RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 TnrQ8BYI9 1358 aa20.23■□□□□ 0.83
Ddx49-201ENSMUST00000008004 TnikP83510 1323 aa20.23■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Gas2l2Q5SSG4 860 aa20.23■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Bcl11bQ99PV8 884 aa20.23■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Tnnt3Q9QZ47 272 aa20.23■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Cabp2Q9JLK4 216 aa20.22■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Kank1E9Q238 1360 aa20.21■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Uhrf1bp1B2KF50 1429 aa20.21■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Atp10bB1AWN4 1474 aa20.21■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Gm21698A0A087WQP8 267 aa20.2■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Gm21671G3UY31 267 aa20.2■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Ncbp3Q8BZR9 615 aaKnown RBP20.2■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Atp7bQ64446 1462 aa20.2■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Nid2O88322 1403 aa20.2■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Bcl9lQ67FY2 1494 aa20.19■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Cadps2Q8BYR5 1297 aa20.19■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Zmym3Q9JLM4 1370 aa20.18■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Ciz1Q8VEH2 845 aa20.18■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Stk31Q99MW1 1018 aa20.18■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Swt1Q9DBQ9 907 aa20.17■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Hspa1lP16627 641 aa20.17■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Smim5Q8BT42 78 aa20.17■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Acsbg1Q99PU5 721 aa20.17■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Slit2Q9R1B9 1521 aa20.16■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Card10P58660 1021 aa20.15■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Nol11Q8BJW5 723 aaKnown RBP20.15■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Amotl2Q8K371 772 aa20.15■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Txnrd1Q9JMH6 613 aa20.15■□□□□ 0.82
Ddx49-201ENSMUST00000008004 Zfp777B9EKF4 885 aa20.14■□□□□ 0.81
Ddx49-201ENSMUST00000008004 TmpoQ61033 693 aaKnown RBP20.12■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Iqcf3Q9D498 203 aa20.12■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Marf1Q8BJ34 1730 aaKnown RBP20.12■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Zfp142G5E869 1843 aa20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Kdm6aO70546 1401 aa20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Ttc41Q692V3 1318 aa20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Plekhh1Q80TI1 1356 aa20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Znf526Q8BI66 675 aa20.11■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Col15a1O35206 1367 aa20.1■□□□□ 0.81
Ddx49-201ENSMUST00000008004 OptnQ8K3K8 584 aa20.1■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Tom1O88746 492 aa20.09■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Ksr2Q3UVC0 959 aa20.09■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Cdhr2E9Q7P9 1308 aa20.09■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Ahnak2E9PYB0 1738 aaKnown RBP20.09■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Ybx3Q9JKB3 361 aaKnown RBP20.09■□□□□ 0.81
Ddx49-201ENSMUST00000008004 CrklP47941 303 aa20.08■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Ppp1r37Q8BKR5 712 aa20.08■□□□□ 0.81
Ddx49-201ENSMUST00000008004 Arfgef2A2A5R2 1792 aa20.08■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Qtrt2B8ZXI1 415 aa20.07■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Snap23O09044 210 aa20.07■□□□□ 0.8
Ddx49-201ENSMUST00000008004 HypkQ9CR41 129 aa20.07■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Upf2A2AT37 1269 aaKnown RBP20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Ttc21aQ8C0S4 1314 aa20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Trpm3Q5F4S9 1721 aa20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 ZgpatQ8VDM1 511 aa20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Bcl2l12Q9D3J3 255 aa20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Ankrd50F7BE84 1390 aa20.06■□□□□ 0.8
Ddx49-201ENSMUST00000008004 RgmbQ7TQ33 436 aa20.05■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Senp3Q9EP97 568 aaKnown RBP20.05■□□□□ 0.8
Ddx49-201ENSMUST00000008004 FocadA2AKG8 1798 aa20.05■□□□□ 0.8
Ddx49-201ENSMUST00000008004 TkfcQ8VC30 578 aa20.04■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Gsdma3Q5Y4Y6 464 aa20.03■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Rbm25B2RY56 838 aaKnown RBP20.03■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Gm10471E9Q1C7 252 aa20.03■□□□□ 0.8
Ddx49-201ENSMUST00000008004 HdgfP51859 237 aaKnown RBP20.03■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Trim26Q99PN3 545 aa20.03■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Rab11fip3Q8CHD8 1047 aa20.02■□□□□ 0.8
Ddx49-201ENSMUST00000008004 Cdc37l1Q9CZP7 335 aa20.02■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Simc1E9Q6E9 1354 aa20.01■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Calr4Q3TQS0 420 aa20.01■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Klhdc4Q921I2 584 aa20.01■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Slit1Q80TR4 1531 aa20.01■□□□□ 0.79
Ddx49-201ENSMUST00000008004 CastP51125 788 aa20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Ddx54Q8K4L0 874 aaKnown RBP20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Aplp2Q06335 707 aa20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Slx1bQ8BX32 270 aa20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Ccar1Q8CH18 1146 aaKnown RBP20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Amotl1Q9D4H4 968 aa20■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Gnai1B2RSH2 354 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Zranb3Q6NZP1 1069 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Gnai3Q9DC51 354 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Apbb1Q9QXJ1 710 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Arhgef1Q61210 920 aaKnown RBP19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Polr3glQ8R0C0 218 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Rwdd1Q9CQK7 243 aa19.99■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Rtf1A2AQ19 715 aaKnown RBP19.98■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Nup153E9Q3G8 1462 aaKnown RBP19.98■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Prim1P20664 417 aa19.97■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Pard3Q99NH2 1333 aa19.97■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Ggnbp2Q5SV77 696 aa19.96■□□□□ 0.79
Ddx49-201ENSMUST00000008004 Csrnp3P59055 597 aa19.96■□□□□ 0.79
Ddx49-201ENSMUST00000008004 U2surpQ6NV83 1029 aaKnown RBP19.95■□□□□ 0.78
Ddx49-201ENSMUST00000008004 ThemisQ8BGW0 636 aa19.95■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Lrrc59Q922Q8 307 aaKnown RBP19.95■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Usp16Q99LG0 825 aa19.95■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Rtl5Q5DTT4 599 aa19.94■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Pak3Q61036 559 aa19.94■□□□□ 0.78
Ddx49-201ENSMUST00000008004 NudcO35685 332 aaKnown RBP19.94■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Aox2Q5SGK3 1345 aa19.93■□□□□ 0.78
Ddx49-201ENSMUST00000008004 Nkx2-3P97334 362 aa19.93■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms