENSMUST00000115345 Bsdc1Q80Y55 427 aa17.61■□□□□ 0.41
Syn1-202ENSMUST00000115345 Klra4Q60651 263 aa17.61■□□□□ 0.41
Syn1-202ENSMUST00000115345 Rmi1Q9D4G9 616 aa17.61■□□□□ 0.41
Syn1-202ENSMUST00000115345 Syt10Q9R0N4 523 aa17.6■□□□□ 0.41
Syn1-202ENSMUST00000115345 MafgO54790 162 aa17.6■□□□□ 0.41
Syn1-202ENSMUST00000115345 Plekhg5Q66T02 1073 aa17.6■□□□□ 0.41
Syn1-202ENSMUST00000115345 Styxl1Q9DAR2 321 aa17.6■□□□□ 0.41
Syn1-202ENSMUST00000115345 Ankrd49Q8VE42 238 aa17.59■□□□□ 0.41
Syn1-202ENSMUST00000115345 SarnpQ9D1J3 210 aaKnown RBP17.59■□□□□ 0.41
Syn1-202ENSMUST00000115345 Rtel1Q0VGM9 1203 aa17.59■□□□□ 0.41
Syn1-202ENSMUST00000115345 Cep63Q3UPP8 700 aa17.59■□□□□ 0.41
Syn1-202ENSMUST00000115345 Topbp1Q6ZQF0 1515 aa17.58■□□□□ 0.41
Syn1-202ENSMUST00000115345 Ccar1Q8CH18 1146 aaKnown RBP17.58■□□□□ 0.41
Syn1-202ENSMUST00000115345 Dcaf11Q91VU6 549 aa17.58■□□□□ 0.41
Syn1-202ENSMUST00000115345 Sugt1Q9CX34 336 aa17.58■□□□□ 0.4
Syn1-202ENSMUST00000115345 Ncoa1P70365 1447 aa17.58■□□□□ 0.4
Syn1-202ENSMUST00000115345 Plch2A2AP18 1501 aa17.58■□□□□ 0.4
Syn1-202ENSMUST00000115345 Trim55G3X8Y1 545 aa17.57■□□□□ 0.4
Syn1-202ENSMUST00000115345 Kcnb1Q03717 857 aa17.57■□□□□ 0.4
Syn1-202ENSMUST00000115345 Q9CYI0 393 aa17.57■□□□□ 0.4
Syn1-202ENSMUST00000115345 Ankrd36D3Z4K0 1415 aa17.57■□□□□ 0.4
Syn1-202ENSMUST00000115345 Arhgap23Q69ZH9 1483 aa17.57■□□□□ 0.4
Syn1-202ENSMUST00000115345 Phlpp1Q8CHE4 1687 aa17.56■□□□□ 0.4
Syn1-202ENSMUST00000115345 1700122O11RikJ3QPW6 241 aa17.56■□□□□ 0.4
Syn1-202ENSMUST00000115345 Tbc1d32Q3URV1 1296 aa17.56■□□□□ 0.4
Syn1-202ENSMUST00000115345 Med14A2ABV5 1459 aaKnown RBP17.56■□□□□ 0.4
Syn1-202ENSMUST00000115345 Atp6v1aP50516 617 aaKnown RBP17.55■□□□□ 0.4
Syn1-202ENSMUST00000115345 4931400O07RikQ9D4M5 137 aa17.55■□□□□ 0.4
Syn1-202ENSMUST00000115345 Ipo7Q9EPL8 1038 aaKnown RBP17.55■□□□□ 0.4
Syn1-202ENSMUST00000115345 Ripply1Q2WG77 201 aa17.54■□□□□ 0.4
Syn1-202ENSMUST00000115345 Ccdc40Q8BI79 1192 aa17.53■□□□□ 0.4
Syn1-202ENSMUST00000115345 Golga5Q9QYE6 729 aa17.53■□□□□ 0.4
Syn1-202ENSMUST00000115345 Abca17E9PX95 1733 aa17.53■□□□□ 0.4
Syn1-202ENSMUST00000115345 4930519G04RikQ9CPT7 205 aa17.53■□□□□ 0.4
Syn1-202ENSMUST00000115345 Mis12Q9CY25 206 aa17.53■□□□□ 0.4
Syn1-202ENSMUST00000115345 Npdc1Q64322 332 aa17.52■□□□□ 0.4
Syn1-202ENSMUST00000115345 Rimbp3Q3V0F0 1606 aa17.52■□□□□ 0.39
Syn1-202ENSMUST00000115345 Klra3Q64329 266 aa17.52■□□□□ 0.39
Syn1-202ENSMUST00000115345 Bach2P97303 839 aa17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms