RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Nsd3Q6P2L6 1439 aa21.83■■□□□ 1.09
Sqstm1-201ENSMUST00000015981 NcapgE9PWG6 1004 aa21.83■■□□□ 1.09
Sqstm1-201ENSMUST00000015981 Trim27Q62158 513 aa21.83■■□□□ 1.09
Sqstm1-201ENSMUST00000015981 Cgnl1Q6AW69 1298 aa21.83■■□□□ 1.09
Sqstm1-201ENSMUST00000015981 Mindy4Q3UQI9 744 aa21.83■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Syce3B5KM66 88 aa21.82■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 PtmsQ9D0J8 101 aaKnown RBP21.82■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Kiaa0556Q8C753 1610 aa21.82■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Mdc1Q5PSV9 1707 aa21.81■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Plxnc1Q9QZC2 1574 aa21.81■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Kiaa1210E9Q0C6 1637 aa21.81■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Kidins220E9Q9B7 1793 aa21.81■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Rbm27Q5SFM8 1060 aaKnown RBP21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Kdm4aQ8BW72 1064 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Rps6ka5Q8C050 863 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Zdhhc9P59268 364 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Fbxo2Q80UW2 297 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Ehbp1l1Q99MS7 1716 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 PalldQ9ET54 1408 aa21.8■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Ppp6r3Q922D4 844 aa21.79■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 NhsB1AV60 1647 aa21.79■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 CenpjQ569L8 1344 aa21.79■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Abca6Q8K441 1624 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Wdr78E9PYY5 807 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Rnf214Q8BFU3 668 aaKnown RBP21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Cyp27a1Q9DBG1 533 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Swt1Q9DBQ9 907 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Aldh8a1Q8BH00 487 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Fndc1E9Q043 1732 aa21.78■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Adgrb3Q80ZF8 1522 aa21.77■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Eif4g2Q62448 906 aaKnown RBP21.77■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 IqubQ8CDK3 788 aa21.77■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Gripap1Q8VD04 806 aa21.77■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Znf541Q0GGX2 1363 aa21.77■■□□□ 1.08
Sqstm1-201ENSMUST00000015981 Nucb1Q02819 459 aaKnown RBP21.76■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Nrxn1Q9CS84 1514 aa21.76■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Vamp4O70480 141 aa21.75■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Exosc9Q9JHI7 438 aaKnown RBP21.75■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Cdc42bpgQ80UW5 1551 aa21.75■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Kif4P33174 1231 aa21.74■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Gdpd2Q9ESM6 539 aa21.74■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Elp1Q7TT37 1333 aaKnown RBP21.74■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Gcc1Q9D4H2 778 aa21.74■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Pdia3P27773 505 aaKnown RBP21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Anp32cQ64G17 123 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 E4f1Q8CCE9 783 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Ccdc94Q9D6J3 314 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Gadd45bP22339 160 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 HnrnpuQ8VEK3 800 aaKnown RBP21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Cdc37l1Q9CZP7 335 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Atp10dQ8K2X1 1416 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Glipr1l2Q9CQ35 332 aa21.73■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Lrrc7Q80TE7 1490 aa21.72■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Atp7bQ64446 1462 aa21.72■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Q4VA45 678 aa21.71■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Mcm2P97310 904 aa21.71■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 FanclQ9CR14 375 aa21.71■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Fgd6Q69ZL1 1399 aa21.71■■□□□ 1.07
Sqstm1-201ENSMUST00000015981 Nos1Q9Z0J4 1429 aa21.7■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 MsnP26041 577 aaKnown RBP21.7■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Chd1lQ9CXF7 900 aa21.7■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Fchsd2Q3USJ8 740 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Cfap65Q3V0B4 1847 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 AU022751B1B0V2 589 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Kif3aP28741 701 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Tbc1d31Q6NXY1 996 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Grpel1Q99LP6 217 aa21.68■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Kiaa0753Q6A000 959 aa21.67■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Zranb1Q7M760 708 aa21.67■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Fam43aQ8BUP8 424 aa21.67■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Slc12a5Q91V14 1138 aa21.67■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Ecm2Q5FW85 670 aa21.66■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 PalmQ9Z0P4 383 aa21.66■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Fam13bQ8K2H3 851 aa21.66■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Ift172Q6VH22 1749 aa21.66■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Ccdc173A0JLY1 547 aa21.65■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Mrps27Q8BK72 415 aaKnown RBP21.65■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Gm45015A0A140LII9 184 aa21.65■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Gm18336A0A140LIU8 765 aa21.65■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Znf316Q6PGE4 1016 aa21.64■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 Senp3Q9EP97 568 aaKnown RBP21.64■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 NinlQ6ZQ12 1394 aa21.64■■□□□ 1.06
Sqstm1-201ENSMUST00000015981 BccipQ9CWI3 316 aa21.64■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Znf518aB2RRF6 1478 aaKnown RBP21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Gnai1B2RSH2 354 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Olfml1Q8BSH2 233 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Gnai3Q9DC51 354 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Usp32F8VPZ3 1604 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Zkscan16A2ALW2 728 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Bach2P97303 839 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Ncbp1Q3UYV9 790 aaKnown RBP21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 NexnQ7TPW1 607 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Triml2E9PW10 424 aa21.63■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Inpp5bQ8K337 993 aa21.62■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Dnajc14Q921R4 703 aa21.62■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Prex1Q69ZK0 1650 aa21.62■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Vwa3bJ9JI28 736 aa21.62■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Erc2Q6PH08 957 aa21.61■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Slc52a2Q9D8F3 450 aa21.61■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Fam13aQ8BGI4 693 aa21.61■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms