RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Zmym3Q9JLM4 1370 aa8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 Gse1Q3U3C9 1213 aa8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 Fbxo2Q80UW2 297 aa8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 Setd1aE9PYH6 1716 aa8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 Zc3h13E9Q784 1729 aaKnown RBP8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 PalldQ9ET54 1408 aa8.4□□□□□ -1.06
Ccr9-201ENSMUST00000111454 Isy1Q69ZQ2 285 aaKnown RBP8.4□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Tmc1Q8R4P5 757 aa8.4□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Gm20521D3Z5F7 333 aa8.39□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Dnajc14Q921R4 703 aa8.39□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Cdca7lQ922M5 438 aa8.39□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Eif2ak4Q9QZ05 1648 aa8.39□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Ripk4Q9ERK0 786 aa8.39□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Rims1Q99NE5 1463 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Tmf1B9EKI3 1091 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Zscan10Q3URR7 782 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Skida1Q80YR3 822 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Stk26Q99JT2 416 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Mbd3Q9Z2D8 285 aaKnown RBP8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Pdia4P08003 638 aaKnown RBP8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Trim44Q9QXA7 346 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Arhgef28P97433 1693 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Tubgcp6G5E8P0 1769 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Nrxn3Q6P9K9 1571 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Plxnc1Q9QZC2 1574 aa8.38□□□□□ -1.07
Ccr9-201ENSMUST00000111454 VgfQ0VGU4 617 aa8.37□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Slc52a2Q9D8F3 450 aa8.37□□□□□ -1.07
Ccr9-201ENSMUST00000111454 PzpQ61838 1495 aa8.37□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Gtf3c6Q9D8P7 227 aa8.37□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Myom1Q62234 1667 aaKnown RBP8.37□□□□□ -1.07
Ccr9-201ENSMUST00000111454 OsbpQ3B7Z2 805 aa8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Puf60Q3UEB3 564 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Mak16Q8BGS0 296 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 HnrnpmQ9D0E1 729 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Zfp444Q3TDV8 331 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Utp14aQ640M1 767 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Ppp1r9bQ6R891 817 aaKnown RBP8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Slit3Q9WVB4 1523 aa8.36□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Lmtk3Q5XJV6 1424 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Kiaa0753Q6A000 959 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Pdcl2Q78Y63 240 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 BbxQ8VBW5 907 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Med1Q925J9 1575 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Erbb3Q61526 1339 aa8.35□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Ppp6r1Q7TSI3 856 aa8.34□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Sbno1Q689Z5 1390 aa8.34□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Fam184bQ0KK56 942 aa8.34□□□□□ -1.07
Ccr9-201ENSMUST00000111454 Gli3Q61602 1583 aa8.34□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Esx1O88933 382 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Usp40Q8BWR4 1235 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Stac3Q8BZ71 360 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Plcd3Q8K2J0 785 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Gys2Q8VCB3 704 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Gm16486A0A1D5RMD1 1434 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Samd1D3YXK1 519 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Il4rP16382 810 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Gtf2e1Q9D0D5 440 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Cep152A2AUM9 1736 aaKnown RBP8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Mcm4P49717 862 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Ipo8Q7TMY7 1010 aa8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Eif2s2Q99L45 331 aaKnown RBP8.33□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Pik3r4Q8VD65 1358 aa8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Ppp2r1aQ76MZ3 589 aa8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 IqubQ8CDK3 788 aa8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Tns3Q5SSZ5 1440 aa8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Dhx16G3X8X0 1044 aaKnown RBP8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Evi5lH3BKQ3 813 aa8.32□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Tmem94Q7TSH8 1360 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Tex14Q7M6U3 1450 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Lrrc7Q80TE7 1490 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Hsp90ab1P11499 724 aaKnown RBP8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Slain2Q8CI08 581 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Hyal3Q8VEI3 412 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Antxr1Q9CZ52 562 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 FanciQ8K368 1330 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Pola1P33609 1465 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Spryd3E9Q9B3 442 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 B4galnt3Q6L8S8 986 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Bcl11bQ99PV8 884 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Kdm2bQ6P1G2 1309 aa8.31□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Thsd7aQ69ZU6 1645 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Amigo3Q8C2S7 508 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 CrbnQ8C7D2 445 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Ccdc94Q9D6J3 314 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Ush1cQ9ES64 910 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Erbb4Q61527 1308 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Cdk5rap2Q8K389 1822 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Rab3gap2Q8BMG7 1366 aa8.3□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Dcaf11Q91VU6 549 aa8.29□□□□□ -1.08
Ccr9-201ENSMUST00000111454 MaddQ80U28 1577 aa8.29□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Cep170bQ80U49 1574 aa8.29□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Hspa1lP16627 641 aa8.29□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Cnga1P29974 684 aa8.29□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Kif7B7ZNG0 1348 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Fam181bQ80VF6 417 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Chmp5Q9D7S9 219 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Mapk8ip3Q9ESN9 1337 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Q3UJC8 639 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Atp2b2Q9R0K7 1198 aa8.28□□□□□ -1.08
Ccr9-201ENSMUST00000111454 Arap3Q8R5G7 1538 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms