RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 USP49Q70CQ1 688 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 RUFY3Q7L099 469 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 HSCBQ8IWL3 235 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 LEO1Q8WVC0 666 aaPredicted RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 CNDP2Q96KP4 475 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 ZNF560Q96MR9 790 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 XPO6Q96QU8 1125 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 ACOX2Q99424 681 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 SH3GL3Q99963 347 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 ACBD6Q9BR61 282 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 TRIM56Q9BRZ2 755 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 NUP58Q9BVL2 599 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 TRIM4Q9C037 500 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 RNF38Q9H0F5 515 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 TMEM60Q9H2L4 133 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 CPNE5Q9HCH3 593 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 ITM2CQ9NQX7 267 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 DDX43Q9NXZ2 648 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 DPP3Q9NY33 737 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 KLHL42Q9P2K6 505 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 RSPH14Q9UHP6 348 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 GTF3C4Q9UKN8 822 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 DNM3Q9UQ16 869 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 ANKRD6Q9Y2G4 727 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 DERAQ9Y315 318 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 SNX11Q9Y5W9 270 aa5.76□□□□□ -1.49
CHKA-204ENST00000528235 NYNRINQ9P2P1 1898 aaKnown RBP5.76□□□□□ -1.49
CHKA-204ENST00000528235 E9PMD0 336 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 GFRA2O00451 464 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 LAD1O00515 517 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 HNRNPDLO14979 420 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 PCDHGA12O60330 932 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 DFNA5O60443 496 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 OR52Z1P0C646 297 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 MSL3P1P0C860 447 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ABCB4P21439 1286 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 GLDCP23378 1020 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ACAT1P24752 427 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 MSNP26038 577 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 PNPLA4P41247 253 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 NUCB2P80303 420 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 IL9RQ01113 521 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 IFRD2Q12894 506 aaPredicted RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 DNAJC3Q13217 504 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TOB2Q14106 344 aaPredicted RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 TRIM29Q14134 588 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 BECN1Q14457 450 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ECM1Q16610 540 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 CFAP221Q4G0U5 840 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ZNF394Q53GI3 561 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 OGFOD2Q6N063 350 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 RINT1Q6NUQ1 792 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ZNF574Q6ZN55 896 aaPredicted RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 ZNF662Q6ZS27 426 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TRIM74Q86UV6 250 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TRIM73Q86UV7 250 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 MIB1Q86YT6 1006 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TMEM86AQ8N2M4 240 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TMEM161BQ8NDZ6 487 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 PRCCQ92733 491 aaPredicted RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 IGSF8Q969P0 613 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 MISP3Q96FF7 219 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 SIPA1Q96FS4 1042 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 FUBP3Q96I24 572 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHKA-204ENST00000528235 SLITRK1Q96PX8 696 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 CITED4Q96RK1 184 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 GABRG3Q99928 467 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 MSTO1Q9BUK6 570 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 TIPINQ9BVW5 301 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 CCSER1Q9C0I3 900 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 HAPLN2Q9GZV7 340 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ASB7Q9H672 318 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 SPHK2Q9NRA0 654 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 C1GALT1Q9NS00 363 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 DNAJC17Q9NVM6 304 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 ORC3Q9UBD5 711 aaPredicted RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 LRWD1Q9UFC0 647 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 ACAD8Q9UKU7 415 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 NOL7Q9UMY1 257 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 CLCA2Q9UQC9 943 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 R3HCC1Q9Y3T6 440 aaKnown RBP5.75□□□□□ -1.49
CHKA-204ENST00000528235 CYP46A1Q9Y6A2 500 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 IKBKGQ9Y6K9 419 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 MYO9AB2RTY4 2548 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 FLNCQ14315 2725 aa5.75□□□□□ -1.49
CHKA-204ENST00000528235 SPTAN1Q13813 2472 aaKnown RBP5.74□□□□□ -1.49
CHKA-204ENST00000528235 ZNF840PA6NDX5 716 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 KCNJ18B7U540 433 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 WASH3PC4AMC7 463 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 NEDD8-MDP1E9PL57 170 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 H0Y8X5 98 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 BIN1O00499 593 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 TRIM24O15164 1050 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 KLK10O43240 276 aa5.74□□□□□ -1.49
CHKA-204ENST00000528235 HOXC11O43248 304 aaPredicted RBP5.74□□□□□ -1.49
CHKA-204ENST00000528235 SYNCRIPO60506 623 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms