RNA–Protein interactions for RNA: ENSMUST00000023070.5

Upk3a-201, Transcript of Uroplakin-3a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3a, Length 1,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3a-201ENSMUST00000023070 Ginm1Q91WR6 327 aa22.76■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Ppfibp2O35711 882 aa22.75■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Vars2Q3U2A8 1060 aa22.75■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Zpr1Q62384 459 aa22.75■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Rpgrip1Q9EPQ2 1331 aa22.75■■□□□ 1.23
Upk3a-201ENSMUST00000023070 FancaQ9JL70 1439 aa22.74■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Plekhd1B2RPU2 505 aa22.73■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Exoc5Q3TPX4 708 aa22.73■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Ubr1O70481 1757 aa22.73■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Sik1Q60670 779 aa22.72■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Mst1rQ62190 1378 aa22.71■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Slit1Q80TR4 1531 aa22.71■■□□□ 1.23
Upk3a-201ENSMUST00000023070 Rab3gap2Q8BMG7 1366 aa22.7■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Erbb3Q61526 1339 aa22.68■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Snapc4Q8BP86 1333 aa22.68■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Slc4a1apE9PX68 744 aa22.68■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Zranb3Q6NZP1 1069 aa22.67■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Mdc1Q5PSV9 1707 aa22.67■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Slc24a1Q91WD8 1130 aa22.66■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Map2P20357 1828 aa22.66■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Hoxc9P09633 260 aa22.65■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Bsdc1Q80Y55 427 aa22.65■■□□□ 1.22
Upk3a-201ENSMUST00000023070 Kcnh4A2A5F7 1018 aa22.64■■□□□ 1.21
Upk3a-201ENSMUST00000023070 TkfcQ8VC30 578 aa22.64■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Pim2Q62070 370 aa22.63■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Col15a1O35206 1367 aa22.63■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Birc3O08863 600 aa22.62■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Fam184bQ0KK56 942 aa22.62■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Scn7aB1AYL1 1681 aa22.62■■□□□ 1.21
Upk3a-201ENSMUST00000023070 PsdQ5DTT2 1024 aa22.61■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Cc2d1aQ8K1A6 943 aa22.61■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Arhgap33Q80YF9 1305 aa22.6■■□□□ 1.21
Upk3a-201ENSMUST00000023070 FocadA2AKG8 1798 aa22.6■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Cwc22Q8C5N3 908 aaKnown RBP22.59■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Afg3l2Q8JZQ2 802 aaKnown RBP22.59■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Ccdc85cE9Q6B2 420 aa22.58■■□□□ 1.21
Upk3a-201ENSMUST00000023070 En2P09066 324 aa22.58■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Gpr150Q8BL07 427 aa22.58■■□□□ 1.21
Upk3a-201ENSMUST00000023070 Nsd3Q6P2L6 1439 aa22.57■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Pnpla7A2AJ88 1352 aa22.55■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Ccne1Q61457 408 aa22.55■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Gm10471E9Q1C7 252 aa22.54■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Magea1O89006 320 aa22.53■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Magea5O89009 320 aa22.53■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Hoxb7P09024 217 aa22.53■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Magea2Q9R2A2 320 aa22.53■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Elp1Q7TT37 1333 aaKnown RBP22.53■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Fam50bQ9WTJ8 334 aa22.52■■□□□ 1.2
Upk3a-201ENSMUST00000023070 Rad17Q6NXW6 688 aa22.51■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Sin3aQ60520 1274 aaKnown RBP22.5■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Q8BT18 775 aa22.5■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Ciz1Q8VEH2 845 aa22.49■■□□□ 1.19
Upk3a-201ENSMUST00000023070 IbtkQ6ZPR6 1352 aaKnown RBP22.49■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Ankrd13dQ6PD24 605 aa22.48■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Ptpn23Q6PB44 1692 aa22.47■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Gm21680A0A0G2JGR8 267 aa22.47■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Pank3Q8R2W9 370 aa22.47■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Kif23E9Q5G3 953 aa22.46■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Dcaf11Q91VU6 549 aa22.46■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Sos2Q02384 1333 aa22.46■■□□□ 1.19
Upk3a-201ENSMUST00000023070 Kcna3P16390 528 aa22.45■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Tmf1B9EKI3 1091 aa22.44■■□□□ 1.18
Upk3a-201ENSMUST00000023070 PrxO55103 1391 aa22.44■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Adgrb1Q3UHD1 1582 aa22.44■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Rps6ka4Q9Z2B9 773 aa22.43■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Arfgef2A2A5R2 1792 aa22.43■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Ahnak2E9PYB0 1738 aaKnown RBP22.43■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Akt1s1Q9D1F4 257 aa22.42■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Speer4bQ9D9F7 267 aa22.42■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Inpp5dQ9ES52 1191 aa22.42■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Aplp2Q06335 707 aa22.41■■□□□ 1.18
Upk3a-201ENSMUST00000023070 ThemisQ8BGW0 636 aa22.41■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Ppp1r37Q8BKR5 712 aa22.41■■□□□ 1.18
Upk3a-201ENSMUST00000023070 4930572O03RikQ8C5Y0 211 aa22.4■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Kcnq2Q9Z351 759 aa22.4■■□□□ 1.18
Upk3a-201ENSMUST00000023070 Kiaa0319lQ8K135 1048 aa22.39■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Smg6P61406 1418 aaKnown RBP22.39■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Simc1E9Q6E9 1354 aa22.38■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Ubxn2bQ0KL01 331 aa22.38■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Fam198bQ3UPI1 517 aa22.38■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Trpc5Q9QX29 975 aa22.38■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Hmgb2P30681 210 aaKnown RBP22.37■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Eya1P97767 591 aa22.36■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Parp14Q2EMV9 1817 aa22.34■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Kdm6aO70546 1401 aa22.34■■□□□ 1.17
Upk3a-201ENSMUST00000023070 AtrnQ9WU60 1428 aa22.34■■□□□ 1.17
Upk3a-201ENSMUST00000023070 Larp1Q6ZQ58 1072 aaKnown RBP22.34■■□□□ 1.17
Upk3a-201ENSMUST00000023070 ApobrQ8VBT6 942 aa22.32■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Eif4a2P10630 407 aa22.31■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Klc3Q91W40 508 aa22.3■■□□□ 1.16
Upk3a-201ENSMUST00000023070 IncenpQ9WU62 880 aa22.3■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Gprasp1Q5U4C1 1347 aa22.3■■□□□ 1.16
Upk3a-201ENSMUST00000023070 NefmP08553 848 aa22.28■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Zscan10Q3URR7 782 aa22.27■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Fchsd2Q3USJ8 740 aa22.27■■□□□ 1.16
Upk3a-201ENSMUST00000023070 Abca3Q8R420 1704 aa22.26■■□□□ 1.15
Upk3a-201ENSMUST00000023070 PnisrA2AJT4 805 aaKnown RBP22.26■■□□□ 1.15
Upk3a-201ENSMUST00000023070 Ccnl1Q52KE7 532 aaKnown RBP22.26■■□□□ 1.15
Upk3a-201ENSMUST00000023070 Emilin1Q99K41 1017 aa22.26■■□□□ 1.15
Upk3a-201ENSMUST00000023070 Trim28Q62318 834 aa22.25■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms